Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|4612
Gene name
Location	Contig_2338:95..878
Strand	+
Gene length (bp)	783
Transcript length (bp)	672
Coding sequence length (bp)	672
Protein length (aa)	224

PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q04991\|FMP42_YEAST	Protein FMP42 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FMP42 PE=1 SV=1	1	170	7.0E-33

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 30	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	5	27	22
2	42	64	22
3	67	89	22
4	94	116	22
5	129	149	20
6	164	186	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|4612 MRTPWFLLLLLLTALQMLRMNHFIATVRAQYAYLLASDRDAAAINSFFDAALPVSGVAATPLVAAVLNSFSVAAV LAILTACIAVNGLLNCLPFLWAGFATVLEFVTLRPFYYSAVSHTATQMFGFETFGLIYGTIICAAGLVNAFQSAL DSLMYGPLGGNPTPINMALAGAGTVVGAFFAAFVAIKSRRWRESSQQGSLSERLSLIQDDDREYGTSIIQRIQ*
Coding	>Hirsu2\|4612 ATGCGCACGCCCTGGTTCCTGCTGCTGCTGCTGCTGACGGCGCTGCAGATGCTGCGGATGAACCACTTCATCGCC ACCGTCCGCGCCCAGTACGCCTACCTGCTGGCCTCGGACCGCGACGCCGCCGCCATCAACAGCTTCTTCGACGCC GCCCTGCCCGTCAGCGGCGTCGCCGCCACGCCCCTCGTCGCCGCCGTCCTCAACAGCTTCAGCGTCGCCGCCGTG CTCGCCATCCTCACCGCCTGCATCGCCGTCAACGGCCTGCTCAACTGCCTGCCCTTCCTGTGGGCCGGCTTCGCC ACCGTCCTCGAGTTCGTCACCCTGCGCCCCTTTTACTACTCGGCCGTCTCACACACGGCCACCCAGATGTTCGGC TTCGAGACCTTCGGCCTCATCTACGGCACCATCATCTGTGCCGCCGGCCTCGTCAACGCCTTTCAGTCCGCGCTC GACTCCCTCATGTATGGCCCGCTCGGCGGGAACCCGACCCCGATCAACATGGCCCTGGCCGGCGCCGGCACCGTC GTCGGCGCCTTCTTCGCCGCCTTCGTCGCCATCAAGAGCCGCCGCTGGCGGGAATCGTCCCAGCAGGGCTCCCTG AGCGAGCGTCTGAGCCTCATCCAGGACGACGACCGCGAGTACGGCACCTCCATCATCCAGCGCATACAGTGA
Transcript	>Hirsu2\|4612 ATGCGCACGCCCTGGTTCCTGCTGCTGCTGCTGCTGACGGCGCTGCAGATGCTGCGGATGAACCACTTCATCGCC ACCGTCCGCGCCCAGTACGCCTACCTGCTGGCCTCGGACCGCGACGCCGCCGCCATCAACAGCTTCTTCGACGCC GCCCTGCCCGTCAGCGGCGTCGCCGCCACGCCCCTCGTCGCCGCCGTCCTCAACAGCTTCAGCGTCGCCGCCGTG CTCGCCATCCTCACCGCCTGCATCGCCGTCAACGGCCTGCTCAACTGCCTGCCCTTCCTGTGGGCCGGCTTCGCC ACCGTCCTCGAGTTCGTCACCCTGCGCCCCTTTTACTACTCGGCCGTCTCACACACGGCCACCCAGATGTTCGGC TTCGAGACCTTCGGCCTCATCTACGGCACCATCATCTGTGCCGCCGGCCTCGTCAACGCCTTTCAGTCCGCGCTC GACTCCCTCATGTATGGCCCGCTCGGCGGGAACCCGACCCCGATCAACATGGCCCTGGCCGGCGCCGGCACCGTC GTCGGCGCCTTCTTCGCCGCCTTCGTCGCCATCAAGAGCCGCCGCTGGCGGGAATCGTCCCAGCAGGGCTCCCTG AGCGAGCGTCTGAGCCTCATCCAGGACGACGACCGCGAGTACGGCACCTCCATCATCCAGCGCATACAGTGA
Gene	>Hirsu2\|4612 ATGCGCACGCCCTGGTTCCTGCTGCTGCTGCTGCTGACGGCGCTGCAGATGCTGCGGATGAACCACTTCATCGCC ACCGTCCGCGCCCAGTACGCCTACCTGCTGGCCTCGGACCGCGACGCCGCCGCCATCAACAGCTTCTTCGACGCC GCCCTGCCCGTCAGCGGCGTCGCCGCCACGCCCCTCGTCGCCGCCGTCCTCAACAGCTTCAGCGTCGCCGCCGTG CTCGCCATCCTCACCGCCTGCATCGCCGTCAACGGCCTGCTCAACTGCCTGCCCTTCCTGTGGGCCGGCTTCGCC ACCGTCCTCGAGTTCGTCACCCTGCGCCCCTTTTACTACTCGGCCGTCTCGTGAGTTCTTCTCTCCTCTTCACCA AGACGGGAGGAAAAAAAAAAAGTGAAACCGTCCATGGATCGGTATGTTTCTGACACGTTTTGCTGCTTGCGCTCC CCCGGCCCAAGACACACGGCCACCCAGATGTTCGGCTTCGAGACCTTCGGCCTCATCTACGGCACCATCATCTGT GCCGCCGGCCTCGTCAACGCCTTTCAGTCCGCGCTCGACTCCCTCATGTATGGCCCGCTCGGCGGGAACCCGACC CCGATCAACATGGCCCTGGCCGGCGCCGGCACCGTCGTCGGCGCCTTCTTCGCCGCCTTCGTCGCCATCAAGAGC CGCCGCTGGCGGGAATCGTCCCAGCAGGGCTCCCTGAGCGAGCGTCTGAGCCTCATCCAGGACGACGACCGCGAG TACGGCACCTCCATCATCCAGCGCATACAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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