Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4603
Gene name
LocationContig_233:19840..20716
Strand-
Gene length (bp)876
Transcript length (bp)876
Coding sequence length (bp)876
Protein length (aa) 292

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1422 0.0975 0.8619 0.1591 0.0713 0.0188 0.3848 0.2773 0.166 0.0009

SignalP

SignalP signal predicted Location Score
Yes 1 - 20 0.999726

Transmembrane Domains

Domain # Start End Length
1 5 23 18

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup9664
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|4603 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4603
MATVSYMYLLLSLFAATVWAGGYQGCLERVMLFQAYEIDALNPPSDQTVGFRCTRFNTQTKKCSGHWEPCKKRNN
AAGRCDFDEMMVHLGRAPRQTGWARYNAATGRLDAEATAKNCYRIFAAQGGNAKVPNFQPYKALKGATGEYNDYI
MQLSKVVNDAWWKKKRDNNKHQWAEFDSTVRLINIARTGDHGKYLIPAVEQGLGHIMNIKRKSLGNHPVTGEGWE
TVDWKETAAAAKKAGVADYHTHFTHVLNDLYRGTQTDNNHKSFRDHHQVIRSYKRVEDRSRSCRKH*
Coding >Hirsu2|4603
ATGGCGACCGTCTCCTACATGTACCTGCTCCTCTCCCTCTTTGCGGCGACGGTCTGGGCCGGGGGATACCAAGGA
TGCCTGGAGCGCGTCATGCTCTTCCAGGCCTACGAGATTGACGCCCTTAACCCGCCAAGCGACCAGACCGTGGGC
TTTCGGTGCACCAGATTTAATACGCAAACCAAAAAATGCTCGGGCCACTGGGAACCGTGCAAGAAGAGAAACAAC
GCAGCCGGCAGATGCGATTTCGACGAAATGATGGTTCATTTGGGAAGAGCCCCGAGGCAGACTGGCTGGGCCCGT
TACAATGCAGCAACGGGGAGACTCGACGCCGAGGCTACGGCCAAGAACTGCTATCGTATTTTCGCGGCTCAAGGC
GGAAACGCCAAGGTGCCCAACTTTCAGCCATACAAAGCCTTGAAGGGCGCGACCGGAGAGTACAATGACTATATC
ATGCAGCTCAGTAAAGTGGTCAACGATGCGTGGTGGAAGAAGAAGCGGGACAACAATAAGCATCAATGGGCGGAG
TTCGACAGCACCGTGCGCCTGATCAACATCGCGCGGACCGGGGACCACGGCAAGTACCTCATCCCTGCGGTAGAA
CAAGGCCTTGGACACATCATGAATATCAAGCGAAAGTCGCTGGGCAATCATCCCGTTACGGGAGAAGGGTGGGAA
ACGGTCGACTGGAAAGAAACGGCCGCGGCTGCTAAGAAAGCGGGCGTGGCAGACTATCATACGCACTTCACGCAC
GTTCTAAATGATTTATATAGAGGGACACAGACGGACAATAACCATAAATCATTCAGGGATCACCACCAGGTGATA
AGGTCGTACAAGCGGGTGGAAGATCGGTCTAGGTCATGCCGCAAGCATTGA
Transcript >Hirsu2|4603
ATGGCGACCGTCTCCTACATGTACCTGCTCCTCTCCCTCTTTGCGGCGACGGTCTGGGCCGGGGGATACCAAGGA
TGCCTGGAGCGCGTCATGCTCTTCCAGGCCTACGAGATTGACGCCCTTAACCCGCCAAGCGACCAGACCGTGGGC
TTTCGGTGCACCAGATTTAATACGCAAACCAAAAAATGCTCGGGCCACTGGGAACCGTGCAAGAAGAGAAACAAC
GCAGCCGGCAGATGCGATTTCGACGAAATGATGGTTCATTTGGGAAGAGCCCCGAGGCAGACTGGCTGGGCCCGT
TACAATGCAGCAACGGGGAGACTCGACGCCGAGGCTACGGCCAAGAACTGCTATCGTATTTTCGCGGCTCAAGGC
GGAAACGCCAAGGTGCCCAACTTTCAGCCATACAAAGCCTTGAAGGGCGCGACCGGAGAGTACAATGACTATATC
ATGCAGCTCAGTAAAGTGGTCAACGATGCGTGGTGGAAGAAGAAGCGGGACAACAATAAGCATCAATGGGCGGAG
TTCGACAGCACCGTGCGCCTGATCAACATCGCGCGGACCGGGGACCACGGCAAGTACCTCATCCCTGCGGTAGAA
CAAGGCCTTGGACACATCATGAATATCAAGCGAAAGTCGCTGGGCAATCATCCCGTTACGGGAGAAGGGTGGGAA
ACGGTCGACTGGAAAGAAACGGCCGCGGCTGCTAAGAAAGCGGGCGTGGCAGACTATCATACGCACTTCACGCAC
GTTCTAAATGATTTATATAGAGGGACACAGACGGACAATAACCATAAATCATTCAGGGATCACCACCAGGTGATA
AGGTCGTACAAGCGGGTGGAAGATCGGTCTAGGTCATGCCGCAAGCATTGA
Gene >Hirsu2|4603
ATGGCGACCGTCTCCTACATGTACCTGCTCCTCTCCCTCTTTGCGGCGACGGTCTGGGCCGGGGGATACCAAGGA
TGCCTGGAGCGCGTCATGCTCTTCCAGGCCTACGAGATTGACGCCCTTAACCCGCCAAGCGACCAGACCGTGGGC
TTTCGGTGCACCAGATTTAATACGCAAACCAAAAAATGCTCGGGCCACTGGGAACCGTGCAAGAAGAGAAACAAC
GCAGCCGGCAGATGCGATTTCGACGAAATGATGGTTCATTTGGGAAGAGCCCCGAGGCAGACTGGCTGGGCCCGT
TACAATGCAGCAACGGGGAGACTCGACGCCGAGGCTACGGCCAAGAACTGCTATCGTATTTTCGCGGCTCAAGGC
GGAAACGCCAAGGTGCCCAACTTTCAGCCATACAAAGCCTTGAAGGGCGCGACCGGAGAGTACAATGACTATATC
ATGCAGCTCAGTAAAGTGGTCAACGATGCGTGGTGGAAGAAGAAGCGGGACAACAATAAGCATCAATGGGCGGAG
TTCGACAGCACCGTGCGCCTGATCAACATCGCGCGGACCGGGGACCACGGCAAGTACCTCATCCCTGCGGTAGAA
CAAGGCCTTGGACACATCATGAATATCAAGCGAAAGTCGCTGGGCAATCATCCCGTTACGGGAGAAGGGTGGGAA
ACGGTCGACTGGAAAGAAACGGCCGCGGCTGCTAAGAAAGCGGGCGTGGCAGACTATCATACGCACTTCACGCAC
GTTCTAAATGATTTATATAGAGGGACACAGACGGACAATAACCATAAATCATTCAGGGATCACCACCAGGTGATA
AGGTCGTACAAGCGGGTGGAAGATCGGTCTAGGTCATGCCGCAAGCATTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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