Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4479
Gene name
LocationContig_228:26322..27789
Strand-
Gene length (bp)1467
Transcript length (bp)1377
Coding sequence length (bp)1377
Protein length (aa) 459

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 31 0.45

Transmembrane Domains

Domain # Start End Length
1 111 133 22
2 356 378 22
3 393 412 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4479
MDGLEALAWSSLDEFQEFCDQRAGGAGRSYDALRVREPAAAVDKARLDEEQLGGFFAPARREFRLVHIKRQAHSN
VLDIGRASFTRVFRASGCSPCALDLIAQDYDGFHHFAGPGAGCCYYIGTAWYALVWTFRPDDGSTNAVFIHRRGD
RTYQGFVRILDTYARYLLTPESLIFVSVLHQIRLSDLETAEREAITIRQIENATGYRWNPERSAAAAVSGSWGGP
QFQIADVAHWSQKVGEILGHVSNKIRHQNLALSLLAHLAREFAARLERPADDDDDGQTGRVEDLCEAIPVLERKV
RAYEGYLLFLQDRSRNLSSVLFAILTHKDAVAGMQLAQTSHELAETARRDTSSMKTLAVMTMAFLPGTFFATLFA
LPFFKWEQPAVVQDSFRVYLAFTVPSTAVIFLVWLAVTNRSLLTRWLGRNCVREPVGPHAQDAACRGDAGKERVE
PRGRYSLA*
Coding >Hirsu2|4479
ATGGACGGCCTCGAAGCGCTCGCCTGGTCGTCGCTGGACGAGTTCCAGGAGTTCTGCGACCAGCGGGCGGGCGGC
GCGGGGCGGTCGTACGACGCGCTGCGGGTGCGCGAGCCGGCGGCGGCAGTCGACAAGGCGCGGCTGGACGAGGAG
CAGCTGGGCGGCTTCTTCGCGCCGGCGCGGCGAGAGTTCCGGCTCGTGCACATCAAGCGCCAGGCGCACTCCAAC
GTGCTGGACATCGGGCGGGCCTCGTTCACGCGCGTCTTCCGCGCGTCGGGCTGCAGCCCCTGCGCGCTCGACCTG
ATCGCGCAGGACTACGACGGCTTCCACCACTTCGCCGGCCCCGGCGCCGGCTGCTGCTACTACATCGGCACGGCC
TGGTACGCGCTGGTGTGGACGTTCCGGCCCGACGACGGCAGCACCAACGCCGTCTTCATCCACCGCCGCGGCGAC
CGCACCTACCAGGGCTTCGTCCGCATCCTCGACACCTACGCTCGCTACCTGCTCACGCCCGAGTCGCTCATCTTC
GTCTCCGTCCTGCACCAGATCCGCCTGTCGGACCTGGAGACGGCCGAGCGCGAGGCCATCACCATCCGCCAGATC
GAGAACGCGACCGGCTACCGCTGGAACCCCGAGCGCTCCGCCGCCGCCGCCGTCTCCGGCTCCTGGGGCGGCCCG
CAGTTCCAGATCGCAGACGTCGCCCACTGGTCGCAGAAGGTGGGCGAGATCCTCGGCCACGTCTCCAACAAGATC
CGCCACCAGAACCTGGCCCTGTCGCTGCTGGCCCACCTCGCGCGCGAGTTCGCCGCCCGCCTCGAGCGGCCCGCC
GACGACGACGACGACGGCCAGACGGGGCGCGTCGAGGACCTCTGCGAGGCCATCCCCGTGCTGGAGCGCAAGGTG
CGCGCCTACGAGGGCTACCTCCTCTTCCTCCAGGACCGGTCGAGAAACCTCTCCTCCGTCCTCTTCGCCATCCTC
ACCCACAAGGACGCCGTGGCCGGCATGCAGCTCGCCCAGACGAGCCACGAGCTGGCCGAGACGGCCCGGCGCGAC
ACGTCGTCGATGAAGACGCTGGCCGTCATGACCATGGCCTTCCTGCCCGGCACCTTCTTCGCCACCCTCTTCGCC
CTGCCCTTCTTCAAGTGGGAGCAGCCGGCCGTGGTCCAGGACAGCTTCCGCGTCTACCTCGCCTTCACCGTCCCC
TCCACGGCCGTCATCTTCCTCGTCTGGCTGGCCGTCACGAACCGGTCCCTGCTCACGCGCTGGCTCGGCCGGAAT
TGCGTCCGAGAGCCGGTCGGCCCGCACGCCCAAGACGCCGCCTGCCGCGGCGACGCCGGTAAAGAACGCGTCGAG
CCGCGAGGCCGATACTCTCTCGCCTGA
Transcript >Hirsu2|4479
ATGGACGGCCTCGAAGCGCTCGCCTGGTCGTCGCTGGACGAGTTCCAGGAGTTCTGCGACCAGCGGGCGGGCGGC
GCGGGGCGGTCGTACGACGCGCTGCGGGTGCGCGAGCCGGCGGCGGCAGTCGACAAGGCGCGGCTGGACGAGGAG
CAGCTGGGCGGCTTCTTCGCGCCGGCGCGGCGAGAGTTCCGGCTCGTGCACATCAAGCGCCAGGCGCACTCCAAC
GTGCTGGACATCGGGCGGGCCTCGTTCACGCGCGTCTTCCGCGCGTCGGGCTGCAGCCCCTGCGCGCTCGACCTG
ATCGCGCAGGACTACGACGGCTTCCACCACTTCGCCGGCCCCGGCGCCGGCTGCTGCTACTACATCGGCACGGCC
TGGTACGCGCTGGTGTGGACGTTCCGGCCCGACGACGGCAGCACCAACGCCGTCTTCATCCACCGCCGCGGCGAC
CGCACCTACCAGGGCTTCGTCCGCATCCTCGACACCTACGCTCGCTACCTGCTCACGCCCGAGTCGCTCATCTTC
GTCTCCGTCCTGCACCAGATCCGCCTGTCGGACCTGGAGACGGCCGAGCGCGAGGCCATCACCATCCGCCAGATC
GAGAACGCGACCGGCTACCGCTGGAACCCCGAGCGCTCCGCCGCCGCCGCCGTCTCCGGCTCCTGGGGCGGCCCG
CAGTTCCAGATCGCAGACGTCGCCCACTGGTCGCAGAAGGTGGGCGAGATCCTCGGCCACGTCTCCAACAAGATC
CGCCACCAGAACCTGGCCCTGTCGCTGCTGGCCCACCTCGCGCGCGAGTTCGCCGCCCGCCTCGAGCGGCCCGCC
GACGACGACGACGACGGCCAGACGGGGCGCGTCGAGGACCTCTGCGAGGCCATCCCCGTGCTGGAGCGCAAGGTG
CGCGCCTACGAGGGCTACCTCCTCTTCCTCCAGGACCGGTCGAGAAACCTCTCCTCCGTCCTCTTCGCCATCCTC
ACCCACAAGGACGCCGTGGCCGGCATGCAGCTCGCCCAGACGAGCCACGAGCTGGCCGAGACGGCCCGGCGCGAC
ACGTCGTCGATGAAGACGCTGGCCGTCATGACCATGGCCTTCCTGCCCGGCACCTTCTTCGCCACCCTCTTCGCC
CTGCCCTTCTTCAAGTGGGAGCAGCCGGCCGTGGTCCAGGACAGCTTCCGCGTCTACCTCGCCTTCACCGTCCCC
TCCACGGCCGTCATCTTCCTCGTCTGGCTGGCCGTCACGAACCGGTCCCTGCTCACGCGCTGGCTCGGCCGGAAT
TGCGTCCGAGAGCCGGTCGGCCCGCACGCCCAAGACGCCGCCTGCCGCGGCGACGCCGGTAAAGAACGCGTCGAG
CCGCGAGGCCGATACTCTCTCGCCTGA
Gene >Hirsu2|4479
ATGGACGGCCTCGAAGCGCTCGCCTGGTCGTCGCTGGACGAGTTCCAGGAGTTCTGCGACCAGCGGGCGGGCGGC
GCGGGGCGGTCGTACGACGCGCTGCGGGTGCGCGAGCCGGCGGCGGCAGTCGACAAGGCGCGGCTGGACGAGGAG
CAGCTGGGCGGCTTCTTCGCGCCGGCGCGGCGAGAGTTCCGGCTCGTGCACATCAAGCGCCAGGCGCACTCCAAC
GTGCTGGACATCGGGCGGGCCTCGTTCACGCGCGTCTTCCGCGCGTCGGGCTGCAGCCCCTGCGCGCTCGACCTG
ATCGCGCAGGACTACGACGGCTTCCACCACTTCGCCGGCCCCGGCGCCGGCTGCTGCTACTACATCGGCACGGCC
TGGTACGCGCTGGTGTGGACGTTCCGGCCCGACGACGGCAGCACCAACGCCGTCTTCATCCACCGCCGCGGCGAC
CGCACCTACCAGGGCTTCGTCCGCATCCTCGACACCTACGCTCGCTACCTGCTCACGCCCGAGTCGCTCATCTTC
GTCTCCGTCCTGCACCAGATCCGCCTGTCGGACCTGGAGACGGCCGAGCGCGAGGCCATCACCATCCGCCAGATC
GAGAACGCGACCGGCTACCGCTGGAACCCCGAGCGCTCCGCCGCCGCCGCCGTCTCCGGCTCCTGGGGCGGCCCG
CAGTTCCAGATCGCAGACGTCGCCCACTGGTCGCAGAAGGTGGGCGAGATCCTCGGCCACGTCTCCAACAAGATC
CGCCACCAGAACCTGGCCCTGTCGCTGCTGGCCCACCTCGCGCGCGAGTTCGCCGCCCGCCTCGAGCGGCCCGCC
GACGACGACGACGACGGCCAGACGGGGCGCGTCGAGGACCTCTGCGAGGCCATCCCCGTGCTGGAGCGCAAGGTG
CGCGCCTACGAGGGCTACCTCCTCTTCCTCCAGGACCGGTCGAGAAACCTCTCCTCCGTCGTACGTGGAAAAAAA
AATTTGTTTCTCGGGCCCTTGTTTCGTGTTTGGTCATGGTTTCCGTGGCCGGCTCTGACTTTGTTCCGTCTTCAG
CTCTTCGCCATCCTCACCCACAAGGACGCCGTGGCCGGCATGCAGCTCGCCCAGACGAGCCACGAGCTGGCCGAG
ACGGCCCGGCGCGACACGTCGTCGATGAAGACGCTGGCCGTCATGACCATGGCCTTCCTGCCCGGCACCTTCTTC
GCCACCCTCTTCGCCCTGCCCTTCTTCAAGTGGGAGCAGCCGGCCGTGGTCCAGGACAGCTTCCGCGTCTACCTC
GCCTTCACCGTCCCCTCCACGGCCGTCATCTTCCTCGTCTGGCTGGCCGTCACGAACCGGTCCCTGCTCACGCGC
TGGCTCGGCCGGAATTGCGTCCGAGAGCCGGTCGGCCCGCACGCCCAAGACGCCGCCTGCCGCGGCGACGCCGGT
AAAGAACGCGTCGAGCCGCGAGGCCGATACTCTCTCGCCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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