Protein ID | Hirsu2|4496 |
Gene name | |
Location | Contig_229:9794..11132 |
Strand | + |
Gene length (bp) | 1338 |
Transcript length (bp) | 1338 |
Coding sequence length (bp) | 1338 |
Protein length (aa) | 446 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1466 | 0.0903 | 0.9553 | 0.099 | 0.0441 | 0.0147 | 0.1398 | 0.2175 | 0.1815 | 0.0062 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 21 | 0.999632 |
Orthofinder run ID | 4 |
Orthogroup | 121 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|4496 MRLGALFAILIATSVSGTALSGQILHPEEDEDAKAFVDKLQRNFVFNWDNAPWKREFLWDSSSSCGVWWSTWWTA CGTASFYQEYKLVEQYLPSREARNLVKSAPQYHVHSVPVEHAASDISNKGQRDLEVTTEESLVKIDSTSEGWNVG AQVFGGISAPYAGGPNGGISVSGGYSKDWTSGEYRTKGTKVTRHCPPGFHCTVQTWTYHVKFMGHCRVEPVIDCG GDRRICEDRWSDIRNSCPAWRPFRNERCNLWGNGAARFYYEPCEVQTPIITQVGEPMSRRVYIETELPSHRKSML DEDSRCGETPYYGEEQAPVATGEKSGSACKLNNGDWYDPEDRSYHSDGKWRCKSNVPKPVLDKCVHSEGRKTDQE TRQHEGGVARAKRATIEEPESELPRTSKMESLDEESGSDGLPAKIHGGTSDGGQLEMRVEFLDREPAGLS* |
Coding | >Hirsu2|4496 ATGAGACTCGGCGCTCTATTTGCCATCCTCATCGCCACGTCTGTTTCTGGCACGGCTCTTTCTGGCCAAATCTTG CACCCGGAAGAGGATGAGGATGCCAAGGCTTTCGTCGACAAGCTGCAACGCAACTTTGTCTTTAACTGGGACAAC GCTCCCTGGAAGAGGGAATTTCTTTGGGATTCGAGCAGCTCGTGTGGAGTGTGGTGGTCGACCTGGTGGACAGCG TGTGGCACCGCCTCGTTCTACCAGGAATACAAGCTGGTCGAGCAGTATTTGCCGAGTCGCGAAGCCAGGAATTTG GTCAAATCAGCGCCGCAGTACCACGTACACTCCGTACCCGTCGAACATGCGGCAAGCGACATCAGCAACAAAGGC CAGCGCGACTTGGAGGTCACCACGGAGGAATCTCTAGTCAAGATCGACAGTACCAGCGAAGGCTGGAACGTCGGG GCCCAGGTCTTTGGCGGTATCAGCGCTCCTTACGCGGGCGGGCCCAACGGCGGCATCAGCGTCTCGGGCGGCTAC TCCAAGGACTGGACTTCCGGGGAGTACAGGACGAAGGGAACCAAGGTGACGAGGCATTGCCCGCCCGGGTTCCAC TGCACCGTGCAGACGTGGACGTATCATGTCAAGTTCATGGGCCACTGCCGGGTCGAGCCCGTCATCGACTGCGGT GGCGACAGGCGGATTTGCGAGGACCGCTGGTCTGATATCAGGAACTCATGCCCGGCCTGGCGGCCGTTCCGCAAC GAGAGGTGCAACCTTTGGGGCAACGGTGCTGCGCGCTTCTACTACGAACCCTGCGAGGTCCAGACCCCGATTATC ACGCAAGTCGGAGAGCCCATGAGTCGGCGTGTCTATATTGAAACGGAGCTTCCGTCGCACCGAAAGAGCATGCTG GACGAGGATAGCCGCTGTGGGGAAACACCTTATTACGGCGAAGAACAGGCCCCGGTAGCTACGGGGGAGAAGTCC GGAAGCGCTTGCAAGCTGAACAATGGTGATTGGTACGATCCAGAGGATCGGAGCTACCACAGCGATGGCAAGTGG CGGTGCAAGTCGAACGTGCCGAAGCCGGTCCTCGACAAGTGTGTCCATAGCGAGGGCAGGAAGACGGACCAGGAA ACAAGACAGCACGAGGGCGGCGTTGCTAGGGCAAAGCGAGCGACGATTGAGGAGCCGGAATCGGAGCTACCGAGA ACGAGCAAGATGGAATCCCTAGATGAAGAGTCCGGATCGGACGGCTTGCCTGCAAAGATACACGGGGGGACCTCC GATGGTGGGCAGCTCGAGATGAGGGTAGAATTCTTGGATCGCGAGCCGGCCGGCCTGTCGTAG |
Transcript | >Hirsu2|4496 ATGAGACTCGGCGCTCTATTTGCCATCCTCATCGCCACGTCTGTTTCTGGCACGGCTCTTTCTGGCCAAATCTTG CACCCGGAAGAGGATGAGGATGCCAAGGCTTTCGTCGACAAGCTGCAACGCAACTTTGTCTTTAACTGGGACAAC GCTCCCTGGAAGAGGGAATTTCTTTGGGATTCGAGCAGCTCGTGTGGAGTGTGGTGGTCGACCTGGTGGACAGCG TGTGGCACCGCCTCGTTCTACCAGGAATACAAGCTGGTCGAGCAGTATTTGCCGAGTCGCGAAGCCAGGAATTTG GTCAAATCAGCGCCGCAGTACCACGTACACTCCGTACCCGTCGAACATGCGGCAAGCGACATCAGCAACAAAGGC CAGCGCGACTTGGAGGTCACCACGGAGGAATCTCTAGTCAAGATCGACAGTACCAGCGAAGGCTGGAACGTCGGG GCCCAGGTCTTTGGCGGTATCAGCGCTCCTTACGCGGGCGGGCCCAACGGCGGCATCAGCGTCTCGGGCGGCTAC TCCAAGGACTGGACTTCCGGGGAGTACAGGACGAAGGGAACCAAGGTGACGAGGCATTGCCCGCCCGGGTTCCAC TGCACCGTGCAGACGTGGACGTATCATGTCAAGTTCATGGGCCACTGCCGGGTCGAGCCCGTCATCGACTGCGGT GGCGACAGGCGGATTTGCGAGGACCGCTGGTCTGATATCAGGAACTCATGCCCGGCCTGGCGGCCGTTCCGCAAC GAGAGGTGCAACCTTTGGGGCAACGGTGCTGCGCGCTTCTACTACGAACCCTGCGAGGTCCAGACCCCGATTATC ACGCAAGTCGGAGAGCCCATGAGTCGGCGTGTCTATATTGAAACGGAGCTTCCGTCGCACCGAAAGAGCATGCTG GACGAGGATAGCCGCTGTGGGGAAACACCTTATTACGGCGAAGAACAGGCCCCGGTAGCTACGGGGGAGAAGTCC GGAAGCGCTTGCAAGCTGAACAATGGTGATTGGTACGATCCAGAGGATCGGAGCTACCACAGCGATGGCAAGTGG CGGTGCAAGTCGAACGTGCCGAAGCCGGTCCTCGACAAGTGTGTCCATAGCGAGGGCAGGAAGACGGACCAGGAA ACAAGACAGCACGAGGGCGGCGTTGCTAGGGCAAAGCGAGCGACGATTGAGGAGCCGGAATCGGAGCTACCGAGA ACGAGCAAGATGGAATCCCTAGATGAAGAGTCCGGATCGGACGGCTTGCCTGCAAAGATACACGGGGGGACCTCC GATGGTGGGCAGCTCGAGATGAGGGTAGAATTCTTGGATCGCGAGCCGGCCGGCCTGTCGTAG |
Gene | >Hirsu2|4496 ATGAGACTCGGCGCTCTATTTGCCATCCTCATCGCCACGTCTGTTTCTGGCACGGCTCTTTCTGGCCAAATCTTG CACCCGGAAGAGGATGAGGATGCCAAGGCTTTCGTCGACAAGCTGCAACGCAACTTTGTCTTTAACTGGGACAAC GCTCCCTGGAAGAGGGAATTTCTTTGGGATTCGAGCAGCTCGTGTGGAGTGTGGTGGTCGACCTGGTGGACAGCG TGTGGCACCGCCTCGTTCTACCAGGAATACAAGCTGGTCGAGCAGTATTTGCCGAGTCGCGAAGCCAGGAATTTG GTCAAATCAGCGCCGCAGTACCACGTACACTCCGTACCCGTCGAACATGCGGCAAGCGACATCAGCAACAAAGGC CAGCGCGACTTGGAGGTCACCACGGAGGAATCTCTAGTCAAGATCGACAGTACCAGCGAAGGCTGGAACGTCGGG GCCCAGGTCTTTGGCGGTATCAGCGCTCCTTACGCGGGCGGGCCCAACGGCGGCATCAGCGTCTCGGGCGGCTAC TCCAAGGACTGGACTTCCGGGGAGTACAGGACGAAGGGAACCAAGGTGACGAGGCATTGCCCGCCCGGGTTCCAC TGCACCGTGCAGACGTGGACGTATCATGTCAAGTTCATGGGCCACTGCCGGGTCGAGCCCGTCATCGACTGCGGT GGCGACAGGCGGATTTGCGAGGACCGCTGGTCTGATATCAGGAACTCATGCCCGGCCTGGCGGCCGTTCCGCAAC GAGAGGTGCAACCTTTGGGGCAACGGTGCTGCGCGCTTCTACTACGAACCCTGCGAGGTCCAGACCCCGATTATC ACGCAAGTCGGAGAGCCCATGAGTCGGCGTGTCTATATTGAAACGGAGCTTCCGTCGCACCGAAAGAGCATGCTG GACGAGGATAGCCGCTGTGGGGAAACACCTTATTACGGCGAAGAACAGGCCCCGGTAGCTACGGGGGAGAAGTCC GGAAGCGCTTGCAAGCTGAACAATGGTGATTGGTACGATCCAGAGGATCGGAGCTACCACAGCGATGGCAAGTGG CGGTGCAAGTCGAACGTGCCGAAGCCGGTCCTCGACAAGTGTGTCCATAGCGAGGGCAGGAAGACGGACCAGGAA ACAAGACAGCACGAGGGCGGCGTTGCTAGGGCAAAGCGAGCGACGATTGAGGAGCCGGAATCGGAGCTACCGAGA ACGAGCAAGATGGAATCCCTAGATGAAGAGTCCGGATCGGACGGCTTGCCTGCAAAGATACACGGGGGGACCTCC GATGGTGGGCAGCTCGAGATGAGGGTAGAATTCTTGGATCGCGAGCCGGCCGGCCTGTCGTAG |