© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|4621 |
| Gene name | |
| Location | Contig_234:14979..16802 |
| Strand | - |
| Gene length (bp) | 1823 |
| Transcript length (bp) | 1608 |
| Coding sequence length (bp) | 1608 |
| Protein length (aa) | 536 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.4E-25 | 28 | 325 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 6.6E-10 | 53 | 175 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 1 | 529 | 6.0E-62 |
| sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 16 | 477 | 2.0E-44 |
| sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 15 | 477 | 2.0E-40 |
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 15 | 483 | 5.0E-39 |
| sp|A8GCZ5|MDTG_SERP5 | Multidrug resistance protein MdtG OS=Serratia proteamaculans (strain 568) GN=mdtG PE=3 SV=1 | 33 | 227 | 1.0E-11 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 1 | 529 | 6.0E-62 |
| sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 16 | 477 | 2.0E-44 |
| sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 15 | 477 | 2.0E-40 |
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 15 | 483 | 5.0E-39 |
| sp|A8GCZ5|MDTG_SERP5 | Multidrug resistance protein MdtG OS=Serratia proteamaculans (strain 568) GN=mdtG PE=3 SV=1 | 33 | 227 | 1.0E-11 |
| sp|B4EYY4|MDTG_PROMH | Multidrug resistance protein MdtG OS=Proteus mirabilis (strain HI4320) GN=mdtG PE=3 SV=1 | 37 | 181 | 2.0E-11 |
| sp|D8MQN9|MDTG_ERWBE | Multidrug resistance protein MdtG OS=Erwinia billingiae (strain Eb661) GN=mdtG PE=3 SV=1 | 32 | 181 | 4.0E-10 |
| sp|P02980|TCR2_ECOLX | Tetracycline resistance protein, class B OS=Escherichia coli GN=tetA PE=1 SV=1 | 25 | 175 | 2.0E-09 |
| sp|P0A4K5|PMRA_STRR6 | Multi-drug resistance efflux pump PmrA OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=pmrA PE=3 SV=1 | 33 | 172 | 3.0E-08 |
| sp|P0A4K4|PMRA_STRPN | Multi-drug resistance efflux pump PmrA OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) GN=pmrA PE=3 SV=1 | 33 | 172 | 3.0E-08 |
| sp|Q07282|TCR5_ECOLX | Tetracycline resistance protein, class E OS=Escherichia coli GN=tetA PE=3 SV=1 | 25 | 241 | 9.0E-08 |
| sp|P51564|TCR8_PASMD | Tetracycline resistance protein, class H OS=Pasteurella multocida GN=tetA PE=3 SV=1 | 52 | 181 | 2.0E-07 |
| sp|Q9HE13|YI32_SCHPO | Uncharacterized MFS-type transporter C1399.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1399.02 PE=3 SV=1 | 65 | 186 | 3.0E-07 |
| sp|E8XY75|MDTG_RAHSY | Multidrug resistance protein MdtG OS=Rahnella sp. (strain Y9602) GN=mdtG PE=3 SV=1 | 33 | 112 | 3.0E-07 |
| sp|Q10072|YAN6_SCHPO | Uncharacterized transporter C3H1.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.06c PE=3 SV=1 | 65 | 186 | 4.0E-07 |
| sp|P02981|TCR3_ECOLX | Tetracycline resistance protein, class C OS=Escherichia coli GN=tetA PE=1 SV=1 | 50 | 168 | 4.0E-07 |
| sp|P02982|TCR1_ECOLX | Tetracycline resistance protein, class A OS=Escherichia coli GN=tetA PE=3 SV=2 | 52 | 168 | 5.0E-07 |
| sp|P33733|TCR4_SALOR | Tetracycline resistance protein, class D OS=Salmonella ordonez GN=tetA PE=3 SV=1 | 25 | 174 | 6.0E-07 |
| sp|A1JN04|MDTG_YERE8 | Multidrug resistance protein MdtG OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) GN=mdtG PE=3 SV=1 | 33 | 181 | 7.0E-07 |
| sp|D2BX50|MDTG_DICD5 | Multidrug resistance protein MdtG OS=Dickeya dadantii (strain Ech586) GN=mdtG PE=3 SV=1 | 33 | 126 | 2.0E-06 |
| sp|Q6GIU7|NORA_STAAR | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MRSA252) GN=norA PE=3 SV=1 | 61 | 181 | 2.0E-06 |
| sp|E3GC98|MDTG_ENTLS | Multidrug resistance protein MdtG OS=Enterobacter lignolyticus (strain SCF1) GN=mdtG PE=3 SV=1 | 33 | 181 | 2.0E-06 |
| sp|Q5HHX4|NORA_STAAC | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain COL) GN=norA PE=3 SV=1 | 61 | 181 | 3.0E-06 |
| sp|Q6GBD5|NORA_STAAS | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MSSA476) GN=norA PE=3 SV=1 | 61 | 181 | 3.0E-06 |
| sp|P0A0J6|NORA_STAAW | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MW2) GN=norA PE=3 SV=1 | 61 | 181 | 3.0E-06 |
| sp|P0A0J7|NORA_STAAU | Quinolone resistance protein NorA OS=Staphylococcus aureus GN=norA PE=3 SV=1 | 61 | 181 | 3.0E-06 |
| sp|P0A0J5|NORA_STAAN | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain N315) GN=norA PE=3 SV=1 | 61 | 181 | 3.0E-06 |
| sp|P0A0J4|NORA_STAAM | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=norA PE=3 SV=1 | 61 | 181 | 3.0E-06 |
| sp|Q14728|MFS10_HUMAN | Major facilitator superfamily domain-containing protein 10 OS=Homo sapiens GN=MFSD10 PE=1 SV=1 | 50 | 177 | 4.0E-06 |
| sp|P51563|TCR7_VIBAN | Tetracycline resistance protein, class G OS=Vibrio anguillarum GN=tetA PE=3 SV=1 | 53 | 194 | 4.0E-06 |
| sp|Q8Z7L7|MDTG_SALTI | Multidrug resistance protein MdtG OS=Salmonella typhi GN=mdtG PE=3 SV=1 | 33 | 112 | 6.0E-06 |
| sp|Q0P5M9|MFS10_BOVIN | Major facilitator superfamily domain-containing protein 10 OS=Bos taurus GN=MFSD10 PE=2 SV=1 | 52 | 177 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 32 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 23 | 45 | 22 |
| 2 | 58 | 80 | 22 |
| 3 | 90 | 112 | 22 |
| 4 | 148 | 170 | 22 |
| 5 | 192 | 214 | 22 |
| 6 | 293 | 310 | 17 |
| 7 | 353 | 375 | 22 |
| 8 | 382 | 404 | 22 |
| 9 | 414 | 436 | 22 |
| 10 | 449 | 471 | 22 |
| 11 | 481 | 503 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4621 MSLTKQARPRNPDDFPTLQLFLLAIVRLAEPIALTSIFPYAWALVKKFKIGNEQDASFYAGLLISSFSLAEALMG MFWGGLSDRIGRKPVLMVGCMGTMFSMVMVGFASNIWIALLGRALGGLLNGNIGVIQTMVGELVTKPEHEPRAFS VMPFVWSIGTIIGPCIGGTFADPHASWPGAFPRGGLFDRFPYLLPNLLCAALLLVSIVLGFLLLDETHPDMQPRV LLPPNTYVSEETPLIETSDAIKRPAVDLRAETYGTMRISGGELAQNELAGVLVEKARSVTTAIWNKRVVGFIVAL SIFTYHSMTYDHLMPIFFEDERASTAATLFGAGAGSPTPLGLAGGLGLSLRDVGMIMAVNGAIALFVQAVIFPLA AERVGVYRLFLIVTVLHPVVYAIVPLLLLVPQSLVFPAIYACLAIRNILSITLYPLLLILIKEATPSSSALGKVN GLAASAGAACRMVAPPVAGFLYTYGSKMNCTALAWYGSAFVAVIGSVQCFSVPREQGHDGSEESAVARDTAESTP LLTHAPDGGH* |
| Coding | >Hirsu2|4621 ATGTCCCTAACGAAGCAGGCCCGCCCTCGCAACCCCGACGACTTCCCGACTCTTCAACTCTTTCTTCTCGCCATC GTTCGCCTTGCCGAACCCATAGCCCTCACCTCCATCTTCCCCTATGCCTGGGCCCTGGTCAAGAAATTCAAAATC GGCAACGAGCAAGATGCCTCCTTCTACGCCGGCCTCCTCATCTCCTCCTTCTCTCTCGCCGAGGCTCTCATGGGC ATGTTCTGGGGCGGCCTGTCGGATCGCATCGGCCGCAAGCCCGTCCTGATGGTCGGATGCATGGGCACCATGTTC AGCATGGTCATGGTAGGATTCGCCTCCAACATCTGGATCGCGTTACTCGGAAGAGCCTTAGGTGGTCTTCTCAAC GGCAACATCGGCGTCATTCAGACCATGGTCGGCGAGCTCGTCACCAAGCCCGAGCATGAACCCCGCGCATTTTCC GTCATGCCCTTCGTCTGGAGCATCGGGACCATCATCGGACCGTGCATCGGCGGCACCTTCGCCGACCCCCATGCG TCCTGGCCCGGGGCTTTCCCTCGAGGTGGCCTGTTCGACCGCTTCCCCTACCTTCTCCCCAACCTGCTCTGCGCC GCTCTCCTGCTCGTCAGCATCGTCCTGGGCTTCCTGCTCCTCGACGAGACGCACCCTGACATGCAACCCCGAGTG CTGCTGCCGCCAAACACCTACGTCTCCGAGGAGACTCCGCTGATCGAAACCTCAGACGCCATCAAGCGCCCGGCC GTCGACCTGCGAGCTGAGACTTATGGCACGATGCGGATCAGCGGCGGCGAGCTCGCTCAAAACGAGCTGGCCGGG GTCTTGGTCGAGAAGGCCAGGTCGGTCACGACGGCCATCTGGAACAAGCGCGTCGTCGGCTTCATCGTCGCCCTG TCCATCTTCACCTACCACTCCATGACCTACGACCACCTCATGCCCATCTTCTTCGAGGACGAACGCGCGTCGACG GCCGCCACCCTCTTCGGCGCCGGCGCCGGCTCTCCCACCCCCCTCGGCCTTGCCGGCGGCTTGGGGCTCTCGCTG CGCGACGTGGGCATGATCATGGCCGTCAACGGTGCCATCGCGCTGTTCGTCCAAGCCGTCATCTTCCCACTGGCG GCAGAGAGAGTCGGTGTGTACAGACTCTTCCTCATTGTCACAGTTCTGCACCCCGTTGTTTACGCCATCGTCCCC CTGCTGCTCCTCGTCCCCCAATCGCTCGTCTTCCCCGCCATTTATGCCTGCCTCGCCATCCGCAACATACTCTCC ATCACGCTCTACCCGCTCCTCCTCATCCTCATCAAGGAGGCCACCCCTTCCTCCAGCGCACTGGGCAAGGTCAAT GGACTGGCCGCCAGCGCCGGAGCCGCCTGTCGCATGGTGGCGCCCCCCGTCGCGGGCTTCCTCTACACGTATGGC AGCAAGATGAACTGCACGGCGCTGGCCTGGTACGGCAGCGCCTTCGTCGCCGTCATCGGGTCGGTTCAGTGCTTC TCTGTGCCCCGCGAACAAGGCCACGACGGATCGGAGGAGAGTGCCGTGGCACGAGACACTGCAGAGTCGACCCCC CTCCTCACGCACGCCCCTGACGGCGGACATTGA |
| Transcript | >Hirsu2|4621 ATGTCCCTAACGAAGCAGGCCCGCCCTCGCAACCCCGACGACTTCCCGACTCTTCAACTCTTTCTTCTCGCCATC GTTCGCCTTGCCGAACCCATAGCCCTCACCTCCATCTTCCCCTATGCCTGGGCCCTGGTCAAGAAATTCAAAATC GGCAACGAGCAAGATGCCTCCTTCTACGCCGGCCTCCTCATCTCCTCCTTCTCTCTCGCCGAGGCTCTCATGGGC ATGTTCTGGGGCGGCCTGTCGGATCGCATCGGCCGCAAGCCCGTCCTGATGGTCGGATGCATGGGCACCATGTTC AGCATGGTCATGGTAGGATTCGCCTCCAACATCTGGATCGCGTTACTCGGAAGAGCCTTAGGTGGTCTTCTCAAC GGCAACATCGGCGTCATTCAGACCATGGTCGGCGAGCTCGTCACCAAGCCCGAGCATGAACCCCGCGCATTTTCC GTCATGCCCTTCGTCTGGAGCATCGGGACCATCATCGGACCGTGCATCGGCGGCACCTTCGCCGACCCCCATGCG TCCTGGCCCGGGGCTTTCCCTCGAGGTGGCCTGTTCGACCGCTTCCCCTACCTTCTCCCCAACCTGCTCTGCGCC GCTCTCCTGCTCGTCAGCATCGTCCTGGGCTTCCTGCTCCTCGACGAGACGCACCCTGACATGCAACCCCGAGTG CTGCTGCCGCCAAACACCTACGTCTCCGAGGAGACTCCGCTGATCGAAACCTCAGACGCCATCAAGCGCCCGGCC GTCGACCTGCGAGCTGAGACTTATGGCACGATGCGGATCAGCGGCGGCGAGCTCGCTCAAAACGAGCTGGCCGGG GTCTTGGTCGAGAAGGCCAGGTCGGTCACGACGGCCATCTGGAACAAGCGCGTCGTCGGCTTCATCGTCGCCCTG TCCATCTTCACCTACCACTCCATGACCTACGACCACCTCATGCCCATCTTCTTCGAGGACGAACGCGCGTCGACG GCCGCCACCCTCTTCGGCGCCGGCGCCGGCTCTCCCACCCCCCTCGGCCTTGCCGGCGGCTTGGGGCTCTCGCTG CGCGACGTGGGCATGATCATGGCCGTCAACGGTGCCATCGCGCTGTTCGTCCAAGCCGTCATCTTCCCACTGGCG GCAGAGAGAGTCGGTGTGTACAGACTCTTCCTCATTGTCACAGTTCTGCACCCCGTTGTTTACGCCATCGTCCCC CTGCTGCTCCTCGTCCCCCAATCGCTCGTCTTCCCCGCCATTTATGCCTGCCTCGCCATCCGCAACATACTCTCC ATCACGCTCTACCCGCTCCTCCTCATCCTCATCAAGGAGGCCACCCCTTCCTCCAGCGCACTGGGCAAGGTCAAT GGACTGGCCGCCAGCGCCGGAGCCGCCTGTCGCATGGTGGCGCCCCCCGTCGCGGGCTTCCTCTACACGTATGGC AGCAAGATGAACTGCACGGCGCTGGCCTGGTACGGCAGCGCCTTCGTCGCCGTCATCGGGTCGGTTCAGTGCTTC TCTGTGCCCCGCGAACAAGGCCACGACGGATCGGAGGAGAGTGCCGTGGCACGAGACACTGCAGAGTCGACCCCC CTCCTCACGCACGCCCCTGACGGCGGACATTGA |
| Gene | >Hirsu2|4621 ATGTCCCTAACGAAGCAGGCCCGCCCTCGCAACCCCGACGACTTCCCGACTCTTCAACTCTTTCTTCTCGGTAAG CAGTTGGCCCATCTCGTCCCTCGCCTCGTCTCTCTGCCGTCGTCTCTCTGCCGCCGTCTAGAGCTCTGCCGCCGT CTCCCCACCGGTGCCGCGGCTGACACTTCCCTCTCGCCCACAGCCATCGTTCGCCTTGCCGAACCCATAGCCCTC ACCTCCATCTTCCCCTATGCCTGGGCCCTGGTCAAGAAATTCAAAATCGGCAACGAGCAAGATGCCTCCTTCTAC GCCGGCCTCCTCATCTCCTCCTTCTCTCTCGCCGAGGCTCTCATGGGCATGTTCTGGGGCGGCCTGTCGGATCGC ATCGGCCGCAAGCCCGTCCTGATGGTCGGATGCATGGGCACCATGTTCAGCATGGTCATGGTAGGATTCGCCTCC AACATCTGGATCGCGTTACTCGGAAGAGCCTTAGGTGGTCTTCTCAACGGCAACATCGGCGTCATTCAGACCATG GTCGGCGAGCTCGTCACCAAGCCCGAGCATGAACGTGAGTCCGACTCCTTCCTCCTCTCCTCTCTGCCATGAGCT TCGCTCTCCTCTCCACCTGAGCTTGAGCCGCGCTGACCTGCCGCCCCGCAGCCCGCGCATTTTCCGTCATGCCCT TCGTCTGGAGCATCGGGACCATCATCGGACCGTGCATCGGCGGCACCTTCGCCGACCCCCATGCGTCCTGGCCCG GGGCTTTCCCTCGAGGTGGCCTGTTCGACCGCTTCCCCTACCTTCTCCCCAACCTGCTCTGCGCCGCTCTCCTGC TCGTCAGCATCGTCCTGGGCTTCCTGCTCCTCGACGAGACGCACCCTGACATGCAACCCCGAGTGCTGCTGCCGC CAAACACCTACGTCTCCGAGGAGACTCCGCTGATCGAAACCTCAGACGCCATCAAGCGCCCGGCCGTCGACCTGC GAGCTGAGACTTATGGCACGATGCGGATCAGCGGCGGCGAGCTCGCTCAAAACGAGCTGGCCGGGGTCTTGGTCG AGAAGGCCAGGTCGGTCACGACGGCCATCTGGAACAAGCGCGTCGTCGGCTTCATCGTCGCCCTGTCCATCTTCA CCTACCACTCCATGACCTACGACCACCTCATGCCCATCTTCTTCGAGGACGAACGCGCGTCGACGGCCGCCACCC TCTTCGGCGCCGGCGCCGGCTCTCCCACCCCCCTCGGCCTTGCCGGCGGCTTGGGGCTCTCGCTGCGCGACGTGG GCATGATCATGGCCGTCAACGGTGCCATCGCGCTGTTCGTCCAAGCCGTCATCTTCCCACTGGCGGCAGAGAGAG TCGGTGTGTACAGACTCTTCCTCATTGTCACAGTTCTGCACCCCGTTGTTTACGCCATCGTCCCCCTGCTGCTCC TCGTCCCCCAATCGCTCGTCTTCCCCGCCATTTATGCCTGCCTCGCCATCCGCAACATACTCTCCATCACGCTCT ACCCGCTCCTCCTCATCCTCATCAAGGAGGCCACCCCTTCCTCCAGCGCACTGGGCAAGGTCAATGGACTGGCCG CCAGCGCCGGAGCCGCCTGTCGCATGGTGGCGCCCCCCGTCGCGGGCTTCCTCTACACGTATGGCAGCAAGATGA ACTGCACGGCGCTGGCCTGGTACGGCAGCGCCTTCGTCGCCGTCATCGGGTCGGTTCAGTGCTTCTCTGTGCCCC GCGAACAAGGCCACGACGGATCGGAGGAGAGTGCCGTGGCACGAGACACTGCAGAGTCGACCCCCCTCCTCACGC ACGCCCCTGACGGCGGACATTGA |