Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4679
Gene name
LocationContig_237:13415..14984
Strand-
Gene length (bp)1569
Transcript length (bp)1569
Coding sequence length (bp)1569
Protein length (aa) 523

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13520 AA_permease_2 Amino acid permease 3.7E-47 50 490
PF00324 AA_permease Amino acid permease 1.1E-24 46 501

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P19807|HNM1_YEAST Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 1 508 1.0E-71
sp|Q9US40|YFZ1_SCHPO Uncharacterized amino-acid permease C1039.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.01 PE=3 SV=1 9 514 4.0E-44
sp|Q09887|YC9D_SCHPO Uncharacterized amino-acid permease C584.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC584.13 PE=3 SV=1 4 515 3.0E-39
sp|O60113|YG64_SCHPO Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 3 510 2.0E-35
sp|Q9ZU50|BAT1_ARATH Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 18 510 5.0E-35
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Swissprot ID Swissprot Description Start End E-value
sp|P19807|HNM1_YEAST Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 1 508 1.0E-71
sp|Q9US40|YFZ1_SCHPO Uncharacterized amino-acid permease C1039.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.01 PE=3 SV=1 9 514 4.0E-44
sp|Q09887|YC9D_SCHPO Uncharacterized amino-acid permease C584.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC584.13 PE=3 SV=1 4 515 3.0E-39
sp|O60113|YG64_SCHPO Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 3 510 2.0E-35
sp|Q9ZU50|BAT1_ARATH Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 18 510 5.0E-35
sp|O74537|YCQ4_SCHPO Uncharacterized amino-acid permease C74.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC74.04 PE=3 SV=1 3 510 1.0E-34
sp|B9EXZ6|BAT1_ORYSJ Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 27 516 2.0E-32
sp|P53744|BIO5_YEAST 7-keto 8-aminopelargonic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BIO5 PE=1 SV=1 13 497 1.0E-28
sp|P32837|UGA4_YEAST GABA-specific permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UGA4 PE=1 SV=1 16 513 2.0E-27
sp|P36029|TPO5_YEAST Polyamine transporter TPO5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO5 PE=1 SV=1 23 522 4.0E-27
sp|O59942|AAP2_NEUCR Amino-acid permease 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aap-2 PE=2 SV=2 27 514 2.0E-26
sp|O74248|GPT1_CANAX Putative polyamine transporter OS=Candida albicans GN=GPT1 PE=3 SV=1 14 512 3.0E-25
sp|O59813|YCT3_SCHPO Uncharacterized amino-acid permease C794.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.03 PE=2 SV=1 24 500 1.0E-24
sp|Q9UT18|THI9_SCHPO Thiamine transporter thi9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thi9 PE=1 SV=1 9 493 4.0E-20
sp|Q9C0Z0|YKM2_SCHPO Uncharacterized amino-acid permease PB24D3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.02c PE=3 SV=1 3 513 3.0E-19
sp|Q10087|YAO8_SCHPO Uncharacterized amino-acid permease C11D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.08c PE=3 SV=1 5 386 5.0E-18
sp|Q9WVR6|LAT2_RAT Large neutral amino acids transporter small subunit 2 OS=Rattus norvegicus GN=Slc7a8 PE=1 SV=1 4 401 1.0E-08
sp|Q9N1Q4|LAT2_RABIT Large neutral amino acids transporter small subunit 2 OS=Oryctolagus cuniculus GN=SLC7A8 PE=1 SV=1 1 401 7.0E-07
sp|Q92536|YLAT2_HUMAN Y+L amino acid transporter 2 OS=Homo sapiens GN=SLC7A6 PE=1 SV=3 10 289 7.0E-07
sp|Q9QXW9|LAT2_MOUSE Large neutral amino acids transporter small subunit 2 OS=Mus musculus GN=Slc7a8 PE=1 SV=1 21 470 3.0E-06
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0016020 membrane Yes
GO:0008150 biological_process No
GO:0006810 transport No
GO:0051234 establishment of localization No
GO:0003674 molecular_function No
GO:0051179 localization No
GO:0005575 cellular_component No
GO:0005215 transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 70 0.5

Transmembrane Domains

Domain # Start End Length
1 46 68 22
2 88 110 22
3 131 153 22
4 168 190 22
5 197 219 22
6 246 268 22
7 281 303 22
8 330 352 22
9 384 406 22
10 411 433 22
11 446 468 22
12 483 502 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4679
MAKNKSHDKKPAVVDRHVDSGAGSQQEADINASGHVQELRRSFSLLSLAGIGLVVGNVWPAIGGSILVAIFNGGP
PGVLYEYVAVSVCYWNVAASIAELASAMPSSAGVYHWASVIPGKRWGRPVGFVAGWWNYFAWILGAASMTSILGN
TIVQMYAATRPAFVAKSWHVFIVYLAATWLACLAVCLANRAMPAMQLFACFAIVAFFVVTVVVVTVMPALPGHPG
HASSAFVWTEWTAAMGYPDGFVFVAGMLNGAYGVGAVDAITHLAEEIPRPERNVPIALALQVSIGFVTGFAYLVA
ILYATRDLGALRNSAYPIAEIYRQATGSGAGVAGLLSLIMICIAFTVLGLHITCGRTLWTLARDGASPFPHTLAQ
THSRLQIPVNATLVSAALMTALGAIYVGSATAFNALVGSFVLLSSSSYLACIVPHLLTRRNNIPYGPFKLRGALG
FIVNSIASLYMLVWAVIYCFPSALPTDAQNMNYTSVIWGGLTIVIALFWIIVSNRGYRGPTTTSGGFPIPTS*
Coding >Hirsu2|4679
ATGGCGAAGAACAAGAGTCACGACAAGAAGCCGGCCGTCGTCGACCGGCATGTCGACTCCGGCGCCGGATCCCAG
CAGGAGGCGGACATCAACGCATCCGGCCACGTCCAGGAACTGCGCCGCAGCTTCAGCCTGCTCTCGCTGGCGGGC
ATCGGCCTCGTCGTCGGCAACGTCTGGCCCGCCATCGGCGGCTCCATCCTCGTCGCCATCTTCAACGGCGGGCCG
CCCGGCGTCCTGTACGAGTACGTCGCCGTCTCCGTCTGCTACTGGAACGTCGCCGCCAGCATCGCCGAGCTGGCC
AGCGCCATGCCCTCCTCCGCCGGCGTCTACCACTGGGCCTCGGTCATCCCCGGCAAGCGCTGGGGCCGCCCCGTC
GGCTTCGTGGCCGGCTGGTGGAACTACTTCGCCTGGATCCTCGGCGCCGCCAGCATGACGTCCATTCTGGGCAAC
ACCATCGTGCAGATGTACGCGGCCACGCGCCCGGCCTTTGTGGCCAAGTCCTGGCACGTCTTCATCGTCTACCTG
GCCGCCACCTGGCTGGCCTGCTTGGCCGTCTGTCTCGCGAACCGCGCCATGCCCGCCATGCAGCTGTTTGCCTGC
TTTGCCATCGTGGCCTTCTTCGTCGTCACCGTCGTCGTCGTGACGGTGATGCCGGCCTTGCCGGGGCACCCGGGG
CATGCCTCATCGGCTTTTGTGTGGACCGAGTGGACCGCTGCGATGGGCTATCCGGACGGTTTCGTCTTCGTCGCC
GGCATGCTCAACGGCGCTTACGGCGTCGGGGCCGTCGACGCCATCACGCACCTGGCCGAGGAGATCCCCCGTCCG
GAGCGCAATGTCCCCATCGCCTTGGCCCTGCAGGTCTCGATAGGCTTCGTCACCGGCTTCGCCTACCTGGTGGCC
ATCTTGTATGCCACCCGCGACTTGGGCGCGCTGCGAAACTCTGCCTACCCCATCGCCGAGATCTACAGACAGGCC
ACGGGCTCGGGAGCCGGCGTCGCGGGCCTGCTGTCGCTGATCATGATCTGCATCGCCTTCACCGTCCTGGGCCTG
CACATCACGTGTGGACGAACCCTGTGGACGCTTGCCCGCGACGGCGCCTCTCCCTTCCCGCACACTCTTGCGCAG
ACGCACTCGCGGCTCCAGATTCCGGTCAATGCGACGCTCGTGTCCGCCGCGCTTATGACCGCTCTAGGTGCCATT
TACGTCGGCAGCGCGACCGCCTTCAACGCCCTCGTCGGCAGCTTCGTTCTGCTGTCGAGTAGCTCATACTTGGCC
TGCATCGTGCCCCATCTGCTGACGAGGCGGAACAACATACCCTACGGCCCGTTCAAGCTGCGCGGGGCCCTAGGC
TTCATCGTCAATTCAATCGCTTCTCTCTACATGCTGGTCTGGGCTGTCATTTATTGTTTCCCGTCGGCGCTGCCC
ACCGACGCGCAGAACATGAACTACACCAGCGTTATATGGGGCGGCCTGACCATAGTCATTGCTCTGTTTTGGATC
ATCGTCTCGAATAGGGGTTATCGGGGCCCGACAACAACCAGCGGCGGCTTTCCAATTCCAACGTCCTGA
Transcript >Hirsu2|4679
ATGGCGAAGAACAAGAGTCACGACAAGAAGCCGGCCGTCGTCGACCGGCATGTCGACTCCGGCGCCGGATCCCAG
CAGGAGGCGGACATCAACGCATCCGGCCACGTCCAGGAACTGCGCCGCAGCTTCAGCCTGCTCTCGCTGGCGGGC
ATCGGCCTCGTCGTCGGCAACGTCTGGCCCGCCATCGGCGGCTCCATCCTCGTCGCCATCTTCAACGGCGGGCCG
CCCGGCGTCCTGTACGAGTACGTCGCCGTCTCCGTCTGCTACTGGAACGTCGCCGCCAGCATCGCCGAGCTGGCC
AGCGCCATGCCCTCCTCCGCCGGCGTCTACCACTGGGCCTCGGTCATCCCCGGCAAGCGCTGGGGCCGCCCCGTC
GGCTTCGTGGCCGGCTGGTGGAACTACTTCGCCTGGATCCTCGGCGCCGCCAGCATGACGTCCATTCTGGGCAAC
ACCATCGTGCAGATGTACGCGGCCACGCGCCCGGCCTTTGTGGCCAAGTCCTGGCACGTCTTCATCGTCTACCTG
GCCGCCACCTGGCTGGCCTGCTTGGCCGTCTGTCTCGCGAACCGCGCCATGCCCGCCATGCAGCTGTTTGCCTGC
TTTGCCATCGTGGCCTTCTTCGTCGTCACCGTCGTCGTCGTGACGGTGATGCCGGCCTTGCCGGGGCACCCGGGG
CATGCCTCATCGGCTTTTGTGTGGACCGAGTGGACCGCTGCGATGGGCTATCCGGACGGTTTCGTCTTCGTCGCC
GGCATGCTCAACGGCGCTTACGGCGTCGGGGCCGTCGACGCCATCACGCACCTGGCCGAGGAGATCCCCCGTCCG
GAGCGCAATGTCCCCATCGCCTTGGCCCTGCAGGTCTCGATAGGCTTCGTCACCGGCTTCGCCTACCTGGTGGCC
ATCTTGTATGCCACCCGCGACTTGGGCGCGCTGCGAAACTCTGCCTACCCCATCGCCGAGATCTACAGACAGGCC
ACGGGCTCGGGAGCCGGCGTCGCGGGCCTGCTGTCGCTGATCATGATCTGCATCGCCTTCACCGTCCTGGGCCTG
CACATCACGTGTGGACGAACCCTGTGGACGCTTGCCCGCGACGGCGCCTCTCCCTTCCCGCACACTCTTGCGCAG
ACGCACTCGCGGCTCCAGATTCCGGTCAATGCGACGCTCGTGTCCGCCGCGCTTATGACCGCTCTAGGTGCCATT
TACGTCGGCAGCGCGACCGCCTTCAACGCCCTCGTCGGCAGCTTCGTTCTGCTGTCGAGTAGCTCATACTTGGCC
TGCATCGTGCCCCATCTGCTGACGAGGCGGAACAACATACCCTACGGCCCGTTCAAGCTGCGCGGGGCCCTAGGC
TTCATCGTCAATTCAATCGCTTCTCTCTACATGCTGGTCTGGGCTGTCATTTATTGTTTCCCGTCGGCGCTGCCC
ACCGACGCGCAGAACATGAACTACACCAGCGTTATATGGGGCGGCCTGACCATAGTCATTGCTCTGTTTTGGATC
ATCGTCTCGAATAGGGGTTATCGGGGCCCGACAACAACCAGCGGCGGCTTTCCAATTCCAACGTCCTGA
Gene >Hirsu2|4679
ATGGCGAAGAACAAGAGTCACGACAAGAAGCCGGCCGTCGTCGACCGGCATGTCGACTCCGGCGCCGGATCCCAG
CAGGAGGCGGACATCAACGCATCCGGCCACGTCCAGGAACTGCGCCGCAGCTTCAGCCTGCTCTCGCTGGCGGGC
ATCGGCCTCGTCGTCGGCAACGTCTGGCCCGCCATCGGCGGCTCCATCCTCGTCGCCATCTTCAACGGCGGGCCG
CCCGGCGTCCTGTACGAGTACGTCGCCGTCTCCGTCTGCTACTGGAACGTCGCCGCCAGCATCGCCGAGCTGGCC
AGCGCCATGCCCTCCTCCGCCGGCGTCTACCACTGGGCCTCGGTCATCCCCGGCAAGCGCTGGGGCCGCCCCGTC
GGCTTCGTGGCCGGCTGGTGGAACTACTTCGCCTGGATCCTCGGCGCCGCCAGCATGACGTCCATTCTGGGCAAC
ACCATCGTGCAGATGTACGCGGCCACGCGCCCGGCCTTTGTGGCCAAGTCCTGGCACGTCTTCATCGTCTACCTG
GCCGCCACCTGGCTGGCCTGCTTGGCCGTCTGTCTCGCGAACCGCGCCATGCCCGCCATGCAGCTGTTTGCCTGC
TTTGCCATCGTGGCCTTCTTCGTCGTCACCGTCGTCGTCGTGACGGTGATGCCGGCCTTGCCGGGGCACCCGGGG
CATGCCTCATCGGCTTTTGTGTGGACCGAGTGGACCGCTGCGATGGGCTATCCGGACGGTTTCGTCTTCGTCGCC
GGCATGCTCAACGGCGCTTACGGCGTCGGGGCCGTCGACGCCATCACGCACCTGGCCGAGGAGATCCCCCGTCCG
GAGCGCAATGTCCCCATCGCCTTGGCCCTGCAGGTCTCGATAGGCTTCGTCACCGGCTTCGCCTACCTGGTGGCC
ATCTTGTATGCCACCCGCGACTTGGGCGCGCTGCGAAACTCTGCCTACCCCATCGCCGAGATCTACAGACAGGCC
ACGGGCTCGGGAGCCGGCGTCGCGGGCCTGCTGTCGCTGATCATGATCTGCATCGCCTTCACCGTCCTGGGCCTG
CACATCACGTGTGGACGAACCCTGTGGACGCTTGCCCGCGACGGCGCCTCTCCCTTCCCGCACACTCTTGCGCAG
ACGCACTCGCGGCTCCAGATTCCGGTCAATGCGACGCTCGTGTCCGCCGCGCTTATGACCGCTCTAGGTGCCATT
TACGTCGGCAGCGCGACCGCCTTCAACGCCCTCGTCGGCAGCTTCGTTCTGCTGTCGAGTAGCTCATACTTGGCC
TGCATCGTGCCCCATCTGCTGACGAGGCGGAACAACATACCCTACGGCCCGTTCAAGCTGCGCGGGGCCCTAGGC
TTCATCGTCAATTCAATCGCTTCTCTCTACATGCTGGTCTGGGCTGTCATTTATTGTTTCCCGTCGGCGCTGCCC
ACCGACGCGCAGAACATGAACTACACCAGCGTTATATGGGGCGGCCTGACCATAGTCATTGCTCTGTTTTGGATC
ATCGTCTCGAATAGGGGTTATCGGGGCCCGACAACAACCAGCGGCGGCTTTCCAATTCCAACGTCCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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