© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4495 |
| Gene name | |
| Location | Contig_229:5980..8059 |
| Strand | + |
| Gene length (bp) | 2079 |
| Transcript length (bp) | 1032 |
| Coding sequence length (bp) | 1032 |
| Protein length (aa) | 344 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.2698 | 0.088 | 0.9324 | 0.0893 | 0.1471 | 0.0754 | 0.2472 | 0.1605 | 0.1945 | 0.0116 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 15 | 0.999318 |
| Orthofinder run ID | 4 |
| Orthogroup | 6639 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4495 MRVPTLASLASLALAAKYQEVMPAAKSINAVPARWDGKCFYPEPDIAFQLSSYVGRWYQFPGQPTPECPGPNYIV QDYTGDIAIVQTSNFKTLFILSRERHLKDSVIEAWIKRAGQLGSNLAEIGLTGLRIPEGGFLLGNSGVPTHTGAS SYIGLSGLDLSWGGFLLGKSGAALAPGPISSYTWLSGLGLPEKLFVLESSGAACLPGPISSYTWLSGPGFPEKLF SRDSAGAAFVPGPISSCTWLTGLSFPYNLFSRDGPGAACVPGPLSSPPGAEPLHLSGAALFWKLVAGFATFGRDA ASKRSEATGTTASTWEAAASAAASASPFLERDYARPTAGGRQK* |
| Coding | >Hirsu2|4495 ATGCGCGTCCCAACTCTCGCCAGTCTCGCCAGCCTGGCCCTCGCGGCCAAATACCAAGAGGTAATGCCGGCGGCA AAGTCCATCAATGCGGTTCCCGCGAGATGGGACGGCAAGTGCTTCTACCCAGAGCCGGACATCGCCTTTCAGCTC AGCTCGTACGTCGGCCGCTGGTACCAGTTCCCTGGACAGCCGACCCCAGAATGCCCAGGCCCAAACTACATTGTT CAAGATTACACGGGAGATATCGCCATTGTGCAAACTAGCAACTTTAAGACGCTCTTCATCCTGAGCAGAGAGCGG CACCTCAAAGACTCCGTCATAGAGGCCTGGATCAAGCGTGCAGGGCAGCTGGGCTCGAACCTGGCCGAGATAGGG CTGACTGGTCTTCGCATCCCGGAGGGGGGGTTTCTTCTTGGAAACTCTGGTGTACCCACCCATACAGGTGCCTCC TCGTATATAGGGCTCTCTGGCCTCGATCTGTCGTGGGGGGGGTTTCTTCTTGGTAAATCTGGTGCGGCCCTTGCG CCAGGCCCTATCTCTTCGTATACATGGCTCTCCGGTCTCGGCCTTCCGGAGAAGCTGTTTGTTCTCGAGAGCTCT GGTGCCGCCTGTCTGCCTGGCCCTATCTCCTCGTACACGTGGCTCTCTGGCCCCGGCTTTCCGGAGAAGCTATTT TCTCGCGACAGCGCTGGTGCAGCCTTTGTGCCTGGGCCGATCTCCTCGTGCACGTGGCTTACTGGCCTCAGCTTT CCGTATAATCTATTTTCTCGCGATGGCCCTGGTGCTGCCTGTGTGCCTGGACCTCTCTCCTCACCTCCCGGCGCA GAGCCGCTCCACTTATCGGGGGCAGCTTTATTCTGGAAGCTGGTAGCAGGCTTCGCGACGTTTGGAAGAGATGCT GCCTCCAAGCGGAGTGAAGCCACTGGCACCACTGCGTCCACTTGGGAGGCCGCCGCCTCTGCCGCCGCCTCTGCC AGTCCTTTTCTCGAGCGGGATTACGCCCGCCCGACAGCAGGAGGGCGACAGAAGTAG |
| Transcript | >Hirsu2|4495 ATGCGCGTCCCAACTCTCGCCAGTCTCGCCAGCCTGGCCCTCGCGGCCAAATACCAAGAGGTAATGCCGGCGGCA AAGTCCATCAATGCGGTTCCCGCGAGATGGGACGGCAAGTGCTTCTACCCAGAGCCGGACATCGCCTTTCAGCTC AGCTCGTACGTCGGCCGCTGGTACCAGTTCCCTGGACAGCCGACCCCAGAATGCCCAGGCCCAAACTACATTGTT CAAGATTACACGGGAGATATCGCCATTGTGCAAACTAGCAACTTTAAGACGCTCTTCATCCTGAGCAGAGAGCGG CACCTCAAAGACTCCGTCATAGAGGCCTGGATCAAGCGTGCAGGGCAGCTGGGCTCGAACCTGGCCGAGATAGGG CTGACTGGTCTTCGCATCCCGGAGGGGGGGTTTCTTCTTGGAAACTCTGGTGTACCCACCCATACAGGTGCCTCC TCGTATATAGGGCTCTCTGGCCTCGATCTGTCGTGGGGGGGGTTTCTTCTTGGTAAATCTGGTGCGGCCCTTGCG CCAGGCCCTATCTCTTCGTATACATGGCTCTCCGGTCTCGGCCTTCCGGAGAAGCTGTTTGTTCTCGAGAGCTCT GGTGCCGCCTGTCTGCCTGGCCCTATCTCCTCGTACACGTGGCTCTCTGGCCCCGGCTTTCCGGAGAAGCTATTT TCTCGCGACAGCGCTGGTGCAGCCTTTGTGCCTGGGCCGATCTCCTCGTGCACGTGGCTTACTGGCCTCAGCTTT CCGTATAATCTATTTTCTCGCGATGGCCCTGGTGCTGCCTGTGTGCCTGGACCTCTCTCCTCACCTCCCGGCGCA GAGCCGCTCCACTTATCGGGGGCAGCTTTATTCTGGAAGCTGGTAGCAGGCTTCGCGACGTTTGGAAGAGATGCT GCCTCCAAGCGGAGTGAAGCCACTGGCACCACTGCGTCCACTTGGGAGGCCGCCGCCTCTGCCGCCGCCTCTGCC AGTCCTTTTCTCGAGCGGGATTACGCCCGCCCGACAGCAGGAGGGCGACAGAAGTAG |
| Gene | >Hirsu2|4495 ATGCGCGTCCCAACTCTCGCCAGTCTCGCCAGCCTGGCCCTCGCGGCCAAATACCAAGAGGTAATGCCGGCGGCA AAGTCCATCAATGCGGTTCCCGCGAGATGGGACGGCAAGTGCTTCTACCCAGAGCCGGACATCGCCTTTCAGCTC AGCTCGTACGTCGGCCGCTGGTACCAGGTATTTTTTGCTCAGAAACAGGCAGCGCCTTGAATCCCATCTCATACT TCTGCTTCAGGTCGCCGGGACTTTGGCCCCGTTCACGGCGGGATGCAAATGCATCCACGCCGATTACAAGCTGAA TGTGAGGTTCTCGCGTGATGGGGCACGCCGCCTTGGCTGACAACTGGCCAAGACCGACGGGACCATTCGGGTCAA CAACTCCTGTGAGATAAATGGCAGAGCCCGGAACATAATCGGGACTGCATCGCTTGCAGCCTCGACTTATGGTGT GAGCGGAGCCTACCACGTGCAGTTCCCTGGACAGCCGACCCCAGAATGCCCAGGCCCAAACTACATTGTTCAAGG TCAGTCTCGGACCTGATCTTTAACCTCTATGTTAGCTGGCCACTAACACTGTCGCAAGATTACACGGGAGATATC GCCATTGTGCAAACTAGCAACTTTAAGACGCTCTTCATCCTGAGCAGAGAGCGGCACCTCAAAGACTCCGTCATA GAGGTGAGTTTTCCACACTCCCACGGAATCCAACGCTGCATACTAACTCGAGTCTAGGCCTGGATCAAGCGTGCA GGGCAGCTGGGCTCGAACCTGGCCGAGGTGAGAAAGACGGATCAATCAAAGTGCTCGTTTAAATAGCTACGATGA TGGATCTTGCGTATGGCATACTAGCACTGGGAACGAGGACATTTGCCTCTATTTAGGTGACTGGAACGAGTCTAA CAGTGCCATCCCTTCTCACTGCCATGAAGTGTAGTCTAGTGCTCCACTGTACCAGACCCCATCTCCACGTGTATC GGGCTTTCTGGCCTCGGCTCCCCGTAGAAGCTGTTTGTCCTTGACAGCTCTGGTGCTGCCCTCGTGCCTGGCCCT ATCTCCGCGTAGATAGGGCTGACTGGTCTCCGCGTCCCTGAGAGGGGGTTTCTTCTTGGTAACTCTGGTGTCCCC ACCCATACAGGTGCCTCCTCGTATATCGGGCTCTCTGGCCTCGACCTGTCGTTGAGGCTGTTTGTCCTTGATATC TGTGTTGCGGCCCTCGTTCTAGGACCTATCTCCGCGTAGATAGGGCTGACTGGTCTTCGCATCCCGGAGGGGGGG TTTCTTCTTGGAAACTCTGGTGTACCCACCCATACAGGTGCCTCCTCGTATATAGGGCTCTCTGGCCTCGATCTG TCGTGGGGGGGGTTTCTTCTTGGTAAATCTGGTGCGGCCCTTGCGCCAGGCCCTATCTCTTCGTATACATGGCTC TCCGGTCTCGGCCTTCCGGAGAAGCTGTTTGTTCTCGAGAGCTCTGGTGCCGCCTGTCTGCCTGGCCCTATCTCC TCGTACACGTGGCTCTCTGGCCCCGGCTTTCCGGAGAAGCTATTTTCTCGCGACAGCGCTGGTGCAGCCTTTGTG CCTGGGCCGATCTCCTCGTGCACGTGGCTTACTGGCCTCAGCTTTCCGTATAATCTATTTTCTCGCGATGGCCCT GGTGCTGCCTGTGTGCCTGGACCTCTCTCCTCGTACACGTGGCCCTCTGGCTTTTTATTCTTTCTGCGGATGCCA TTTTGTCTAGACAGCGCGGGGTCCGGCTTCTCGTGAAAGACCTTATCAGTCTTCATGTTTTCGCGGCTGTGTTGA CCTAGAACTTCAGGAGTAACATCTTTGCGGCCTGCTGTGCCTGGGATATGCCTGTTTAGACCTCCCGGCGCAGAG CCGCTCCACTTATCGGGGGCAGCTTTATTCTGGAAGCTGGTAGCAGGCTTCGCGACGTTTGGAAGAGATGCTGCC TCCAAGCGGAGTGAAGCCACTGGCACCACTGCGTCCACTTGGGAGGCCGCCGCCTCTGCCGCCGCCTCTGCCAGT CCTTTTCTCGAGCGGGATTACGCCCGCCCGACAGCAGGAGGGCGACAGAAGTAG |