Protein ID | Hirsu2|4665 |
Gene name | |
Location | Contig_236:25522..26362 |
Strand | - |
Gene length (bp) | 840 |
Transcript length (bp) | 726 |
Coding sequence length (bp) | 726 |
Protein length (aa) | 242 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular|Cell membrane | 0.0818 | 0.0596 | 0.7704 | 0.6006 | 0.0778 | 0.0018 | 0.2991 | 0.1076 | 0.1415 | 0.0029 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 17 | 0.999743 |
Orthofinder run ID | 4 |
Orthogroup | 854 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|4665 MKYSAVALAALVAAAQAKPKFLDTEEVFQNMKTGANAIKYGDCESGCTITLQSSKDGGVTFDPLPGVAPINAPGA DGTATLTLTGSEPKNLALKIDLVDKKGRIADETSNYSTKFVYAQGSDAAPSAATSAAPATTGAGQTSTAATSAAT TAAQSLVSTSSATSSATSSASDSDESSTASSSAAPRSSSLSTAARNATATTSSGSRQTTAASTQVPTSGVGHVSA SLALVGAALAALAYLN* |
Coding | >Hirsu2|4665 ATGAAGTACTCCGCTGTCGCCCTCGCGGCCCTGGTCGCTGCCGCCCAGGCCAAGCCCAAGTTCCTCGACACCGAG GAAGTCTTCCAGAACATGAAGACGGGTGCCAACGCCATCAAGTACGGCGACTGCGAGTCCGGCTGCACCATCACC CTCCAGAGCAGCAAGGACGGCGGCGTCACCTTCGACCCGCTCCCGGGCGTGGCCCCCATTAACGCCCCTGGCGCC GACGGCACCGCCACCCTGACCCTGACCGGCTCCGAGCCCAAGAACCTGGCCCTGAAGATCGACCTCGTCGACAAG AAGGGCCGCATCGCGGATGAGACGTCCAACTACAGCACCAAGTTCGTCTACGCCCAGGGCTCCGACGCCGCGCCC TCGGCTGCCACGTCGGCCGCGCCCGCCACCACCGGGGCGGGCCAGACGTCGACTGCCGCCACCTCGGCCGCCACC ACGGCTGCCCAGTCGCTGGTGTCGACCAGCTCGGCCACCAGCTCGGCCACCAGCTCTGCCAGCGACTCGGATGAG TCGTCGACCGCCTCGTCCTCGGCGGCTCCCCGCTCCTCGTCGCTGAGCACCGCCGCCCGCAACGCCACCGCCACC ACCTCGTCGGGCTCCCGGCAGACGACGGCGGCCTCGACGCAGGTCCCGACCAGCGGCGTCGGCCACGTCTCCGCC TCGCTGGCCCTGGTCGGCGCTGCCCTGGCCGCCCTGGCCTACCTCAACTAA |
Transcript | >Hirsu2|4665 ATGAAGTACTCCGCTGTCGCCCTCGCGGCCCTGGTCGCTGCCGCCCAGGCCAAGCCCAAGTTCCTCGACACCGAG GAAGTCTTCCAGAACATGAAGACGGGTGCCAACGCCATCAAGTACGGCGACTGCGAGTCCGGCTGCACCATCACC CTCCAGAGCAGCAAGGACGGCGGCGTCACCTTCGACCCGCTCCCGGGCGTGGCCCCCATTAACGCCCCTGGCGCC GACGGCACCGCCACCCTGACCCTGACCGGCTCCGAGCCCAAGAACCTGGCCCTGAAGATCGACCTCGTCGACAAG AAGGGCCGCATCGCGGATGAGACGTCCAACTACAGCACCAAGTTCGTCTACGCCCAGGGCTCCGACGCCGCGCCC TCGGCTGCCACGTCGGCCGCGCCCGCCACCACCGGGGCGGGCCAGACGTCGACTGCCGCCACCTCGGCCGCCACC ACGGCTGCCCAGTCGCTGGTGTCGACCAGCTCGGCCACCAGCTCGGCCACCAGCTCTGCCAGCGACTCGGATGAG TCGTCGACCGCCTCGTCCTCGGCGGCTCCCCGCTCCTCGTCGCTGAGCACCGCCGCCCGCAACGCCACCGCCACC ACCTCGTCGGGCTCCCGGCAGACGACGGCGGCCTCGACGCAGGTCCCGACCAGCGGCGTCGGCCACGTCTCCGCC TCGCTGGCCCTGGTCGGCGCTGCCCTGGCCGCCCTGGCCTACCTCAACTAA |
Gene | >Hirsu2|4665 ATGAAGTACTCCGCTGTCGCCCTCGCGGCCCTGGTCGCTGCCGCCCAGGCCAAGCCCAAGTTCCTCGACACCGAG GAAGTCTTCCAGAACATGAAGACGGGTGCCAACGCCATCAAGTACGGCGACTGCGAGTCCGGCTGCACCATCACC CTCCAGAGCAGCAAGGACGGCGGCGTCACCTTCGACCCGCTCCCGGGCGTGGCCCGTACGTCCCGCCTACCCCCA TCGTCGTCCCGTCTGCTGACCCTTCATCTCCCGCAGCCATTAACGCCCCTGGCGCCGACGGCACCGCCACCCTGA CCCTGACCGGCTCCGAGCCCAAGAACCTGGCCCTGAAGATCGACCTCGTCGACAAGAAGGGCCGCATCGCGGATG AGACGTCCAACTACAGCACCAAGTTCGTCTACGCCCAGGGCTCCGACGCCGCGCCCTCGGCTGCCACGTCGGCCG CGCCCGCCACCACCGGGGCGGGCCAGACGTCGACTGCCGCCACCTCGGCCGCCACCACGGCTGCCCAGTCGCTGG TGTCGACCAGCTCGGCCACCAGCTCGGCCACCAGCTCTGCCAGCGACTCGGATGAGTCGTCGACCGCCTCGTCCT CGGCGGCTCCCCGCTCCTCGTCGCTGAGCACCGCCGCCCGCAACGCCACCGCCACCAGTAGGTTCTTTCCCCTCG GCCCCGTCGTGGGAATCTCCGGCTGACTCGCGTGAACCAGCCTCGTCGGGCTCCCGGCAGACGACGGCGGCCTCG ACGCAGGTCCCGACCAGCGGCGTCGGCCACGTCTCCGCCTCGCTGGCCCTGGTCGGCGCTGCCCTGGCCGCCCTG GCCTACCTCAACTAA |