Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4484
Gene name
LocationContig_2283:1319..2292
Strand+
Gene length (bp)973
Transcript length (bp)816
Coding sequence length (bp)816
Protein length (aa) 272

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06229 FRG1 FRG1-like domain 1.1E-46 89 270

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9P7X3|FRG1_SCHPO Protein frg1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=frg1 PE=3 SV=1 40 270 1.0E-18

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 40 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4484
MVKPLTFKGDKKAKKRKRARGGGGDDDDEARRQQLSLTDEAAAEAHEDDSWVSAEAVADVVGPVMIVLPTDAPAA
LACDAGGAVFALPIDNVVGGDPATAEPHDVRQVWVANRVAGTESFRFKGHHGRYLACDRIGQLSAKSEAVSPLES
FNVIATADTPGTFQLQTQRDTLLTVKPAARPSATAEVRGDADAISFNTTLRIRMQARFKPRLKASEEQRALAKIS
RRELEEAAGRKLSEDEIRLLKRARREGDYHEKMLDIKVKGKHDKFA*
Coding >Hirsu2|4484
ATGGTCAAGCCGCTGACCTTCAAGGGCGACAAGAAGGCCAAGAAGCGGAAGCGCGCTCGCGGCGGCGGCGGCGAC
GACGACGACGAGGCACGCCGGCAGCAGCTGTCGCTCACGGACGAGGCGGCGGCGGAGGCGCATGAGGACGACAGC
TGGGTGTCGGCGGAGGCGGTGGCGGACGTGGTCGGGCCCGTCATGATCGTGCTGCCGACGGACGCGCCGGCGGCG
CTGGCCTGTGACGCTGGCGGCGCCGTCTTTGCCCTGCCGATCGACAACGTCGTCGGCGGCGACCCGGCGACGGCC
GAGCCGCACGACGTGCGCCAGGTCTGGGTCGCCAACCGCGTCGCCGGCACCGAGAGCTTCCGCTTCAAGGGCCAC
CACGGGAGATACCTGGCCTGCGACAGGATCGGGCAGCTGTCGGCCAAGTCGGAGGCCGTCTCGCCGCTCGAGAGC
TTCAACGTCATCGCCACGGCCGACACGCCCGGCACGTTCCAGCTGCAGACGCAGCGCGACACCCTACTGACAGTC
AAGCCGGCGGCGCGGCCGTCGGCCACGGCCGAGGTCCGCGGCGACGCCGACGCCATCTCCTTCAACACCACGCTC
CGCATCCGCATGCAGGCCCGCTTCAAGCCGCGCCTCAAGGCGTCGGAGGAGCAGCGCGCGCTGGCCAAGATCAGC
CGCCGCGAGCTCGAGGAGGCCGCCGGCCGCAAGCTGTCCGAGGACGAGATCCGACTGCTCAAGCGCGCCCGCCGC
GAGGGCGACTACCACGAGAAGATGCTCGACATCAAGGTCAAGGGCAAGCACGACAAGTTTGCCTGA
Transcript >Hirsu2|4484
ATGGTCAAGCCGCTGACCTTCAAGGGCGACAAGAAGGCCAAGAAGCGGAAGCGCGCTCGCGGCGGCGGCGGCGAC
GACGACGACGAGGCACGCCGGCAGCAGCTGTCGCTCACGGACGAGGCGGCGGCGGAGGCGCATGAGGACGACAGC
TGGGTGTCGGCGGAGGCGGTGGCGGACGTGGTCGGGCCCGTCATGATCGTGCTGCCGACGGACGCGCCGGCGGCG
CTGGCCTGTGACGCTGGCGGCGCCGTCTTTGCCCTGCCGATCGACAACGTCGTCGGCGGCGACCCGGCGACGGCC
GAGCCGCACGACGTGCGCCAGGTCTGGGTCGCCAACCGCGTCGCCGGCACCGAGAGCTTCCGCTTCAAGGGCCAC
CACGGGAGATACCTGGCCTGCGACAGGATCGGGCAGCTGTCGGCCAAGTCGGAGGCCGTCTCGCCGCTCGAGAGC
TTCAACGTCATCGCCACGGCCGACACGCCCGGCACGTTCCAGCTGCAGACGCAGCGCGACACCCTACTGACAGTC
AAGCCGGCGGCGCGGCCGTCGGCCACGGCCGAGGTCCGCGGCGACGCCGACGCCATCTCCTTCAACACCACGCTC
CGCATCCGCATGCAGGCCCGCTTCAAGCCGCGCCTCAAGGCGTCGGAGGAGCAGCGCGCGCTGGCCAAGATCAGC
CGCCGCGAGCTCGAGGAGGCCGCCGGCCGCAAGCTGTCCGAGGACGAGATCCGACTGCTCAAGCGCGCCCGCCGC
GAGGGCGACTACCACGAGAAGATGCTCGACATCAAGGTCAAGGGCAAGCACGACAAGTTTGCCTGA
Gene >Hirsu2|4484
ATGGTCAAGCCGCTGACCTTCAAGGGCGACAAGAAGGCCAAGAAGCGGAAGCGCGCTCGCGGCGGCGGCGGCGAC
GACGACGACGAGGCACGCCGGCAGCAGCTGTCGCTCACGGACGAGGCGGCGGCGGAGGCGCATGAGGACGACAGC
TGGGTGTCGGCGGAGGCGGTGGCGGACGTGGTCGGGCCCGTCATGATCGTGCTGCCGACGGACGCGCCGGCGGCG
CTGGCCTGTGACGCTGGCGGCGCCGTCTTTGCCCTGCCGATCGACAACGTCGTCGGCGGCGACCCGGCGACGGCC
GAGCCGCACGACGTGCGCCAGGTCTGGGTCGCCAACCGCGTCGCCGGCACCGAGAGCTTCCGCTTCAAGGGCCAC
CACGGGAGGTAAGGCGCGACAAGACAGACACGTTTCACGGAGAGAACGAAAGAGAGAGAGGCAAATCAAGTGACA
GAGAGAGAGAGAGAGAGAGACGCACAAGGAGAGAGGCATAGGAAGAGAGAGAGAGAGACGCAGGCTGACTCGCAC
ATCCCCCACTCCCAGATACCTGGCCTGCGACAGGATCGGGCAGCTGTCGGCCAAGTCGGAGGCCGTCTCGCCGCT
CGAGAGCTTCAACGTCATCGCCACGGCCGACACGCCCGGCACGTTCCAGCTGCAGACGCAGCGCGACACCCTACT
GACAGTCAAGCCGGCGGCGCGGCCGTCGGCCACGGCCGAGGTCCGCGGCGACGCCGACGCCATCTCCTTCAACAC
CACGCTCCGCATCCGCATGCAGGCCCGCTTCAAGCCGCGCCTCAAGGCGTCGGAGGAGCAGCGCGCGCTGGCCAA
GATCAGCCGCCGCGAGCTCGAGGAGGCCGCCGGCCGCAAGCTGTCCGAGGACGAGATCCGACTGCTCAAGCGCGC
CCGCCGCGAGGGCGACTACCACGAGAAGATGCTCGACATCAAGGTCAAGGGCAAGCACGACAAGTTTGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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