© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4612 |
| Gene name | |
| Location | Contig_2338:95..878 |
| Strand | + |
| Gene length (bp) | 783 |
| Transcript length (bp) | 672 |
| Coding sequence length (bp) | 672 |
| Protein length (aa) | 224 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q04991|FMP42_YEAST | Protein FMP42 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FMP42 PE=1 SV=1 | 1 | 170 | 7.0E-33 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Lysosome/Vacuole | Transmembrane domain | 0.0823 | 0.0762 | 0.0503 | 0.4366 | 0.0791 | 0.0101 | 0.0554 | 0.7861 | 0.1854 | 0.0151 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 27 | 22 |
| 2 | 42 | 64 | 22 |
| 3 | 67 | 89 | 22 |
| 4 | 94 | 116 | 22 |
| 5 | 129 | 149 | 20 |
| 6 | 164 | 186 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 7037 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps australis 1348a (Ghana) | OphauG2|2382 |
| Ophiocordyceps australis map64 (Brazil) | OphauB2|3832 |
| Ophiocordyceps subramaniannii | Hirsu2|4612 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4612 MRTPWFLLLLLLTALQMLRMNHFIATVRAQYAYLLASDRDAAAINSFFDAALPVSGVAATPLVAAVLNSFSVAAV LAILTACIAVNGLLNCLPFLWAGFATVLEFVTLRPFYYSAVSHTATQMFGFETFGLIYGTIICAAGLVNAFQSAL DSLMYGPLGGNPTPINMALAGAGTVVGAFFAAFVAIKSRRWRESSQQGSLSERLSLIQDDDREYGTSIIQRIQ* |
| Coding | >Hirsu2|4612 ATGCGCACGCCCTGGTTCCTGCTGCTGCTGCTGCTGACGGCGCTGCAGATGCTGCGGATGAACCACTTCATCGCC ACCGTCCGCGCCCAGTACGCCTACCTGCTGGCCTCGGACCGCGACGCCGCCGCCATCAACAGCTTCTTCGACGCC GCCCTGCCCGTCAGCGGCGTCGCCGCCACGCCCCTCGTCGCCGCCGTCCTCAACAGCTTCAGCGTCGCCGCCGTG CTCGCCATCCTCACCGCCTGCATCGCCGTCAACGGCCTGCTCAACTGCCTGCCCTTCCTGTGGGCCGGCTTCGCC ACCGTCCTCGAGTTCGTCACCCTGCGCCCCTTTTACTACTCGGCCGTCTCACACACGGCCACCCAGATGTTCGGC TTCGAGACCTTCGGCCTCATCTACGGCACCATCATCTGTGCCGCCGGCCTCGTCAACGCCTTTCAGTCCGCGCTC GACTCCCTCATGTATGGCCCGCTCGGCGGGAACCCGACCCCGATCAACATGGCCCTGGCCGGCGCCGGCACCGTC GTCGGCGCCTTCTTCGCCGCCTTCGTCGCCATCAAGAGCCGCCGCTGGCGGGAATCGTCCCAGCAGGGCTCCCTG AGCGAGCGTCTGAGCCTCATCCAGGACGACGACCGCGAGTACGGCACCTCCATCATCCAGCGCATACAGTGA |
| Transcript | >Hirsu2|4612 ATGCGCACGCCCTGGTTCCTGCTGCTGCTGCTGCTGACGGCGCTGCAGATGCTGCGGATGAACCACTTCATCGCC ACCGTCCGCGCCCAGTACGCCTACCTGCTGGCCTCGGACCGCGACGCCGCCGCCATCAACAGCTTCTTCGACGCC GCCCTGCCCGTCAGCGGCGTCGCCGCCACGCCCCTCGTCGCCGCCGTCCTCAACAGCTTCAGCGTCGCCGCCGTG CTCGCCATCCTCACCGCCTGCATCGCCGTCAACGGCCTGCTCAACTGCCTGCCCTTCCTGTGGGCCGGCTTCGCC ACCGTCCTCGAGTTCGTCACCCTGCGCCCCTTTTACTACTCGGCCGTCTCACACACGGCCACCCAGATGTTCGGC TTCGAGACCTTCGGCCTCATCTACGGCACCATCATCTGTGCCGCCGGCCTCGTCAACGCCTTTCAGTCCGCGCTC GACTCCCTCATGTATGGCCCGCTCGGCGGGAACCCGACCCCGATCAACATGGCCCTGGCCGGCGCCGGCACCGTC GTCGGCGCCTTCTTCGCCGCCTTCGTCGCCATCAAGAGCCGCCGCTGGCGGGAATCGTCCCAGCAGGGCTCCCTG AGCGAGCGTCTGAGCCTCATCCAGGACGACGACCGCGAGTACGGCACCTCCATCATCCAGCGCATACAGTGA |
| Gene | >Hirsu2|4612 ATGCGCACGCCCTGGTTCCTGCTGCTGCTGCTGCTGACGGCGCTGCAGATGCTGCGGATGAACCACTTCATCGCC ACCGTCCGCGCCCAGTACGCCTACCTGCTGGCCTCGGACCGCGACGCCGCCGCCATCAACAGCTTCTTCGACGCC GCCCTGCCCGTCAGCGGCGTCGCCGCCACGCCCCTCGTCGCCGCCGTCCTCAACAGCTTCAGCGTCGCCGCCGTG CTCGCCATCCTCACCGCCTGCATCGCCGTCAACGGCCTGCTCAACTGCCTGCCCTTCCTGTGGGCCGGCTTCGCC ACCGTCCTCGAGTTCGTCACCCTGCGCCCCTTTTACTACTCGGCCGTCTCGTGAGTTCTTCTCTCCTCTTCACCA AGACGGGAGGAAAAAAAAAAAGTGAAACCGTCCATGGATCGGTATGTTTCTGACACGTTTTGCTGCTTGCGCTCC CCCGGCCCAAGACACACGGCCACCCAGATGTTCGGCTTCGAGACCTTCGGCCTCATCTACGGCACCATCATCTGT GCCGCCGGCCTCGTCAACGCCTTTCAGTCCGCGCTCGACTCCCTCATGTATGGCCCGCTCGGCGGGAACCCGACC CCGATCAACATGGCCCTGGCCGGCGCCGGCACCGTCGTCGGCGCCTTCTTCGCCGCCTTCGTCGCCATCAAGAGC CGCCGCTGGCGGGAATCGTCCCAGCAGGGCTCCCTGAGCGAGCGTCTGAGCCTCATCCAGGACGACGACCGCGAG TACGGCACCTCCATCATCCAGCGCATACAGTGA |