Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4499
Gene name
LocationContig_229:19986..21102
Strand-
Gene length (bp)1116
Transcript length (bp)1116
Coding sequence length (bp)1116
Protein length (aa) 372

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03403 PAF-AH_p_II Platelet-activating factor acetylhydrolase, isoform II 2.7E-05 90 158

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4AZY1|A1751_ARTBC Probable 1-alkyl-2-acetylglycerophosphocholine esterase OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01751 PE=1 SV=1 1 370 3.0E-71

GO

GO Term Description Terminal node
GO:0016042 lipid catabolic process Yes
GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity Yes
GO:1901575 organic substance catabolic process No
GO:0006629 lipid metabolic process No
GO:0052689 carboxylic ester hydrolase activity No
GO:0071704 organic substance metabolic process No
GO:0008152 metabolic process No
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0008150 biological_process No
GO:0016787 hydrolase activity No
GO:0003674 molecular_function No
GO:0009056 catabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4499
MLLVGALTLLLPATARALVLPPPPSPYVIQWRSRELVDESRRDAFNSSHPRRLMVSIFSPVPALSCSRVCHVPYM
PPAIASVEDAVLDAYLGATSWPKSLLASLEMELCCQTRESHTVTTQAFPTLFLGTGLNTTRLLYSATAQHLASAG
YQVIVMDHPYETDVVQFPDGGLVFGGRVGRNPNDTAAIVHGLDVRTRDLSFVLDALRVPAAVYIGQSFGGAAAAA
AATSSSERRILGGVNLDGQLWGPVVRAGVCRPFLTIGAEGHTPASIPSWGAFFGAMDEKHPGVSAKLLNVQGTVH
GSFLDFSLIGDVAGLRARDGLEAFIGKATGLRVMEILKAYSAAFADYILRGADSVLLRGPSPSFPEVSFIR*
Coding >Hirsu2|4499
ATGCTGCTCGTCGGCGCCCTGACGCTTTTGCTCCCAGCAACGGCACGCGCCCTCGTTCTACCTCCTCCGCCGAGC
CCGTATGTGATCCAGTGGCGGTCTCGGGAGCTCGTCGACGAAAGCCGGCGAGATGCCTTCAACTCGTCTCATCCC
AGACGCTTGATGGTTTCCATATTCTCGCCCGTGCCCGCCCTCAGCTGCTCCAGAGTGTGCCATGTGCCGTACATG
CCACCGGCCATCGCCTCCGTCGAGGATGCCGTCCTCGATGCCTATCTCGGTGCGACCAGCTGGCCCAAGAGCCTG
CTCGCGAGCCTGGAGATGGAGCTCTGCTGCCAGACGCGTGAGAGTCACACCGTGACCACCCAAGCCTTTCCAACC
CTCTTTCTCGGCACGGGGCTGAACACCACACGCCTTCTCTACTCGGCCACTGCTCAGCATCTGGCCAGCGCCGGC
TATCAAGTCATTGTCATGGACCATCCATATGAGACGGATGTAGTTCAGTTCCCGGACGGCGGGCTCGTCTTTGGT
GGCCGCGTGGGCCGAAACCCCAACGACACCGCGGCAATCGTTCATGGTCTCGACGTCCGCACGCGGGATCTATCC
TTTGTCTTGGACGCCTTGCGCGTGCCAGCCGCCGTCTACATCGGCCAGTCGTTCGGCGGCGCCGCGGCGGCGGCT
GCCGCCACCTCATCCAGCGAGCGCCGTATCTTGGGCGGCGTCAATCTCGACGGCCAGCTCTGGGGACCCGTCGTG
CGCGCCGGCGTCTGCCGGCCCTTTCTCACCATCGGCGCCGAGGGCCACACCCCAGCTTCCATCCCGAGCTGGGGC
GCCTTCTTCGGCGCCATGGATGAGAAGCACCCCGGCGTGTCGGCCAAATTGCTCAACGTTCAGGGCACCGTCCAC
GGAAGTTTCCTCGACTTTTCCCTCATCGGCGACGTCGCCGGCCTGCGGGCGAGAGACGGTCTCGAGGCCTTCATC
GGCAAGGCCACGGGACTCAGGGTTATGGAAATACTGAAGGCATACTCGGCCGCCTTCGCCGACTATATCCTGCGC
GGCGCAGATTCGGTGCTTCTTCGCGGGCCGAGTCCGTCCTTCCCCGAGGTCTCGTTTATCAGGTAG
Transcript >Hirsu2|4499
ATGCTGCTCGTCGGCGCCCTGACGCTTTTGCTCCCAGCAACGGCACGCGCCCTCGTTCTACCTCCTCCGCCGAGC
CCGTATGTGATCCAGTGGCGGTCTCGGGAGCTCGTCGACGAAAGCCGGCGAGATGCCTTCAACTCGTCTCATCCC
AGACGCTTGATGGTTTCCATATTCTCGCCCGTGCCCGCCCTCAGCTGCTCCAGAGTGTGCCATGTGCCGTACATG
CCACCGGCCATCGCCTCCGTCGAGGATGCCGTCCTCGATGCCTATCTCGGTGCGACCAGCTGGCCCAAGAGCCTG
CTCGCGAGCCTGGAGATGGAGCTCTGCTGCCAGACGCGTGAGAGTCACACCGTGACCACCCAAGCCTTTCCAACC
CTCTTTCTCGGCACGGGGCTGAACACCACACGCCTTCTCTACTCGGCCACTGCTCAGCATCTGGCCAGCGCCGGC
TATCAAGTCATTGTCATGGACCATCCATATGAGACGGATGTAGTTCAGTTCCCGGACGGCGGGCTCGTCTTTGGT
GGCCGCGTGGGCCGAAACCCCAACGACACCGCGGCAATCGTTCATGGTCTCGACGTCCGCACGCGGGATCTATCC
TTTGTCTTGGACGCCTTGCGCGTGCCAGCCGCCGTCTACATCGGCCAGTCGTTCGGCGGCGCCGCGGCGGCGGCT
GCCGCCACCTCATCCAGCGAGCGCCGTATCTTGGGCGGCGTCAATCTCGACGGCCAGCTCTGGGGACCCGTCGTG
CGCGCCGGCGTCTGCCGGCCCTTTCTCACCATCGGCGCCGAGGGCCACACCCCAGCTTCCATCCCGAGCTGGGGC
GCCTTCTTCGGCGCCATGGATGAGAAGCACCCCGGCGTGTCGGCCAAATTGCTCAACGTTCAGGGCACCGTCCAC
GGAAGTTTCCTCGACTTTTCCCTCATCGGCGACGTCGCCGGCCTGCGGGCGAGAGACGGTCTCGAGGCCTTCATC
GGCAAGGCCACGGGACTCAGGGTTATGGAAATACTGAAGGCATACTCGGCCGCCTTCGCCGACTATATCCTGCGC
GGCGCAGATTCGGTGCTTCTTCGCGGGCCGAGTCCGTCCTTCCCCGAGGTCTCGTTTATCAGGTAG
Gene >Hirsu2|4499
ATGCTGCTCGTCGGCGCCCTGACGCTTTTGCTCCCAGCAACGGCACGCGCCCTCGTTCTACCTCCTCCGCCGAGC
CCGTATGTGATCCAGTGGCGGTCTCGGGAGCTCGTCGACGAAAGCCGGCGAGATGCCTTCAACTCGTCTCATCCC
AGACGCTTGATGGTTTCCATATTCTCGCCCGTGCCCGCCCTCAGCTGCTCCAGAGTGTGCCATGTGCCGTACATG
CCACCGGCCATCGCCTCCGTCGAGGATGCCGTCCTCGATGCCTATCTCGGTGCGACCAGCTGGCCCAAGAGCCTG
CTCGCGAGCCTGGAGATGGAGCTCTGCTGCCAGACGCGTGAGAGTCACACCGTGACCACCCAAGCCTTTCCAACC
CTCTTTCTCGGCACGGGGCTGAACACCACACGCCTTCTCTACTCGGCCACTGCTCAGCATCTGGCCAGCGCCGGC
TATCAAGTCATTGTCATGGACCATCCATATGAGACGGATGTAGTTCAGTTCCCGGACGGCGGGCTCGTCTTTGGT
GGCCGCGTGGGCCGAAACCCCAACGACACCGCGGCAATCGTTCATGGTCTCGACGTCCGCACGCGGGATCTATCC
TTTGTCTTGGACGCCTTGCGCGTGCCAGCCGCCGTCTACATCGGCCAGTCGTTCGGCGGCGCCGCGGCGGCGGCT
GCCGCCACCTCATCCAGCGAGCGCCGTATCTTGGGCGGCGTCAATCTCGACGGCCAGCTCTGGGGACCCGTCGTG
CGCGCCGGCGTCTGCCGGCCCTTTCTCACCATCGGCGCCGAGGGCCACACCCCAGCTTCCATCCCGAGCTGGGGC
GCCTTCTTCGGCGCCATGGATGAGAAGCACCCCGGCGTGTCGGCCAAATTGCTCAACGTTCAGGGCACCGTCCAC
GGAAGTTTCCTCGACTTTTCCCTCATCGGCGACGTCGCCGGCCTGCGGGCGAGAGACGGTCTCGAGGCCTTCATC
GGCAAGGCCACGGGACTCAGGGTTATGGAAATACTGAAGGCATACTCGGCCGCCTTCGCCGACTATATCCTGCGC
GGCGCAGATTCGGTGCTTCTTCGCGGGCCGAGTCCGTCCTTCCCCGAGGTCTCGTTTATCAGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail