Protein ID | Hirsu2|465 |
Gene name | |
Location | Contig_1093:1470..1943 |
Strand | - |
Gene length (bp) | 473 |
Transcript length (bp) | 285 |
Coding sequence length (bp) | 285 |
Protein length (aa) | 95 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.584 | 0.4751 | 0.4381 | 0.1247 | 0.1543 | 0.1661 | 0.2228 | 0.168 | 0.148 | 0.031 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 10 | 29 | 19 |
Orthofinder run ID | 4 |
Orthogroup | 9681 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps subramaniannii | Hirsu2|465 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|465 MPMPAADCTAIISIAVAVALCAPARLRFSCQPTQIANDKRRPVVPTPPPPLPLALPPSLSSSPFPSSLPVRLLAL PCPQRRRDRFRRSRGMSWS* |
Coding | >Hirsu2|465 ATGCCGATGCCCGCCGCAGACTGTACAGCAATTATCTCCATCGCGGTGGCTGTGGCTCTCTGCGCGCCCGCTCGC CTTCGTTTTTCCTGCCAACCGACGCAAATTGCCAACGACAAACGAAGGCCCGTCGTCCCCACGCCGCCGCCTCCT CTCCCTCTCGCGCTGCCTCCCTCTCTCTCTTCTTCTCCTTTCCCCTCGTCTCTGCCCGTCCGCCTGCTCGCTCTT CCATGTCCGCAGCGCCGCCGCGATCGCTTCCGCCGTAGCCGCGGCATGTCTTGGTCGTAG |
Transcript | >Hirsu2|465 ATGCCGATGCCCGCCGCAGACTGTACAGCAATTATCTCCATCGCGGTGGCTGTGGCTCTCTGCGCGCCCGCTCGC CTTCGTTTTTCCTGCCAACCGACGCAAATTGCCAACGACAAACGAAGGCCCGTCGTCCCCACGCCGCCGCCTCCT CTCCCTCTCGCGCTGCCTCCCTCTCTCTCTTCTTCTCCTTTCCCCTCGTCTCTGCCCGTCCGCCTGCTCGCTCTT CCATGTCCGCAGCGCCGCCGCGATCGCTTCCGCCGTAGCCGCGGCATGTCTTGGTCGTAG |
Gene | >Hirsu2|465 ATGCCGATGCCCGCCGCAGACTGTACAGGTACGCCCTTCACACGCCATAATAGGGGCCCACCCTGCCGGCGCGCA CGTTGATGTGCCGCCCGCTGCCTAGGCCATATCATCGTGAGCGGCCGAGGCCGGCACCCACTGAATGACCCTTTT TTTTCCTCCCTCCTACCCGGCTCCATAACACACAATTCTGCTACGTATTATTATTGATCTTGCTAGCAATTATCT CCATCGCGGTGGCTGTGGCTCTCTGCGCGCCCGCTCGCCTTCGTTTTTCCTGCCAACCGACGCAAATTGCCAACG ACAAACGAAGGCCCGTCGTCCCCACGCCGCCGCCTCCTCTCCCTCTCGCGCTGCCTCCCTCTCTCTCTTCTTCTC CTTTCCCCTCGTCTCTGCCCGTCCGCCTGCTCGCTCTTCCATGTCCGCAGCGCCGCCGCGATCGCTTCCGCCGTA GCCGCGGCATGTCTTGGTCGTAG |