Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4649
Gene name
LocationContig_2350:207..1848
Strand+
Gene length (bp)1641
Transcript length (bp)1443
Coding sequence length (bp)1443
Protein length (aa) 481

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 46 0.45

Transmembrane Domains

Domain # Start End Length
1 348 370 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4649
LVLDTGYIDSLDHLGINSKERILFRHVLRCAPLETAGRSQTVGSRRKSYTRYYYGPMVNYGGYPSVRVNYTLQVN
SLFDQYIHLHEPHEGDAELYFEQAAGFRLRHNECGVRNRTVFLPACSFAPVPQLFRPDADTVITFLSGEGVSFSQ
PSPDPWYLGVVEGPEFTTPDNRSYTLYWPQEAASPMACFKQFQYCNGPGNCGPLASSYDAYRGAAPLFNVSAERL
MQNEETATVRDRYIWFSDLLVDGLESFQDAISTESLQSQPRIHDGTVDPIPNNQWQLDVIQWWDTMLATIQQQFI
SLQGLDFIDPDSEQLRDKETINWHDICANQKILSSDHTSFSLLGLLLTYIIGALIVVMSYALEPIYGFLWRRWGY
KEYTFLQWTADETLQLQRAAHQGIGSGTWTGFVDAIPTTEENEALADLAKIYIPRRDGKIGEADSGNQKGRHDES
TSQSSLLPVRDPDAVQREYAFSGHPDAPER*
Coding >Hirsu2|4649
CTGGTCCTCGACACGGGCTACATCGACAGTCTCGACCATCTCGGCATCAACTCCAAGGAGAGGATCCTGTTCCGC
CACGTCCTCCGCTGCGCGCCGCTCGAGACGGCGGGCCGCTCGCAGACGGTCGGCTCCAGGCGCAAGTCGTACACT
CGGTACTATTACGGGCCCATGGTCAACTACGGCGGATATCCCTCCGTCCGCGTCAACTACACCTTGCAGGTCAAC
AGCCTCTTCGACCAGTACATTCACCTGCACGAACCCCATGAAGGCGATGCCGAGTTGTATTTCGAGCAAGCCGCC
GGCTTTCGACTGAGGCATAACGAGTGTGGGGTGAGGAACCGTACCGTCTTTCTTCCCGCCTGCAGCTTCGCTCCC
GTGCCCCAGCTCTTCCGGCCCGACGCGGATACCGTCATCACCTTTCTGTCTGGCGAGGGCGTCAGCTTTTCCCAG
CCCTCGCCCGACCCGTGGTATCTCGGAGTCGTGGAGGGGCCCGAGTTCACGACGCCAGACAACCGCAGCTACACG
CTGTACTGGCCGCAAGAGGCGGCGTCGCCCATGGCCTGCTTCAAACAGTTCCAGTACTGCAACGGGCCCGGCAAC
TGCGGGCCTCTGGCGAGTTCCTACGACGCCTACCGCGGGGCTGCGCCGCTCTTCAACGTATCCGCCGAGCGGCTG
ATGCAGAATGAGGAGACGGCGACGGTGAGAGACCGCTATATCTGGTTCTCAGACCTCCTTGTCGACGGCCTGGAG
AGCTTCCAAGACGCCATAAGCACCGAGAGCCTGCAGTCGCAGCCTCGCATCCACGACGGCACGGTGGACCCCATA
CCGAACAATCAATGGCAGCTTGACGTGATCCAGTGGTGGGATACCATGCTGGCCACCATCCAGCAGCAGTTCATC
AGTCTACAGGGCCTGGATTTCATAGACCCGGACTCGGAGCAGTTGCGCGACAAGGAAACCATCAATTGGCACGAT
ATATGTGCTAACCAGAAAATCCTATCGTCCGATCACACGTCCTTCAGCCTCCTCGGCCTCCTGCTCACGTACATC
ATCGGTGCTCTGATCGTCGTCATGTCATACGCCTTGGAGCCCATCTACGGCTTTCTCTGGCGCCGATGGGGATAC
AAGGAATACACCTTCCTGCAATGGACGGCGGACGAGACTCTGCAACTCCAGCGAGCCGCCCATCAAGGCATCGGG
TCCGGCACCTGGACCGGCTTCGTCGACGCCATCCCCACGACGGAAGAGAACGAGGCCCTGGCGGATCTGGCCAAG
ATTTACATACCCCGCCGCGATGGTAAGATCGGGGAGGCTGACTCCGGCAACCAGAAGGGACGACACGACGAATCT
ACCAGCCAGAGTTCGCTTCTTCCCGTGCGTGATCCGGATGCTGTGCAGAGGGAGTACGCATTTTCCGGCCACCCG
GACGCCCCTGAACGCTGA
Transcript >Hirsu2|4649
CTGGTCCTCGACACGGGCTACATCGACAGTCTCGACCATCTCGGCATCAACTCCAAGGAGAGGATCCTGTTCCGC
CACGTCCTCCGCTGCGCGCCGCTCGAGACGGCGGGCCGCTCGCAGACGGTCGGCTCCAGGCGCAAGTCGTACACT
CGGTACTATTACGGGCCCATGGTCAACTACGGCGGATATCCCTCCGTCCGCGTCAACTACACCTTGCAGGTCAAC
AGCCTCTTCGACCAGTACATTCACCTGCACGAACCCCATGAAGGCGATGCCGAGTTGTATTTCGAGCAAGCCGCC
GGCTTTCGACTGAGGCATAACGAGTGTGGGGTGAGGAACCGTACCGTCTTTCTTCCCGCCTGCAGCTTCGCTCCC
GTGCCCCAGCTCTTCCGGCCCGACGCGGATACCGTCATCACCTTTCTGTCTGGCGAGGGCGTCAGCTTTTCCCAG
CCCTCGCCCGACCCGTGGTATCTCGGAGTCGTGGAGGGGCCCGAGTTCACGACGCCAGACAACCGCAGCTACACG
CTGTACTGGCCGCAAGAGGCGGCGTCGCCCATGGCCTGCTTCAAACAGTTCCAGTACTGCAACGGGCCCGGCAAC
TGCGGGCCTCTGGCGAGTTCCTACGACGCCTACCGCGGGGCTGCGCCGCTCTTCAACGTATCCGCCGAGCGGCTG
ATGCAGAATGAGGAGACGGCGACGGTGAGAGACCGCTATATCTGGTTCTCAGACCTCCTTGTCGACGGCCTGGAG
AGCTTCCAAGACGCCATAAGCACCGAGAGCCTGCAGTCGCAGCCTCGCATCCACGACGGCACGGTGGACCCCATA
CCGAACAATCAATGGCAGCTTGACGTGATCCAGTGGTGGGATACCATGCTGGCCACCATCCAGCAGCAGTTCATC
AGTCTACAGGGCCTGGATTTCATAGACCCGGACTCGGAGCAGTTGCGCGACAAGGAAACCATCAATTGGCACGAT
ATATGTGCTAACCAGAAAATCCTATCGTCCGATCACACGTCCTTCAGCCTCCTCGGCCTCCTGCTCACGTACATC
ATCGGTGCTCTGATCGTCGTCATGTCATACGCCTTGGAGCCCATCTACGGCTTTCTCTGGCGCCGATGGGGATAC
AAGGAATACACCTTCCTGCAATGGACGGCGGACGAGACTCTGCAACTCCAGCGAGCCGCCCATCAAGGCATCGGG
TCCGGCACCTGGACCGGCTTCGTCGACGCCATCCCCACGACGGAAGAGAACGAGGCCCTGGCGGATCTGGCCAAG
ATTTACATACCCCGCCGCGATGGTAAGATCGGGGAGGCTGACTCCGGCAACCAGAAGGGACGACACGACGAATCT
ACCAGCCAGAGTTCGCTTCTTCCCGTGCGTGATCCGGATGCTGTGCAGAGGGAGTACGCATTTTCCGGCCACCCG
GACGCCCCTGAACGCTGA
Gene >Hirsu2|4649
CTGGTCCTCGACACGGGCTACATCGACAGTCTCGACCATCTCGGCATCAACTCCAAGGAGAGGATCCTGTTCCGC
CACGTCCTCCGCTGCGCGCCGCTCGAGACGGCGGGCCGCTCGCAGACGGTCGGCTCCAGGCGCAAGTCGTACACT
CGGTACTATTACGGGCCCATGGTCAACTACGGCGGATATCCCTCCGTCCGCGTCAACTACACCTTGCAGGTCAAC
AGCCTCTTCGACCAGTACATTCACCTGCACGAACCCCATGAAGGCGATGCCGAGTTGTATTTCGAGCAAGCCGCC
GGCTTTCGACTGAGGTACGCCCACCTCCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTT
CTTCTGCTGCTTCTTCTTCTTCCCCCGCCTTCATCAGGCTGCCGCCGCTGACCCGTCCTCACAGGCATAACGAGT
GTGGGGTGAGGAACCGTACCGTCTTTCTTCCCGCCTGCAGCTTCGCTCCCGTGCCCCAGCTCTTCCGGCCCGACG
CGGATACCGTCATCACCTTTCTGTCTGGCGAGGGCGTCAGCTTTTCCCAGCCCTCGCCCGACCCGTGGTATCTCG
GAGTCGTGGAGGGGCCCGAGTTCACGACGCCAGACAACCGCAGCTACACGCTGTACTGGCCGCAAGAGGCGGCGT
CGCCCATGGCCTGCTTCAAACAGTTCCAGTACTGCAACGGGCCCGGCAACTGCGGGCCTCTGGCGAGTTCCTACG
ACGCCTACCGCGGGGCTGCGCCGCTCTTCAACGTATCCGCCGAGCGGCTGATGCAGAATGAGGAGACGGCGACGG
TGAGAGACCGCTATATCTGGTTCTCAGACCTCCTTGTCGACGGCCTGGAGAGCTTCCAAGACGCCATAAGCACCG
AGAGCCTGCAGTCGCAGCCTCGCATCCACGACGGCACGGTGGACCCCATACCGAACAATCAATGGCAGCTTGACG
TGATCCAGTGGTGGGATACCATGCTGGCCACCATCCAGCAGCAGTTCATCAGTCTACAGGGCCTGGATTTCATAG
ACCCGGACTCGGAGCAGTTGCGCGACAAGGAAACCATCAATTGGCACGATATATGTGCTAACCAGGTACGCTGCC
TCCCCCTAACCCTCCCCTTGACCGGTCTCGCGCAACAGTCTTACTGAACCGCTTGCACCTCAGAAAATCCTATCG
TCCGATCACACGTCCTTCAGCCTCCTCGGCCTCCTGCTCACGTACATCATCGGTGCTCTGATCGTCGTCATGTCA
TACGCCTTGGAGCCCATCTACGGCTTTCTCTGGCGCCGATGGGGATACAAGGAATACACCTTCCTGCAATGGACG
GCGGACGAGACTCTGCAACTCCAGCGAGCCGCCCATCAAGGCATCGGGTCCGGCACCTGGACCGGCTTCGTCGAC
GCCATCCCCACGACGGAAGAGAACGAGGCCCTGGCGGATCTGGCCAAGATTTACATACCCCGCCGCGATGGTAAG
ATCGGGGAGGCTGACTCCGGCAACCAGAAGGGACGACACGACGAATCTACCAGCCAGAGTTCGCTTCTTCCCGTG
CGTGATCCGGATGCTGTGCAGAGGGAGTACGCATTTTCCGGCCACCCGGACGCCCCTGAACGCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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