Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|4598
Gene name
Location	Contig_233:6904..7487
Strand	-
Gene length (bp)	583
Transcript length (bp)	492
Coding sequence length (bp)	492
Protein length (aa)	164

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01284	MARVEL	Membrane-associating domain	1.1E-09	6	133

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0016020	membrane	Yes
GO:0005575	cellular_component	No
GO:0110165	cellular anatomical entity	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	10	32	22
2	41	63	22
3	83	105	22
4	118	140	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|4598 MGRTTTLSLRIFQGLLAAANLALSAYVVNWYLTVTRRGAPASLSFLVFASSFSLLSLLWLELAPRLLPAAAAHAC GTLSVEATNAVFYFAAFIAHAVFLGGLSMCHGTVCTAGRVDSVVAAAAFCAWIASTIFTAKAMFINGDARRRPAD SNKSTQMGEAAIA*
Coding	>Hirsu2\|4598 ATGGGTCGAACGACGACGCTTTCCCTGCGCATCTTCCAGGGCCTGCTGGCCGCGGCCAACCTCGCCCTGTCGGCA TATGTCGTCAACTGGTACCTCACGGTGACGCGCCGCGGCGCGCCCGCCTCGCTCAGCTTCCTCGTCTTCGCCTCG AGCTTCTCGCTGCTGTCGCTGCTCTGGCTCGAGCTGGCGCCGCGACTGCTGCCCGCCGCCGCCGCCCACGCGTGC GGCACGCTGAGCGTCGAGGCCACCAACGCCGTCTTCTACTTCGCCGCCTTCATCGCCCACGCCGTCTTCCTCGGC GGCCTGTCCATGTGCCACGGCACCGTCTGCACCGCCGGCCGCGTCGACTCCGTCGTCGCCGCCGCCGCCTTCTGC GCCTGGATCGCCTCCACCATCTTCACCGCAAAGGCCATGTTCATCAACGGCGACGCCCGCCGCCGGCCCGCCGAC AGCAATAAGTCCACCCAGATGGGCGAGGCCGCCATCGCCTAG
Transcript	>Hirsu2\|4598 ATGGGTCGAACGACGACGCTTTCCCTGCGCATCTTCCAGGGCCTGCTGGCCGCGGCCAACCTCGCCCTGTCGGCA TATGTCGTCAACTGGTACCTCACGGTGACGCGCCGCGGCGCGCCCGCCTCGCTCAGCTTCCTCGTCTTCGCCTCG AGCTTCTCGCTGCTGTCGCTGCTCTGGCTCGAGCTGGCGCCGCGACTGCTGCCCGCCGCCGCCGCCCACGCGTGC GGCACGCTGAGCGTCGAGGCCACCAACGCCGTCTTCTACTTCGCCGCCTTCATCGCCCACGCCGTCTTCCTCGGC GGCCTGTCCATGTGCCACGGCACCGTCTGCACCGCCGGCCGCGTCGACTCCGTCGTCGCCGCCGCCGCCTTCTGC GCCTGGATCGCCTCCACCATCTTCACCGCAAAGGCCATGTTCATCAACGGCGACGCCCGCCGCCGGCCCGCCGAC AGCAATAAGTCCACCCAGATGGGCGAGGCCGCCATCGCCTAG
Gene	>Hirsu2\|4598 ATGGGTCGAACGACGACGCTTTCCCTGCGCATCTTCCAGGGCCTGCTGGCCGCGGCCAACCTCGCCCTGTCGGCA TATGGTACGCTCTCTGCTGTCTTGTCACGTCGTCGCCTTCTCCCTCAACCCTCCCAAACTTCTTTAACTTCTCTA ACTTCTCGGGGACAAAAAAGTCGTCAACTGGTACCTCACGGTGACGCGCCGCGGCGCGCCCGCCTCGCTCAGCTT CCTCGTCTTCGCCTCGAGCTTCTCGCTGCTGTCGCTGCTCTGGCTCGAGCTGGCGCCGCGACTGCTGCCCGCCGC CGCCGCCCACGCGTGCGGCACGCTGAGCGTCGAGGCCACCAACGCCGTCTTCTACTTCGCCGCCTTCATCGCCCA CGCCGTCTTCCTCGGCGGCCTGTCCATGTGCCACGGCACCGTCTGCACCGCCGGCCGCGTCGACTCCGTCGTCGC CGCCGCCGCCTTCTGCGCCTGGATCGCCTCCACCATCTTCACCGCAAAGGCCATGTTCATCAACGGCGACGCCCG CCGCCGGCCCGCCGACAGCAATAAGTCCACCCAGATGGGCGAGGCCGCCATCGCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail