Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|4512
Gene name
Location	Contig_2298:1017..2417
Strand	+
Gene length (bp)	1400
Transcript length (bp)	1278
Coding sequence length (bp)	1278
Protein length (aa)	426

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF07798	CCDC90-like	Coiled-coil domain-containing protein 90-like	8.6E-50	207	380

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O42997\|YBC7_SCHPO	Uncharacterized protein C27B12.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pi071 PE=4 SV=1	163	376	3.0E-09

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 17	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	364	386	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|4512 MSTGRLTFLYPHLVRSAARPLGTTAKRTKGSFAPRHGKAVEPAAWEERQKQKEQQQQQQQRRRPQLSPSSSLSSS SSSSSSPQPPPPPQSKQSNAIRTRTAEPDRVSAGEPLPARQDEAPGLPPAPKQAPRPKPTLLPALPEKLGRAPSA ATENGRFNRDGSSERLRPTGSQPRDSSPLEAVLLTQPPERESAQHPSMSPPPYVHHFDSYSLVKQLQEGGYSQEQ ATTAMKAIRTLLAQNLDVAQQSLVSKSDVENETYLFTAACSELSAEIKNNRRLRDEQMRQQRTHLQHEVDILTQS LNQELLTLTDNVRGMFNDRKMTVREEHKAVESAIQKINYKMSILLSSDCKSEIEGVRWILIRRSVLGIIFMAILT LGMLRYATYLGQKRKLEAEKKKKEREELRRDGGKTDHSAAADAAAILAAN*
Coding	>Hirsu2\|4512 ATGTCGACGGGCCGACTCACCTTCCTCTACCCGCACCTGGTGCGCAGCGCCGCGAGGCCGCTGGGGACGACGGCC AAGCGGACCAAGGGATCCTTCGCCCCGCGCCACGGCAAGGCCGTTGAGCCCGCCGCCTGGGAAGAGCGCCAGAAG CAAAAGGAGCAGCAGCAGCAGCAGCAGCAGAGACGGCGGCCGCAGCTCTCCCCTTCTTCGTCCTTGTCCTCGTCC TCGTCCTCGTCCTCGTCGCCGCAGCCGCCGCCGCCGCCGCAGTCGAAGCAGTCAAACGCGATCAGGACCAGAACA GCCGAGCCGGACCGCGTGAGCGCGGGCGAACCTTTACCGGCGAGACAAGACGAGGCACCAGGGTTGCCACCGGCT CCCAAGCAGGCGCCTCGGCCCAAGCCGACGCTGCTGCCCGCCCTCCCCGAAAAGCTTGGTCGGGCCCCCAGCGCA GCGACCGAGAATGGCCGATTCAACAGAGACGGCTCGTCCGAACGGCTGCGGCCGACGGGGAGCCAGCCCAGGGAC AGCAGCCCGCTCGAGGCGGTGCTTCTCACACAGCCGCCCGAGCGCGAGTCGGCTCAGCATCCGTCCATGTCCCCC CCGCCCTATGTGCACCACTTCGACAGCTACTCCCTCGTCAAGCAGCTGCAGGAGGGCGGCTACTCGCAGGAGCAG GCGACGACGGCCATGAAGGCCATCCGGACCCTGCTGGCCCAGAACCTGGACGTGGCACAGCAGAGCCTGGTGAGC AAGAGCGACGTGGAAAACGAAACCTATCTCTTCACCGCTGCCTGCTCCGAGCTGAGCGCCGAGATCAAGAACAAT CGGAGGCTGCGGGACGAGCAGATGCGGCAGCAGAGGACGCATCTGCAGCACGAGGTGGACATTTTGACGCAGTCG CTCAACCAAGAGCTGCTGACGCTGACCGACAACGTCCGCGGCATGTTCAACGACCGCAAGATGACGGTCCGGGAG GAGCACAAGGCCGTGGAGAGCGCGATCCAGAAGATCAACTACAAGATGAGCATCCTGCTCAGCAGCGACTGCAAG TCGGAGATTGAGGGCGTCCGCTGGATCCTGATCAGGCGGTCCGTGCTGGGCATCATCTTCATGGCCATCCTGACG CTCGGCATGCTGCGCTACGCCACCTACCTCGGACAGAAGAGGAAGCTGGAGGCGGAAAAGAAGAAGAAGGAGCGG GAGGAGCTGAGGAGGGACGGCGGCAAGACGGACCACAGCGCGGCGGCGGACGCGGCCGCCATCCTGGCCGCCAAT TAG
Transcript	>Hirsu2\|4512 ATGTCGACGGGCCGACTCACCTTCCTCTACCCGCACCTGGTGCGCAGCGCCGCGAGGCCGCTGGGGACGACGGCC AAGCGGACCAAGGGATCCTTCGCCCCGCGCCACGGCAAGGCCGTTGAGCCCGCCGCCTGGGAAGAGCGCCAGAAG CAAAAGGAGCAGCAGCAGCAGCAGCAGCAGAGACGGCGGCCGCAGCTCTCCCCTTCTTCGTCCTTGTCCTCGTCC TCGTCCTCGTCCTCGTCGCCGCAGCCGCCGCCGCCGCCGCAGTCGAAGCAGTCAAACGCGATCAGGACCAGAACA GCCGAGCCGGACCGCGTGAGCGCGGGCGAACCTTTACCGGCGAGACAAGACGAGGCACCAGGGTTGCCACCGGCT CCCAAGCAGGCGCCTCGGCCCAAGCCGACGCTGCTGCCCGCCCTCCCCGAAAAGCTTGGTCGGGCCCCCAGCGCA GCGACCGAGAATGGCCGATTCAACAGAGACGGCTCGTCCGAACGGCTGCGGCCGACGGGGAGCCAGCCCAGGGAC AGCAGCCCGCTCGAGGCGGTGCTTCTCACACAGCCGCCCGAGCGCGAGTCGGCTCAGCATCCGTCCATGTCCCCC CCGCCCTATGTGCACCACTTCGACAGCTACTCCCTCGTCAAGCAGCTGCAGGAGGGCGGCTACTCGCAGGAGCAG GCGACGACGGCCATGAAGGCCATCCGGACCCTGCTGGCCCAGAACCTGGACGTGGCACAGCAGAGCCTGGTGAGC AAGAGCGACGTGGAAAACGAAACCTATCTCTTCACCGCTGCCTGCTCCGAGCTGAGCGCCGAGATCAAGAACAAT CGGAGGCTGCGGGACGAGCAGATGCGGCAGCAGAGGACGCATCTGCAGCACGAGGTGGACATTTTGACGCAGTCG CTCAACCAAGAGCTGCTGACGCTGACCGACAACGTCCGCGGCATGTTCAACGACCGCAAGATGACGGTCCGGGAG GAGCACAAGGCCGTGGAGAGCGCGATCCAGAAGATCAACTACAAGATGAGCATCCTGCTCAGCAGCGACTGCAAG TCGGAGATTGAGGGCGTCCGCTGGATCCTGATCAGGCGGTCCGTGCTGGGCATCATCTTCATGGCCATCCTGACG CTCGGCATGCTGCGCTACGCCACCTACCTCGGACAGAAGAGGAAGCTGGAGGCGGAAAAGAAGAAGAAGGAGCGG GAGGAGCTGAGGAGGGACGGCGGCAAGACGGACCACAGCGCGGCGGCGGACGCGGCCGCCATCCTGGCCGCCAAT TAG
Gene	>Hirsu2\|4512 ATGTCGACGGGCCGACTCACCTTCCTCTACCCGCACCTGGTGCGCAGCGCCGCGAGGCCGCTGGGGACGACGGCC AAGCGGACCAAGGGATCCTTCGCCCCGCGCCACGGCAAGGCCGTTGAGCCCGCCGCCTGGGAAGAGCGCCAGAAG CAAAAGGAGCAGCAGCAGCAGCAGCAGCAGAGACGGCGGCCGCAGCTCTCCCCTTCTTCGTCCTTGTCCTCGTCC TCGTCCTCGTCCTCGTCGCCGCAGCCGCCGCCGCCGCCGCAGTCGAAGCAGTCAAACGCGATCAGGACCAGAACA GCCGAGCCGGACCGCGTGAGCGCGGGCGAACCTTTACCGGCGAGACAAGACGAGGCACCAGGGTTGCCACCGGCT CCCAAGCAGGCGCCTCGGCCCAAGCCGACGCTGCTGCCCGCCCTCCCCGAAAAGCTTGGTCGGGCCCCCAGCGCA GCGACCGAGAATGGCCGATTCAACAGAGACGGCTCGTCCGAACGGCTGCGGCCGACGGGGAGCCAGCCCAGGGAC AGCAGCCCGCTCGAGGCGGTGCTTCTCACACAGCCGCCCGAGCGCGAGTCGGCTCAGCATCCGTCCATGTCCCCC CCGCCCTATGTGCACCACTTCGACAGCTACTCCCTCGTCAAGCAGCTGCAGGAGGGCGGCTACTCGCAGGAGCAG GCGACGACGGCCATGAAGGCCATCCGGACCCTGCTGGCCCAGAACCTGGACGTGGCACAGCAGAGCCTGGTGAGC AAGAGCGACGTGGAAAACGTACGGCATGCTCCCCCGCCCATCAGCCCGCTTCGGATGCTGACGCACGGCAGGAAA CCTATCTCTTCACCGCTGCCTGCTCCGAGCTGAGCGCCGAGATCAAGAACAATCGGAGGCTGCGGGACGAGCAGA TGCGGCAGCAGAGGACGCATCTGCAGCACGAGGTGGACATTTTGACGCAGTCGCTCAACCAAGAGCTGCTGACGC TGACCGACAACGTCCGCGGCATGTTCAACGACCGCAAGATGACGGTCCGGGAGGAGCACAAGGCCGTGGAGAGCG CGGTACGTCTTCCTTTCGCCCGCGCCCATCCTTCCGCCTCCTGAGAGCCTGTTTGCCTGACGCCACGACAGATCC AGAAGATCAACTACAAGATGAGCATCCTGCTCAGCAGCGACTGCAAGTCGGAGATTGAGGGCGTCCGCTGGATCC TGATCAGGCGGTCCGTGCTGGGCATCATCTTCATGGCCATCCTGACGCTCGGCATGCTGCGCTACGCCACCTACC TCGGACAGAAGAGGAAGCTGGAGGCGGAAAAGAAGAAGAAGGAGCGGGAGGAGCTGAGGAGGGACGGCGGCAAGA CGGACCACAGCGCGGCGGCGGACGCGGCCGCCATCCTGGCCGCCAATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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