Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4619
Gene name
LocationContig_234:11786..12806
Strand-
Gene length (bp)1020
Transcript length (bp)1020
Coding sequence length (bp)1020
Protein length (aa) 340

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1259 0.0461 0.9379 0.0986 0.0735 0.0515 0.1476 0.1316 0.1371 0.0017

SignalP

SignalP signal predicted Location Score
Yes 1 - 20 0.999705

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1671
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|06301
Ophiocordyceps camponoti-rufipedis Ophun1|309
Ophiocordyceps kimflemingae Ophio5|7317
Ophiocordyceps subramaniannii Hirsu2|1422
Ophiocordyceps subramaniannii Hirsu2|4619 (this protein)
Ophiocordyceps subramaniannii Hirsu2|5260

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4619
MISSSRAIAAALAVLASAHAQNGCFTRFPELGSGYFEDAQDSCCGPEFAVVKNKVALCQETAVSPAPFKDFEQCR
FRPWTTPCEKGIRIAAESFPQPGRCGARKAGPVSGSPPDDSVGCYSGRLFVNAGKCCSSDFVMADGSGVRCGDEP
RFVPDAAFPADNVRPGHLPPNVPACNGTITSSWCPAGVRATGLFVLHRDVCSDTTSENRCCERHDEVRDENGVCQ
YDSLGSPYERFKAYRKFAAARARDGCPPPKRGDRCCPDVTQFRNANNKCSTKTSRGKIITPETLLGFRVEDNCHD
LTHAADDPLFQQAVEAVDSTTTEKDEAWKKMIQGLGSEY*
Coding >Hirsu2|4619
ATGATTTCCTCAAGCCGAGCCATTGCAGCGGCGCTAGCCGTACTGGCTTCCGCTCATGCCCAGAACGGCTGCTTT
ACTCGCTTCCCAGAGCTCGGTTCCGGCTACTTCGAGGACGCTCAGGACTCATGCTGCGGCCCCGAGTTTGCTGTC
GTCAAGAACAAGGTAGCTCTCTGCCAGGAGACGGCCGTCAGTCCCGCCCCCTTCAAGGATTTCGAGCAGTGCCGC
TTCCGTCCGTGGACGACGCCTTGCGAAAAGGGCATCCGGATCGCCGCCGAATCCTTCCCCCAGCCGGGCCGGTGC
GGGGCCCGGAAAGCGGGGCCGGTCTCGGGCAGCCCGCCCGACGACAGCGTCGGCTGCTACAGCGGCCGGCTCTTC
GTCAACGCCGGCAAGTGCTGCAGCTCCGACTTCGTCATGGCCGACGGCAGCGGGGTCCGGTGCGGCGACGAGCCG
AGATTCGTTCCCGACGCCGCCTTCCCCGCCGACAACGTCCGGCCCGGGCATCTCCCCCCGAACGTGCCGGCCTGC
AACGGGACCATCACGTCCAGCTGGTGCCCCGCGGGGGTGCGTGCCACGGGGCTCTTCGTCCTGCACCGGGACGTG
TGCAGCGACACGACCAGCGAGAACAGATGTTGCGAGCGGCACGACGAGGTGCGGGACGAAAACGGCGTCTGCCAG
TACGATAGCCTGGGATCCCCGTATGAAAGGTTCAAGGCCTACCGGAAGTTTGCCGCCGCCAGGGCCAGGGACGGC
TGCCCCCCGCCCAAGAGAGGCGACAGATGCTGTCCGGACGTCACGCAGTTCCGGAACGCGAACAACAAGTGCAGC
ACCAAGACTTCGCGGGGAAAGATAATTACCCCGGAAACGTTGCTCGGCTTTCGCGTGGAGGATAACTGCCACGAC
CTTACACACGCTGCCGACGATCCTTTGTTCCAGCAGGCGGTGGAGGCGGTTGACTCAACGACGACAGAGAAAGAC
GAGGCGTGGAAGAAGATGATCCAAGGGTTGGGAAGTGAATACTAG
Transcript >Hirsu2|4619
ATGATTTCCTCAAGCCGAGCCATTGCAGCGGCGCTAGCCGTACTGGCTTCCGCTCATGCCCAGAACGGCTGCTTT
ACTCGCTTCCCAGAGCTCGGTTCCGGCTACTTCGAGGACGCTCAGGACTCATGCTGCGGCCCCGAGTTTGCTGTC
GTCAAGAACAAGGTAGCTCTCTGCCAGGAGACGGCCGTCAGTCCCGCCCCCTTCAAGGATTTCGAGCAGTGCCGC
TTCCGTCCGTGGACGACGCCTTGCGAAAAGGGCATCCGGATCGCCGCCGAATCCTTCCCCCAGCCGGGCCGGTGC
GGGGCCCGGAAAGCGGGGCCGGTCTCGGGCAGCCCGCCCGACGACAGCGTCGGCTGCTACAGCGGCCGGCTCTTC
GTCAACGCCGGCAAGTGCTGCAGCTCCGACTTCGTCATGGCCGACGGCAGCGGGGTCCGGTGCGGCGACGAGCCG
AGATTCGTTCCCGACGCCGCCTTCCCCGCCGACAACGTCCGGCCCGGGCATCTCCCCCCGAACGTGCCGGCCTGC
AACGGGACCATCACGTCCAGCTGGTGCCCCGCGGGGGTGCGTGCCACGGGGCTCTTCGTCCTGCACCGGGACGTG
TGCAGCGACACGACCAGCGAGAACAGATGTTGCGAGCGGCACGACGAGGTGCGGGACGAAAACGGCGTCTGCCAG
TACGATAGCCTGGGATCCCCGTATGAAAGGTTCAAGGCCTACCGGAAGTTTGCCGCCGCCAGGGCCAGGGACGGC
TGCCCCCCGCCCAAGAGAGGCGACAGATGCTGTCCGGACGTCACGCAGTTCCGGAACGCGAACAACAAGTGCAGC
ACCAAGACTTCGCGGGGAAAGATAATTACCCCGGAAACGTTGCTCGGCTTTCGCGTGGAGGATAACTGCCACGAC
CTTACACACGCTGCCGACGATCCTTTGTTCCAGCAGGCGGTGGAGGCGGTTGACTCAACGACGACAGAGAAAGAC
GAGGCGTGGAAGAAGATGATCCAAGGGTTGGGAAGTGAATACTAG
Gene >Hirsu2|4619
ATGATTTCCTCAAGCCGAGCCATTGCAGCGGCGCTAGCCGTACTGGCTTCCGCTCATGCCCAGAACGGCTGCTTT
ACTCGCTTCCCAGAGCTCGGTTCCGGCTACTTCGAGGACGCTCAGGACTCATGCTGCGGCCCCGAGTTTGCTGTC
GTCAAGAACAAGGTAGCTCTCTGCCAGGAGACGGCCGTCAGTCCCGCCCCCTTCAAGGATTTCGAGCAGTGCCGC
TTCCGTCCGTGGACGACGCCTTGCGAAAAGGGCATCCGGATCGCCGCCGAATCCTTCCCCCAGCCGGGCCGGTGC
GGGGCCCGGAAAGCGGGGCCGGTCTCGGGCAGCCCGCCCGACGACAGCGTCGGCTGCTACAGCGGCCGGCTCTTC
GTCAACGCCGGCAAGTGCTGCAGCTCCGACTTCGTCATGGCCGACGGCAGCGGGGTCCGGTGCGGCGACGAGCCG
AGATTCGTTCCCGACGCCGCCTTCCCCGCCGACAACGTCCGGCCCGGGCATCTCCCCCCGAACGTGCCGGCCTGC
AACGGGACCATCACGTCCAGCTGGTGCCCCGCGGGGGTGCGTGCCACGGGGCTCTTCGTCCTGCACCGGGACGTG
TGCAGCGACACGACCAGCGAGAACAGATGTTGCGAGCGGCACGACGAGGTGCGGGACGAAAACGGCGTCTGCCAG
TACGATAGCCTGGGATCCCCGTATGAAAGGTTCAAGGCCTACCGGAAGTTTGCCGCCGCCAGGGCCAGGGACGGC
TGCCCCCCGCCCAAGAGAGGCGACAGATGCTGTCCGGACGTCACGCAGTTCCGGAACGCGAACAACAAGTGCAGC
ACCAAGACTTCGCGGGGAAAGATAATTACCCCGGAAACGTTGCTCGGCTTTCGCGTGGAGGATAACTGCCACGAC
CTTACACACGCTGCCGACGATCCTTTGTTCCAGCAGGCGGTGGAGGCGGTTGACTCAACGACGACAGAGAAAGAC
GAGGCGTGGAAGAAGATGATCCAAGGGTTGGGAAGTGAATACTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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