Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|4564
Gene name
Location	Contig_231:16084..16784
Strand	+
Gene length (bp)	700
Transcript length (bp)	660
Coding sequence length (bp)	660
Protein length (aa)	220

PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q5BHG4\|LBUA_EMENI	Lactobacillus up-regulated protein OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=lbuA PE=1 SV=2	77	206	4.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|4564 MKTIFSVAVFCQISALFLPADHDLATGLLTAPCFSPQVIGSPVTTESADIAAEHANMRYVPGGVSDVANGMKFED DGVFSLGTDGVLRTFTKGRDVIDYRQLDPEQAKELANKQIDGWQRGPDPIPASLLTVAGSSVDGRLVTDIEKLMN PKEKPARSHGQSQKSQPGKSRRAPAELFRRAGPHVCPGQPGCSSIADCTPHHCHACFFPHGPPHGTCFQ*
Coding	>Hirsu2\|4564 ATGAAGACCATCTTCTCTGTCGCCGTCTTCTGCCAAATCTCGGCCCTGTTCCTGCCAGCGGACCATGACCTGGCG ACTGGGCTGCTGACTGCTCCTTGCTTTTCCCCCCAGGTGATCGGCTCACCCGTGACAACTGAGTCTGCGGATATC GCGGCTGAACATGCGAACATGCGCTATGTTCCTGGTGGCGTGAGTGACGTCGCCAACGGCATGAAGTTCGAAGAC GACGGCGTCTTCAGCCTCGGCACGGACGGCGTGCTCCGCACCTTCACCAAGGGCCGCGATGTCATCGACTACCGT CAGCTCGATCCCGAGCAGGCCAAGGAGCTGGCAAATAAGCAGATAGACGGATGGCAGCGCGGTCCCGATCCCATC CCAGCCTCGCTCCTCACCGTGGCCGGATCTTCCGTGGACGGCCGCCTCGTCACCGACATCGAAAAGCTCATGAAC CCCAAGGAGAAGCCAGCTCGTTCTCACGGCCAGTCGCAGAAGTCCCAGCCTGGGAAGTCTCGCCGCGCCCCTGCG GAACTATTTCGTCGAGCGGGCCCTCATGTGTGCCCCGGACAGCCAGGTTGCTCGAGCATCGCTGACTGCACGCCT CACCACTGCCACGCCTGTTTCTTTCCTCATGGCCCACCTCACGGAACTTGCTTTCAGTAA
Transcript	>Hirsu2\|4564 ATGAAGACCATCTTCTCTGTCGCCGTCTTCTGCCAAATCTCGGCCCTGTTCCTGCCAGCGGACCATGACCTGGCG ACTGGGCTGCTGACTGCTCCTTGCTTTTCCCCCCAGGTGATCGGCTCACCCGTGACAACTGAGTCTGCGGATATC GCGGCTGAACATGCGAACATGCGCTATGTTCCTGGTGGCGTGAGTGACGTCGCCAACGGCATGAAGTTCGAAGAC GACGGCGTCTTCAGCCTCGGCACGGACGGCGTGCTCCGCACCTTCACCAAGGGCCGCGATGTCATCGACTACCGT CAGCTCGATCCCGAGCAGGCCAAGGAGCTGGCAAATAAGCAGATAGACGGATGGCAGCGCGGTCCCGATCCCATC CCAGCCTCGCTCCTCACCGTGGCCGGATCTTCCGTGGACGGCCGCCTCGTCACCGACATCGAAAAGCTCATGAAC CCCAAGGAGAAGCCAGCTCGTTCTCACGGCCAGTCGCAGAAGTCCCAGCCTGGGAAGTCTCGCCGCGCCCCTGCG GAACTATTTCGTCGAGCGGGCCCTCATGTGTGCCCCGGACAGCCAGGTTGCTCGAGCATCGCTGACTGCACGCCT CACCACTGCCACGCCTGTTTCTTTCCTCATGGCCCACCTCACGGAACTTGCTTTCAGTAA
Gene	>Hirsu2\|4564 ATGAAGACCATCTTCTCTGTCGCCGTCTTCTGCCAAATCTCGGCCCTGTTCCTGCCAGCGGTACGCTTTCCTTCA AACACAATACTACCTTTTCGCTCAGGACCATGACCTGGCGACTGGGCTGCTGACTGCTCCTTGCTTTTCCCCCCA GGTGATCGGCTCACCCGTGACAACTGAGTCTGCGGATATCGCGGCTGAACATGCGAACATGCGCTATGTTCCTGG TGGCGTGAGTGACGTCGCCAACGGCATGAAGTTCGAAGACGACGGCGTCTTCAGCCTCGGCACGGACGGCGTGCT CCGCACCTTCACCAAGGGCCGCGATGTCATCGACTACCGTCAGCTCGATCCCGAGCAGGCCAAGGAGCTGGCAAA TAAGCAGATAGACGGATGGCAGCGCGGTCCCGATCCCATCCCAGCCTCGCTCCTCACCGTGGCCGGATCTTCCGT GGACGGCCGCCTCGTCACCGACATCGAAAAGCTCATGAACCCCAAGGAGAAGCCAGCTCGTTCTCACGGCCAGTC GCAGAAGTCCCAGCCTGGGAAGTCTCGCCGCGCCCCTGCGGAACTATTTCGTCGAGCGGGCCCTCATGTGTGCCC CGGACAGCCAGGTTGCTCGAGCATCGCTGACTGCACGCCTCACCACTGCCACGCCTGTTTCTTTCCTCATGGCCC ACCTCACGGAACTTGCTTTCAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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