Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4665
Gene name
LocationContig_236:25522..26362
Strand-
Gene length (bp)840
Transcript length (bp)726
Coding sequence length (bp)726
Protein length (aa) 242

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular|Cell membrane 0.0818 0.0596 0.7704 0.6006 0.0778 0.0018 0.2991 0.1076 0.1415 0.0029

SignalP

SignalP signal predicted Location Score
Yes 1 - 17 0.999743

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup854
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6674
Ophiocordyceps australis map64 (Brazil) OphauB2|4345
Ophiocordyceps camponoti-floridani Ophcf2|00309
Ophiocordyceps camponoti-rufipedis Ophun1|1838
Ophiocordyceps camponoti-rufipedis Ophun1|2514
Ophiocordyceps kimflemingae Ophio5|1373
Ophiocordyceps subramaniannii Hirsu2|4665 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4665
MKYSAVALAALVAAAQAKPKFLDTEEVFQNMKTGANAIKYGDCESGCTITLQSSKDGGVTFDPLPGVAPINAPGA
DGTATLTLTGSEPKNLALKIDLVDKKGRIADETSNYSTKFVYAQGSDAAPSAATSAAPATTGAGQTSTAATSAAT
TAAQSLVSTSSATSSATSSASDSDESSTASSSAAPRSSSLSTAARNATATTSSGSRQTTAASTQVPTSGVGHVSA
SLALVGAALAALAYLN*
Coding >Hirsu2|4665
ATGAAGTACTCCGCTGTCGCCCTCGCGGCCCTGGTCGCTGCCGCCCAGGCCAAGCCCAAGTTCCTCGACACCGAG
GAAGTCTTCCAGAACATGAAGACGGGTGCCAACGCCATCAAGTACGGCGACTGCGAGTCCGGCTGCACCATCACC
CTCCAGAGCAGCAAGGACGGCGGCGTCACCTTCGACCCGCTCCCGGGCGTGGCCCCCATTAACGCCCCTGGCGCC
GACGGCACCGCCACCCTGACCCTGACCGGCTCCGAGCCCAAGAACCTGGCCCTGAAGATCGACCTCGTCGACAAG
AAGGGCCGCATCGCGGATGAGACGTCCAACTACAGCACCAAGTTCGTCTACGCCCAGGGCTCCGACGCCGCGCCC
TCGGCTGCCACGTCGGCCGCGCCCGCCACCACCGGGGCGGGCCAGACGTCGACTGCCGCCACCTCGGCCGCCACC
ACGGCTGCCCAGTCGCTGGTGTCGACCAGCTCGGCCACCAGCTCGGCCACCAGCTCTGCCAGCGACTCGGATGAG
TCGTCGACCGCCTCGTCCTCGGCGGCTCCCCGCTCCTCGTCGCTGAGCACCGCCGCCCGCAACGCCACCGCCACC
ACCTCGTCGGGCTCCCGGCAGACGACGGCGGCCTCGACGCAGGTCCCGACCAGCGGCGTCGGCCACGTCTCCGCC
TCGCTGGCCCTGGTCGGCGCTGCCCTGGCCGCCCTGGCCTACCTCAACTAA
Transcript >Hirsu2|4665
ATGAAGTACTCCGCTGTCGCCCTCGCGGCCCTGGTCGCTGCCGCCCAGGCCAAGCCCAAGTTCCTCGACACCGAG
GAAGTCTTCCAGAACATGAAGACGGGTGCCAACGCCATCAAGTACGGCGACTGCGAGTCCGGCTGCACCATCACC
CTCCAGAGCAGCAAGGACGGCGGCGTCACCTTCGACCCGCTCCCGGGCGTGGCCCCCATTAACGCCCCTGGCGCC
GACGGCACCGCCACCCTGACCCTGACCGGCTCCGAGCCCAAGAACCTGGCCCTGAAGATCGACCTCGTCGACAAG
AAGGGCCGCATCGCGGATGAGACGTCCAACTACAGCACCAAGTTCGTCTACGCCCAGGGCTCCGACGCCGCGCCC
TCGGCTGCCACGTCGGCCGCGCCCGCCACCACCGGGGCGGGCCAGACGTCGACTGCCGCCACCTCGGCCGCCACC
ACGGCTGCCCAGTCGCTGGTGTCGACCAGCTCGGCCACCAGCTCGGCCACCAGCTCTGCCAGCGACTCGGATGAG
TCGTCGACCGCCTCGTCCTCGGCGGCTCCCCGCTCCTCGTCGCTGAGCACCGCCGCCCGCAACGCCACCGCCACC
ACCTCGTCGGGCTCCCGGCAGACGACGGCGGCCTCGACGCAGGTCCCGACCAGCGGCGTCGGCCACGTCTCCGCC
TCGCTGGCCCTGGTCGGCGCTGCCCTGGCCGCCCTGGCCTACCTCAACTAA
Gene >Hirsu2|4665
ATGAAGTACTCCGCTGTCGCCCTCGCGGCCCTGGTCGCTGCCGCCCAGGCCAAGCCCAAGTTCCTCGACACCGAG
GAAGTCTTCCAGAACATGAAGACGGGTGCCAACGCCATCAAGTACGGCGACTGCGAGTCCGGCTGCACCATCACC
CTCCAGAGCAGCAAGGACGGCGGCGTCACCTTCGACCCGCTCCCGGGCGTGGCCCGTACGTCCCGCCTACCCCCA
TCGTCGTCCCGTCTGCTGACCCTTCATCTCCCGCAGCCATTAACGCCCCTGGCGCCGACGGCACCGCCACCCTGA
CCCTGACCGGCTCCGAGCCCAAGAACCTGGCCCTGAAGATCGACCTCGTCGACAAGAAGGGCCGCATCGCGGATG
AGACGTCCAACTACAGCACCAAGTTCGTCTACGCCCAGGGCTCCGACGCCGCGCCCTCGGCTGCCACGTCGGCCG
CGCCCGCCACCACCGGGGCGGGCCAGACGTCGACTGCCGCCACCTCGGCCGCCACCACGGCTGCCCAGTCGCTGG
TGTCGACCAGCTCGGCCACCAGCTCGGCCACCAGCTCTGCCAGCGACTCGGATGAGTCGTCGACCGCCTCGTCCT
CGGCGGCTCCCCGCTCCTCGTCGCTGAGCACCGCCGCCCGCAACGCCACCGCCACCAGTAGGTTCTTTCCCCTCG
GCCCCGTCGTGGGAATCTCCGGCTGACTCGCGTGAACCAGCCTCGTCGGGCTCCCGGCAGACGACGGCGGCCTCG
ACGCAGGTCCCGACCAGCGGCGTCGGCCACGTCTCCGCCTCGCTGGCCCTGGTCGGCGCTGCCCTGGCCGCCCTG
GCCTACCTCAACTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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