Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4655
Gene name
LocationContig_2357:154..1452
Strand-
Gene length (bp)1298
Transcript length (bp)1188
Coding sequence length (bp)1188
Protein length (aa) 396

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13391 HNH_2 HNH endonuclease 3.0E-15 179 289

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4655
MAPPSPLHRHQSSLESVIDFSTEPPLGLDQRTQARRTFYHIVNHFEARSHSSENRSRQYNRPSLVRLTYEYARSE
ESQDNFLRAFFRSMALSMDGEEPVNFDQESLAVEFGSALFNFAEYLLDNFFLPLKASAKKTPQPSPACHSAVQRV
QGGAPEFAGTPDRVSVLRGACLVRDRHRCVVSRRFDQAQALRRFESDGDNAQDDDGNLLKEETRPFDALEVAHIL
PHSLTKTNSSSQLDPSKQAALAILNMFDNGVAHLIEGIDIDRPRNAITLTHGLHNFFGDFRIFLEPTLDPQPHTY
RINSFLPAFLVRDPTLPITRTLYLTETCIVDPPSPRLLAIHCAIAHILHLSAAGAYIDKILCDMEEKGVRADGST
EMGRFVKLGLGGWLDDRVHT*
Coding >Hirsu2|4655
ATGGCTCCACCATCTCCTCTCCATCGCCATCAGTCGTCTCTCGAGAGCGTCATCGATTTCTCTACCGAGCCACCT
CTGGGGTTAGATCAACGTACCCAAGCCAGGCGCACATTTTACCACATAGTCAATCACTTCGAAGCAAGAAGCCAC
AGCAGCGAGAACAGAAGTCGTCAATATAACCGCCCTTCGCTCGTCCGCCTTACCTACGAATATGCACGTTCTGAG
GAATCTCAAGATAACTTCTTACGGGCCTTCTTTAGATCCATGGCACTCTCAATGGACGGAGAAGAGCCTGTTAAC
TTTGACCAAGAGAGCCTAGCGGTAGAGTTTGGCTCGGCATTGTTCAACTTCGCAGAATATCTACTGGATAACTTC
TTCCTACCTTTAAAAGCTTCGGCCAAAAAGACACCCCAGCCTTCCCCCGCATGCCATTCTGCAGTCCAACGAGTG
CAAGGAGGTGCACCAGAATTTGCTGGAACGCCAGACCGAGTATCAGTACTTCGGGGTGCATGCCTGGTCCGCGAC
CGTCATCGCTGTGTGGTATCGCGCAGATTCGATCAGGCGCAAGCGCTGAGGCGCTTTGAAAGCGATGGTGACAAT
GCTCAAGATGACGACGGGAATTTACTTAAGGAGGAAACAAGGCCATTCGATGCGCTGGAGGTGGCTCACATCCTC
CCACATTCCCTGACGAAAACTAATTCAAGCTCCCAATTAGATCCTTCCAAACAAGCCGCACTTGCGATCCTCAAT
ATGTTTGATAACGGCGTGGCACATCTTATCGAAGGTATCGATATAGACCGGCCACGAAACGCTATCACTCTTACC
CACGGTCTTCATAATTTCTTTGGCGACTTCCGGATCTTCTTGGAACCTACCTTGGATCCGCAACCGCATACCTAC
CGCATCAACTCGTTTCTTCCAGCATTTTTAGTGCGGGATCCTACTCTCCCCATCACTCGTACACTCTACCTCACG
GAAACGTGCATAGTTGATCCTCCTTCTCCTCGGCTGCTGGCGATCCACTGTGCCATTGCCCATATCCTTCACCTC
TCTGCAGCTGGGGCATACATCGATAAAATTCTCTGCGATATGGAGGAGAAAGGTGTACGTGCCGATGGGTCTACC
GAAATGGGCCGCTTCGTGAAACTCGGACTGGGCGGGTGGTTAGATGACCGTGTTCACACTTAG
Transcript >Hirsu2|4655
ATGGCTCCACCATCTCCTCTCCATCGCCATCAGTCGTCTCTCGAGAGCGTCATCGATTTCTCTACCGAGCCACCT
CTGGGGTTAGATCAACGTACCCAAGCCAGGCGCACATTTTACCACATAGTCAATCACTTCGAAGCAAGAAGCCAC
AGCAGCGAGAACAGAAGTCGTCAATATAACCGCCCTTCGCTCGTCCGCCTTACCTACGAATATGCACGTTCTGAG
GAATCTCAAGATAACTTCTTACGGGCCTTCTTTAGATCCATGGCACTCTCAATGGACGGAGAAGAGCCTGTTAAC
TTTGACCAAGAGAGCCTAGCGGTAGAGTTTGGCTCGGCATTGTTCAACTTCGCAGAATATCTACTGGATAACTTC
TTCCTACCTTTAAAAGCTTCGGCCAAAAAGACACCCCAGCCTTCCCCCGCATGCCATTCTGCAGTCCAACGAGTG
CAAGGAGGTGCACCAGAATTTGCTGGAACGCCAGACCGAGTATCAGTACTTCGGGGTGCATGCCTGGTCCGCGAC
CGTCATCGCTGTGTGGTATCGCGCAGATTCGATCAGGCGCAAGCGCTGAGGCGCTTTGAAAGCGATGGTGACAAT
GCTCAAGATGACGACGGGAATTTACTTAAGGAGGAAACAAGGCCATTCGATGCGCTGGAGGTGGCTCACATCCTC
CCACATTCCCTGACGAAAACTAATTCAAGCTCCCAATTAGATCCTTCCAAACAAGCCGCACTTGCGATCCTCAAT
ATGTTTGATAACGGCGTGGCACATCTTATCGAAGGTATCGATATAGACCGGCCACGAAACGCTATCACTCTTACC
CACGGTCTTCATAATTTCTTTGGCGACTTCCGGATCTTCTTGGAACCTACCTTGGATCCGCAACCGCATACCTAC
CGCATCAACTCGTTTCTTCCAGCATTTTTAGTGCGGGATCCTACTCTCCCCATCACTCGTACACTCTACCTCACG
GAAACGTGCATAGTTGATCCTCCTTCTCCTCGGCTGCTGGCGATCCACTGTGCCATTGCCCATATCCTTCACCTC
TCTGCAGCTGGGGCATACATCGATAAAATTCTCTGCGATATGGAGGAGAAAGGTGTACGTGCCGATGGGTCTACC
GAAATGGGCCGCTTCGTGAAACTCGGACTGGGCGGGTGGTTAGATGACCGTGTTCACACTTAG
Gene >Hirsu2|4655
ATGGCTCCACCATCTCCTCTCCATCGCCATCAGTCGTCTCTCGAGAGCGTCATCGATTTCTCTACCGAGCCACCT
CTGGGGTTAGATCAACGTACCCAAGCCAGGCGCACATTTTACCACATAGTCAATCACTTCGAAGCAAGAAGCCAC
AGCAGCGAGAACAGAAGTCGTCAATATAACCGCCCTTCGCTCGTCCGCCTTACCTACGAATATGCACGTTCTGAG
GAATCTCAAGATAACTTCTTACGGGCCTTCTTTAGATCCATGGCACTCTCAATGGACGGAGAAGAGCCTGTTAAC
TTTGACCAAGAGAGCCTAGCGGTAGAGTTTGGCTCGGCATTGTTCAACTTCGCAGAATATCTACTGGATAACTTC
TTCCTACCTTGTAAGGCTAGTTCATTAGCTCTCTCGATCTCCCGATCTATGCTAAACGTGTCCTAGTAAAAGCTT
CGGCCAAAAAGACACCCCAGCCTTCCCCCGCATGCCATTCTGCAGTCCAACGAGTGCAAGGAGGTGCACCAGAAT
TTGCTGGAACGCCAGACCGAGTATCAGTACTTCGGGGTGCATGCCTGGTCCGCGACCGTCATCGCTGTGTGGTAT
CGCGCAGATTCGATCAGGCGCAAGCGCTGAGGCGCTTTGAAAGCGATGGTGACAATGCTCAAGATGACGACGGGA
ATTTACTTAAGGAGGAAACAAGGCCATTCGATGCGCTGGAGGTGGCTCACATCCTCCCACATTCCCTGACGAAAA
CTAATTCAAGCTCCCAATTAGTATGTCACTTTACCGAAAGAGCTCAGCTCTCTGTTCATAACTAATCTACCTAGG
ATCCTTCCAAACAAGCCGCACTTGCGATCCTCAATATGTTTGATAACGGCGTGGCACATCTTATCGAAGGTATCG
ATATAGACCGGCCACGAAACGCTATCACTCTTACCCACGGTCTTCATAATTTCTTTGGCGACTTCCGGATCTTCT
TGGAACCTACCTTGGATCCGCAACCGCATACCTACCGCATCAACTCGTTTCTTCCAGCATTTTTAGTGCGGGATC
CTACTCTCCCCATCACTCGTACACTCTACCTCACGGAAACGTGCATAGTTGATCCTCCTTCTCCTCGGCTGCTGG
CGATCCACTGTGCCATTGCCCATATCCTTCACCTCTCTGCAGCTGGGGCATACATCGATAAAATTCTCTGCGATA
TGGAGGAGAAAGGTGTACGTGCCGATGGGTCTACCGAAATGGGCCGCTTCGTGAAACTCGGACTGGGCGGGTGGT
TAGATGACCGTGTTCACACTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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