Protein ID | Hirsu2|4683 |
Gene name | |
Location | Contig_237:24363..26865 |
Strand | + |
Gene length (bp) | 2502 |
Transcript length (bp) | 1995 |
Coding sequence length (bp) | 1995 |
Protein length (aa) | 665 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 19 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 137 | 159 | 22 |
2 | 169 | 186 | 17 |
3 | 230 | 252 | 22 |
4 | 262 | 284 | 22 |
5 | 297 | 319 | 22 |
6 | 329 | 351 | 22 |
7 | 364 | 386 | 22 |
8 | 550 | 572 | 22 |
9 | 579 | 601 | 22 |
10 | 611 | 633 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|4683 MWSSKLCNPLLSPSTATGESERDMEKQPDEDRQPQSMASSSTMSSSSSSEQQPAPKLRIFASPLVRRPGVDAGKA SSHDGLDGFDDRVVPPEDGMPEFKRYQEPTLLEIFFDLFFAANYNVFSETQKVTNHARFKAYVGYFCLLWLTWFL VTLFDVRYVTDSIFSRLMRAVQLGVLVGFVVVAPHFDPTHQKATTMRAMSLILCVSRATLAIEYGSTLLHLRRYK KARRPIYLQIGLHVVAAAVYLGIAFRFREEERSRIYMTWYFFSGGEAILSLLLSNLSPVLSLTHTHLMKRIALLT VMILGDGVVQVAKEVVIIVKKPSAWDSATIGLITAAAATIYFMFLIYFDWMRARFHLPALRQQLWVGLHLALHLA LVLHLHVFSQWILWYKIWSRFDGIADFADPSDEPGIGNSTSQQVADRLEGSIRDFFGDFKPSQPDTMQIIDSALA NISSMPDAFWPVVKQAQDSPGSEYYDVFDRAGFVDVWEDYYTAFLAIVATLDSSLFSAYEIDLDQDDIKKKEVRS PDDEQSGLWQVAIPEKGFDRCRLAFAYGYVSAGVTIFLLATLLIILRTLPRKVWPLIRLAIIYALALGTGLVALL WFNETLLEAFLTGPWVLPTLTLVWGTMLVLTHINGEGVKRNKHRFTAINHTVGRLAHRRNEAFR* |
Coding | >Hirsu2|4683 ATGTGGTCGTCGAAGCTGTGCAACCCGCTTCTCTCGCCATCGACCGCCACCGGCGAGAGCGAGCGGGACATGGAG AAGCAGCCGGACGAGGACCGGCAGCCGCAAAGCATGGCGTCATCTTCGACCATGTCGTCGTCGTCGTCGTCGGAG CAGCAGCCGGCGCCGAAGCTGCGCATCTTCGCCAGCCCGCTCGTGCGCCGGCCCGGCGTCGACGCCGGCAAGGCC AGCAGCCACGACGGCCTCGACGGCTTCGACGATCGAGTCGTCCCGCCCGAGGACGGCATGCCCGAGTTCAAGCGC TACCAGGAGCCGACCCTGCTGGAGATCTTCTTCGACCTGTTCTTCGCCGCCAACTACAACGTCTTCTCCGAGACG CAAAAGGTGACGAACCACGCGCGCTTCAAGGCCTACGTCGGATACTTCTGCCTGCTGTGGTTGACCTGGTTTCTC GTCACGCTCTTCGACGTCCGCTACGTCACCGATAGCATCTTCTCCCGACTGATGCGGGCCGTCCAGCTGGGCGTG CTGGTCGGCTTCGTCGTCGTCGCGCCTCACTTCGATCCGACGCACCAGAAGGCGACGACGATGCGAGCCATGTCC CTCATCCTCTGCGTCTCGCGCGCGACGCTGGCCATCGAGTACGGCAGCACGCTGCTGCACCTCCGGCGCTATAAA AAGGCCCGGCGCCCGATCTACCTGCAGATCGGCCTGCACGTCGTCGCGGCGGCCGTCTACCTCGGCATCGCCTTT CGCTTCCGTGAGGAGGAGCGCAGCCGGATCTACATGACCTGGTACTTCTTCTCGGGCGGCGAGGCCATCCTCAGC CTGCTGCTGTCCAACCTGTCGCCCGTGCTCAGCCTGACGCACACGCACCTGATGAAGCGGATCGCGCTGCTGACC GTCATGATCCTCGGTGATGGCGTCGTCCAGGTGGCCAAGGAGGTCGTCATCATCGTCAAGAAGCCGTCGGCCTGG GACTCGGCCACCATCGGCCTCATCACGGCCGCGGCCGCAACCATCTACTTCATGTTCCTCATCTACTTCGACTGG ATGCGGGCGCGCTTCCACCTGCCGGCGCTGCGGCAGCAGCTCTGGGTCGGGCTGCATCTGGCGCTGCACCTGGCG CTGGTGCTGCACCTGCACGTCTTCTCGCAGTGGATCCTGTGGTATAAGATCTGGTCGCGCTTCGACGGCATCGCC GACTTCGCCGACCCGTCCGACGAGCCCGGCATCGGCAACTCGACCAGCCAGCAGGTGGCGGACCGTCTCGAGGGC TCCATCCGCGACTTCTTCGGCGACTTCAAGCCCAGCCAGCCGGACACGATGCAGATCATCGACTCCGCCCTCGCC AACATCAGCAGCATGCCCGACGCCTTCTGGCCCGTCGTCAAGCAGGCCCAGGACAGCCCCGGCTCCGAGTACTAC GACGTCTTCGACCGGGCCGGCTTCGTCGACGTCTGGGAGGACTACTATACCGCCTTCCTCGCCATCGTCGCCACC CTCGACAGCTCGCTCTTCTCCGCCTACGAGATCGACCTGGACCAGGACGACATCAAGAAGAAGGAGGTCCGCTCG CCCGACGACGAGCAGAGCGGCCTGTGGCAGGTCGCCATCCCGGAGAAGGGCTTCGACCGCTGCCGCCTCGCCTTT GCCTACGGATACGTCTCCGCCGGCGTCACCATCTTCCTGCTCGCCACCCTGCTCATCATCCTGCGCACGCTGCCG CGCAAGGTCTGGCCCCTGATCCGCCTGGCCATCATCTATGCCTTGGCTCTCGGCACCGGCCTCGTCGCCCTGCTC TGGTTCAACGAGACGCTCCTCGAAGCCTTCCTGACAGGGCCCTGGGTCCTGCCTACCCTCACCCTCGTCTGGGGA ACCATGCTGGTCCTGACCCATATCAACGGCGAGGGCGTCAAGCGGAACAAACACCGCTTCACCGCCATCAACCAC ACCGTCGGACGGCTCGCCCATCGCCGCAACGAAGCCTTTCGATAG |
Transcript | >Hirsu2|4683 ATGTGGTCGTCGAAGCTGTGCAACCCGCTTCTCTCGCCATCGACCGCCACCGGCGAGAGCGAGCGGGACATGGAG AAGCAGCCGGACGAGGACCGGCAGCCGCAAAGCATGGCGTCATCTTCGACCATGTCGTCGTCGTCGTCGTCGGAG CAGCAGCCGGCGCCGAAGCTGCGCATCTTCGCCAGCCCGCTCGTGCGCCGGCCCGGCGTCGACGCCGGCAAGGCC AGCAGCCACGACGGCCTCGACGGCTTCGACGATCGAGTCGTCCCGCCCGAGGACGGCATGCCCGAGTTCAAGCGC TACCAGGAGCCGACCCTGCTGGAGATCTTCTTCGACCTGTTCTTCGCCGCCAACTACAACGTCTTCTCCGAGACG CAAAAGGTGACGAACCACGCGCGCTTCAAGGCCTACGTCGGATACTTCTGCCTGCTGTGGTTGACCTGGTTTCTC GTCACGCTCTTCGACGTCCGCTACGTCACCGATAGCATCTTCTCCCGACTGATGCGGGCCGTCCAGCTGGGCGTG CTGGTCGGCTTCGTCGTCGTCGCGCCTCACTTCGATCCGACGCACCAGAAGGCGACGACGATGCGAGCCATGTCC CTCATCCTCTGCGTCTCGCGCGCGACGCTGGCCATCGAGTACGGCAGCACGCTGCTGCACCTCCGGCGCTATAAA AAGGCCCGGCGCCCGATCTACCTGCAGATCGGCCTGCACGTCGTCGCGGCGGCCGTCTACCTCGGCATCGCCTTT CGCTTCCGTGAGGAGGAGCGCAGCCGGATCTACATGACCTGGTACTTCTTCTCGGGCGGCGAGGCCATCCTCAGC CTGCTGCTGTCCAACCTGTCGCCCGTGCTCAGCCTGACGCACACGCACCTGATGAAGCGGATCGCGCTGCTGACC GTCATGATCCTCGGTGATGGCGTCGTCCAGGTGGCCAAGGAGGTCGTCATCATCGTCAAGAAGCCGTCGGCCTGG GACTCGGCCACCATCGGCCTCATCACGGCCGCGGCCGCAACCATCTACTTCATGTTCCTCATCTACTTCGACTGG ATGCGGGCGCGCTTCCACCTGCCGGCGCTGCGGCAGCAGCTCTGGGTCGGGCTGCATCTGGCGCTGCACCTGGCG CTGGTGCTGCACCTGCACGTCTTCTCGCAGTGGATCCTGTGGTATAAGATCTGGTCGCGCTTCGACGGCATCGCC GACTTCGCCGACCCGTCCGACGAGCCCGGCATCGGCAACTCGACCAGCCAGCAGGTGGCGGACCGTCTCGAGGGC TCCATCCGCGACTTCTTCGGCGACTTCAAGCCCAGCCAGCCGGACACGATGCAGATCATCGACTCCGCCCTCGCC AACATCAGCAGCATGCCCGACGCCTTCTGGCCCGTCGTCAAGCAGGCCCAGGACAGCCCCGGCTCCGAGTACTAC GACGTCTTCGACCGGGCCGGCTTCGTCGACGTCTGGGAGGACTACTATACCGCCTTCCTCGCCATCGTCGCCACC CTCGACAGCTCGCTCTTCTCCGCCTACGAGATCGACCTGGACCAGGACGACATCAAGAAGAAGGAGGTCCGCTCG CCCGACGACGAGCAGAGCGGCCTGTGGCAGGTCGCCATCCCGGAGAAGGGCTTCGACCGCTGCCGCCTCGCCTTT GCCTACGGATACGTCTCCGCCGGCGTCACCATCTTCCTGCTCGCCACCCTGCTCATCATCCTGCGCACGCTGCCG CGCAAGGTCTGGCCCCTGATCCGCCTGGCCATCATCTATGCCTTGGCTCTCGGCACCGGCCTCGTCGCCCTGCTC TGGTTCAACGAGACGCTCCTCGAAGCCTTCCTGACAGGGCCCTGGGTCCTGCCTACCCTCACCCTCGTCTGGGGA ACCATGCTGGTCCTGACCCATATCAACGGCGAGGGCGTCAAGCGGAACAAACACCGCTTCACCGCCATCAACCAC ACCGTCGGACGGCTCGCCCATCGCCGCAACGAAGCCTTTCGATAG |
Gene | >Hirsu2|4683 ATGTGGTCGTCGAAGCTGTGCAACCCGCTTCTCTCGCCATCGACCGCCACCGGCGAGAGCGAGCGGGACATGGAG AAGCAGCCGGACGAGGACCGGCAGCCGCAAAGCATGGCGTCATCTTCGACCATGTCGTCGTCGTCGTCGTCGGAG CAGCAGCCGGCGCCGAAGCTGCGCATCTTCGCCAGCCCGCTCGTGCGCCGGCCCGGCGTCGACGCCGGCAAGGCC AGCAGCCACGACGGCCTCGACGGCTTCGACGATCGAGTCGTCCCGCCCGAGGACGGCATGCCCGAGTTCAAGCGC GTGCGTCTCGCCCTCCCGCCTCCCTTTTCGGCCTGAGTCTCACACGCCGGCGACTGCAGTACCAGGAGCCGACCC TGCTGGAGATCTTCTTCGACCTGTTCTTCGCCGCCAACTACAACGTCTTCTCCGAGACGCAAAAGGTGACGAACC ACGCGCGCTTCAAGGCCTACGTCGGATACTTCTGGTACGCCGCCTCCCGGTCTGCCGCACCCGCTCCCTACCGGA GGGAACTGACACGCGTTGCAGCCTGCTGTGGTTGACCTGGTTTCTCGTCACGCTCTTCGACGTCCGCTACGTCAC CGATAGCATCTTCTGTACGTTATGAGGCCGGCCGCCGCGCCTCGACCTTCAACCGCGATGATGGCTGACGACGGA GAGCGACGCAGCCCGACTGATGCGGGCCGTCCAGCTGGGCGTGCTGGTCGGCTTCGTCGTCGTCGCGCCTCACTT CGATCCGACGCACCAGAAGGCGACGACGATGCGAGCCATGTGTGCGTCCCCCCAGAACAACCCCCTCCCCCCTTT TCTCCTCCTCCACTGACGACTTACATCGCCCTCCTCTCTCTCTGGCTCTCGATCGACAGCCCTCATCCTCTGCGT CTCGCGCGCGACGCTGGCCATCGAGTACGGCAGCACGCTGCTGCACCTCCGGCGCTATAAAAAGGCCCGGCGCCC GATCTACCTGCAGATCGGCCTGCACGTCGTCGCGGCGGCCGTCTACCTCGGCATCGCCTTTCGCTTCCGTGAGGA GGAGCGCAGCCGGATCTACATGACCTGGTACTTCTTCTCGGGCGGCGAGGCCATCCTCAGCCTGCTGCTGTCCAA CCTGTCGCCCGTGCTCAGCCTGACGCACACGCACCTGATGAAGCGGATCGCGCTGCTGACCGTCATGATCCTCGG TGATGGCGTCGTCCAGGTGGCCAAGGAGGTCGTCATCATCGTCAAGAAGCCGTCGGCCTGGGGTAAGCAGCAGCA TCCCCCCCCCTTTTCCGTTCCCCCCCTCCCCCCTTTTCCGCCCCCTTTTTTTTTCTCGCTCGCCTCTCGTACTTG TCTTGTCTTTCTATCCTGTCTTCCGCGGCTCTCAAGAAACCGATGGGCTGAGCACAAATTCATACACGTCACAGA CTCGGCCACCATCGGCCTCATCACGGCCGCGGCCGCAACCATCTACTTCATGTTCCTCATCTACTTCGACTGGAT GCGGGCGCGCTTCCACCTGCCGGCGCTGCGGCAGCAGCTCTGGGTCGGGCTGCATCTGGCGCTGCACCTGGCGCT GGTGCTGCACCTGCACGTCTTCTCGCAGTGGATCCTGTGGTATAAGATCTGGTCGCGCTTCGACGGCATCGCCGA CTTCGCCGACCCGTCCGACGAGCCCGGCATCGGCAACTCGACCAGCCAGCAGGTGGCGGACCGTCTCGAGGGCTC CATCCGCGACTTCTTCGGCGACTTCAAGCCCAGCCAGCCGGACACGATGCAGATCATCGACTCCGCCCTCGCCAA CATCAGCAGCATGCCCGACGCCTTCTGGCCCGTCGTCAAGCAGGCCCAGGACAGCCCCGGCTCCGAGTACTACGA CGTCTTCGACCGGGCCGGCTTCGTCGACGTCTGGGAGGACTACTATACCGCCTTCCTCGCCATCGTCGCCACCCT CGACAGCTCGCTCTTCTCCGCCTACGAGATCGACCTGGACCAGGACGACATCAAGAAGAAGGAGGTCCGCTCGCC CGACGACGAGCAGAGCGGCCTGTGGCAGGTCGCCATCCCGGAGAAGGGCTTCGACCGCTGCCGCCTCGCCGTAAG TCACCGCTTCAACTTTACCTGACCTGCTCGACGAGCTGACGCAGACGGGCTCAGTTTGCCTACGGATACGTCTCC GCCGGCGTCACCATCTTCCTGCTCGCCACCCTGCTCATCATCCTGCGCACGCTGCCGCGCAAGGTCTGGCCCCTG ATCCGCCTGGCCATCATCTATGCCTTGGCTCTCGGCACCGGCCTCGTCGCCCTGCTCTGGTTCAACGAGACGCTC CTCGAAGCCTTCCTGACAGGGCCCTGGGTCCTGCCTACCCTCACCCTCGTCTGGGGAACCATGCTGGTCCTGACC CATATCAACGGCGAGGGCGTCAAGCGGAACAAACACCGCTTCACCGCCATCAACCACACCGTCGGACGGCTCGCC CATCGCCGCAACGAAGCCTTTCGATAG |