Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4613
Gene name
LocationContig_2338:1716..2759
Strand+
Gene length (bp)1043
Transcript length (bp)840
Coding sequence length (bp)840
Protein length (aa) 280

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01532 Glyco_hydro_47 Glycosyl hydrolase family 47 1.7E-30 35 262

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O94726|MNL1_SCHPO ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mnl1 PE=3 SV=2 3 262 1.0E-35
sp|Q925U4|EDEM1_MOUSE ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Mus musculus GN=Edem1 PE=1 SV=1 26 262 3.0E-30
sp|Q92611|EDEM1_HUMAN ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Homo sapiens GN=EDEM1 PE=1 SV=1 26 262 4.0E-30
sp|Q6GQB9|EDEM3_XENLA ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Xenopus laevis GN=edem3 PE=2 SV=2 1 262 3.0E-29
sp|P38888|MNL1_YEAST ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNL1 PE=1 SV=1 17 218 2.0E-28
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Swissprot ID Swissprot Description Start End E-value
sp|O94726|MNL1_SCHPO ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mnl1 PE=3 SV=2 3 262 1.0E-35
sp|Q925U4|EDEM1_MOUSE ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Mus musculus GN=Edem1 PE=1 SV=1 26 262 3.0E-30
sp|Q92611|EDEM1_HUMAN ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Homo sapiens GN=EDEM1 PE=1 SV=1 26 262 4.0E-30
sp|Q6GQB9|EDEM3_XENLA ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Xenopus laevis GN=edem3 PE=2 SV=2 1 262 3.0E-29
sp|P38888|MNL1_YEAST ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNL1 PE=1 SV=1 17 218 2.0E-28
sp|Q9SXC9|MNS5_ARATH Probable alpha-mannosidase I MNS5 OS=Arabidopsis thaliana GN=MNS5 PE=2 SV=1 24 262 1.0E-25
sp|Q9BZQ6|EDEM3_HUMAN ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Homo sapiens GN=EDEM3 PE=1 SV=2 6 262 7.0E-25
sp|Q2HXL6|EDEM3_MOUSE ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Mus musculus GN=Edem3 PE=1 SV=2 6 262 1.0E-24
sp|Q9FG93|MNS4_ARATH Probable alpha-mannosidase I MNS4 OS=Arabidopsis thaliana GN=MNS4 PE=2 SV=1 17 262 2.0E-21
sp|Q9BV94|EDEM2_HUMAN ER degradation-enhancing alpha-mannosidase-like protein 2 OS=Homo sapiens GN=EDEM2 PE=1 SV=2 10 221 2.0E-20
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GO

GO Term Description Terminal node
GO:0005509 calcium ion binding Yes
GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity Yes
GO:0016020 membrane Yes
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds No
GO:0110165 cellular anatomical entity No
GO:0003674 molecular_function No
GO:0043169 cation binding No
GO:0005575 cellular_component No
GO:0043167 ion binding No
GO:0004559 alpha-mannosidase activity No
GO:0005488 binding No
GO:0016787 hydrolase activity No
GO:0046872 metal ion binding No
GO:0003824 catalytic activity No
GO:0015924 mannosyl-oligosaccharide mannosidase activity No
GO:0015923 mannosidase activity No
GO:0016798 hydrolase activity, acting on glycosyl bonds No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1432 0.0667 0.7775 0.2419 0.1239 0.0913 0.5703 0.4528 0.4278 0.0093

SignalP

SignalP signal predicted Location Score
Yes 1 - 19 0.999721

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup848
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2312
Ophiocordyceps australis 1348a (Ghana) OphauG2|692
Ophiocordyceps australis map64 (Brazil) OphauB2|1302
Ophiocordyceps camponoti-floridani Ophcf2|02335
Ophiocordyceps camponoti-rufipedis Ophun1|7241
Ophiocordyceps kimflemingae Ophio5|6382
Ophiocordyceps subramaniannii Hirsu2|4613 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4613
MWLAALLPACALLPSTAAAMRADRLAQLRQETVDMFYHGYSNYMRHAFPEDEIGLNDALGNYSLTLIDSLSTLAI
LAGGPQDGSYTGPQALRDFQDGIAQFVAHYGDGRPGPSGTGSRATGFDLDSKVQVFETVIRGVGGLLSAHLFAIG
ELPIPGYVPRPAPGFFPRDDPLELAPIPWPGGFRYDGQLLRLALDLAQRLLPAFYTTTGIPYPRVNLRSGIPFYV
NSPLHHRAAAERREPDAGAGREITETCSAGAGSLTLEPPSGPSGRCGGGGARSA*
Coding >Hirsu2|4613
ATGTGGTTGGCTGCCCTGCTGCCGGCGTGCGCCCTGCTGCCGTCCACGGCGGCCGCCATGCGCGCCGACCGCCTG
GCCCAGCTGCGCCAGGAAACCGTCGACATGTTCTACCACGGCTACAGCAACTACATGCGCCACGCGTTCCCCGAA
GATGAGATCGGGCTGAACGACGCGCTCGGCAACTACTCCCTGACGCTCATCGACAGCCTGTCGACGCTCGCCATC
CTGGCCGGCGGGCCCCAGGACGGCTCCTACACCGGCCCGCAGGCCCTCCGCGACTTCCAGGACGGCATCGCCCAG
TTCGTCGCCCACTACGGCGACGGCCGGCCGGGGCCCTCGGGCACCGGCAGCCGCGCCACGGGCTTCGACCTCGAC
AGCAAGGTCCAGGTCTTCGAGACGGTCATCCGCGGCGTCGGCGGCCTGCTGAGCGCCCACCTGTTCGCCATCGGC
GAGCTGCCCATCCCGGGGTACGTGCCGCGGCCGGCGCCCGGCTTCTTCCCCCGCGACGACCCGCTCGAGCTGGCG
CCGATCCCGTGGCCCGGCGGCTTCCGCTACGACGGCCAGCTGCTGAGGCTGGCCCTCGACCTCGCCCAGCGCCTG
CTGCCCGCCTTCTACACGACGACGGGCATCCCCTACCCCCGCGTCAACCTGCGGTCCGGCATCCCCTTCTACGTC
AACTCGCCCCTGCACCACCGGGCCGCGGCCGAGCGTCGCGAGCCCGACGCCGGCGCCGGCCGGGAGATCACCGAG
ACCTGCAGCGCCGGCGCCGGCAGCCTGACGCTCGAGCCGCCAAGCGGGCCTTCTGGGAGGTGTGGCGGCGGCGGA
GCGAGATCGGCCTGA
Transcript >Hirsu2|4613
ATGTGGTTGGCTGCCCTGCTGCCGGCGTGCGCCCTGCTGCCGTCCACGGCGGCCGCCATGCGCGCCGACCGCCTG
GCCCAGCTGCGCCAGGAAACCGTCGACATGTTCTACCACGGCTACAGCAACTACATGCGCCACGCGTTCCCCGAA
GATGAGATCGGGCTGAACGACGCGCTCGGCAACTACTCCCTGACGCTCATCGACAGCCTGTCGACGCTCGCCATC
CTGGCCGGCGGGCCCCAGGACGGCTCCTACACCGGCCCGCAGGCCCTCCGCGACTTCCAGGACGGCATCGCCCAG
TTCGTCGCCCACTACGGCGACGGCCGGCCGGGGCCCTCGGGCACCGGCAGCCGCGCCACGGGCTTCGACCTCGAC
AGCAAGGTCCAGGTCTTCGAGACGGTCATCCGCGGCGTCGGCGGCCTGCTGAGCGCCCACCTGTTCGCCATCGGC
GAGCTGCCCATCCCGGGGTACGTGCCGCGGCCGGCGCCCGGCTTCTTCCCCCGCGACGACCCGCTCGAGCTGGCG
CCGATCCCGTGGCCCGGCGGCTTCCGCTACGACGGCCAGCTGCTGAGGCTGGCCCTCGACCTCGCCCAGCGCCTG
CTGCCCGCCTTCTACACGACGACGGGCATCCCCTACCCCCGCGTCAACCTGCGGTCCGGCATCCCCTTCTACGTC
AACTCGCCCCTGCACCACCGGGCCGCGGCCGAGCGTCGCGAGCCCGACGCCGGCGCCGGCCGGGAGATCACCGAG
ACCTGCAGCGCCGGCGCCGGCAGCCTGACGCTCGAGCCGCCAAGCGGGCCTTCTGGGAGGTGTGGCGGCGGCGGA
GCGAGATCGGCCTGA
Gene >Hirsu2|4613
ATGTGGTTGGCTGCCCTGCTGCCGGCGTGCGCCCTGCTGCCGTCCACGGCGGCCGCCATGCGCGCCGACCGCCTG
GCCCAGCTGCGCCAGGAAACCGTCGACATGTTCTACCACGGCTACAGCAACTACATGCGCCACGCGTTCCCCGAA
GATGAGGTATCTCCCGCCTTGGCCGGCCTCTTTGGCTCCATTCTCTCCCCCATCTTTTCTTGCAGCCGCCTTGCT
GACGCTCAAACTCCCAAACCCCTTCCCCCTTCAGCTGCGACCGCTTACCTGCACGCCCCTGACGAGAGACCGGCA
CGACCCGACGCAGATCGGGCTGAACGACGCGCTCGGCAACTACTCCCTGACGCTCATCGACAGCCTGTCGACGCT
CGCCATCCTGGCCGGCGGGCCCCAGGACGGCTCCTACACCGGCCCGCAGGCCCTCCGCGACTTCCAGGACGGCAT
CGCCCAGTTCGTCGCCCACTACGGCGACGGCCGGCCGGGGCCCTCGGGCACCGGCAGCCGCGCCACGGGCTTCGA
CCTCGACAGCAAGGTCCAGGTCTTCGAGACGGTCATCCGCGGCGTCGGCGGCCTGCTGAGCGCCCACCTGTTCGC
CATCGGCGAGCTGCCCATCCCGGGGTACGTGCCGCGGCCGGCGCCCGGCTTCTTCCCCCGCGACGACCCGCTCGA
GCTGGCGCCGATCCCGTGGCCCGGCGGCTTCCGCTACGACGGCCAGCTGCTGAGGCTGGCCCTCGACCTCGCCCA
GCGCCTGCTGCCCGCCTTCTACACGACGACGGGCATCCCCTACCCCCGCGTCAACCTGCGGTCCGGCATCCCCTT
CTACGTCAACTCGCCCCTGCACCACCGGGCCGCGGCCGAGCGTCGCGAGCCCGACGCCGGCGCCGGCCGGGAGAT
CACCGAGACCTGCAGCGCCGGCGCCGGCAGCCTGACGCTCGAGTTCACCGTCCTCAGCCGCCTGACGGGCGACGC
GCGCTTCGAGCAGGCCGCCAAGCGGGCCTTCTGGGAGGTGTGGCGGCGGCGGAGCGAGATCGGCCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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