© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4476 |
| Gene name | |
| Location | Contig_228:13881..15980 |
| Strand | + |
| Gene length (bp) | 2099 |
| Transcript length (bp) | 1839 |
| Coding sequence length (bp) | 1839 |
| Protein length (aa) | 613 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 1.3E-143 | 106 | 569 |
| PF13520 | AA_permease_2 | Amino acid permease | 6.2E-38 | 110 | 532 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P19145|GAP1_YEAST | General amino-acid permease GAP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAP1 PE=1 SV=2 | 1 | 612 | 4.0E-179 |
| sp|Q9P768|YI26_SCHPO | Uncharacterized amino-acid permease P7G5.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAP7G5.06 PE=3 SV=1 | 98 | 612 | 2.0E-168 |
| sp|P34054|INDA1_HYPAT | Amino-acid permease inda1 OS=Hypocrea atroviridis GN=inda1 PE=2 SV=1 | 98 | 607 | 6.0E-168 |
| sp|Q9URZ4|CAT1_SCHPO | Cationic amino acid transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cat1 PE=1 SV=3 | 75 | 612 | 1.0E-164 |
| sp|Q9P5N4|YH81_SCHPO | Uncharacterized amino-acid permease C359.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC359.01 PE=3 SV=2 | 75 | 612 | 3.0E-164 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P19145|GAP1_YEAST | General amino-acid permease GAP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAP1 PE=1 SV=2 | 1 | 612 | 4.0E-179 |
| sp|Q9P768|YI26_SCHPO | Uncharacterized amino-acid permease P7G5.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAP7G5.06 PE=3 SV=1 | 98 | 612 | 2.0E-168 |
| sp|P34054|INDA1_HYPAT | Amino-acid permease inda1 OS=Hypocrea atroviridis GN=inda1 PE=2 SV=1 | 98 | 607 | 6.0E-168 |
| sp|Q9URZ4|CAT1_SCHPO | Cationic amino acid transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cat1 PE=1 SV=3 | 75 | 612 | 1.0E-164 |
| sp|Q9P5N4|YH81_SCHPO | Uncharacterized amino-acid permease C359.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC359.01 PE=3 SV=2 | 75 | 612 | 3.0E-164 |
| sp|O60170|MEU22_SCHPO | Probable amino-acid permease meu22 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=meu22 PE=2 SV=1 | 46 | 581 | 6.0E-163 |
| sp|P06775|HIP1_YEAST | Histidine permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HIP1 PE=1 SV=2 | 49 | 589 | 8.0E-158 |
| sp|Q9P5N2|AAT1_SCHPO | Amino acid transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=aat1 PE=3 SV=1 | 98 | 612 | 3.0E-157 |
| sp|B5BP45|YP51_SCHPO | Uncharacterized amino-acid permease C460.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.01c PE=3 SV=1 | 83 | 612 | 1.0E-156 |
| sp|P38967|TAT2_YEAST | Tryptophan permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAT2 PE=1 SV=1 | 96 | 612 | 9.0E-151 |
| sp|P25376|AGP1_YEAST | General amino acid permease AGP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AGP1 PE=1 SV=3 | 35 | 612 | 2.0E-146 |
| sp|A6ZTG5|AGP1_YEAS7 | General amino acid permease AGP1 OS=Saccharomyces cerevisiae (strain YJM789) GN=AGP1 PE=3 SV=1 | 35 | 612 | 3.0E-146 |
| sp|Q876K6|AGP1_SACU7 | General amino acid permease AGP1 OS=Saccharomyces uvarum (strain ATCC 76518 / CBS 7001 / CLIB 283 / NBRC 10550 / MCYC 623 / NCYC 2669 / NRRL Y-11845) GN=AGP1 PE=3 SV=1 | 18 | 612 | 1.0E-145 |
| sp|Q9HDV2|YHE1_SCHPO | Uncharacterized amino-acid permease PB2B2.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB2B2.01 PE=3 SV=1 | 92 | 612 | 1.0E-142 |
| sp|P48813|GNP1_YEAST | High-affinity glutamine permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GNP1 PE=1 SV=2 | 1 | 612 | 1.0E-141 |
| sp|P38084|BAP2_YEAST | Leu/Val/Ile amino-acid permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BAP2 PE=1 SV=2 | 13 | 612 | 3.0E-140 |
| sp|P41815|BAP3_YEAST | Valine amino-acid permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BAP3 PE=1 SV=2 | 94 | 612 | 4.0E-131 |
| sp|P38085|TAT1_YEAST | Valine/tyrosine/tryptophan amino-acid permease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAT1 PE=1 SV=1 | 27 | 595 | 1.0E-130 |
| sp|P40901|ISP5_SCHPO | Sexual differentiation process putative amino-acid permease isp5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp5 PE=2 SV=2 | 98 | 586 | 6.0E-128 |
| sp|Q12372|MMP1_YEAST | S-methylmethionine permease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MMP1 PE=1 SV=1 | 94 | 612 | 2.0E-126 |
| sp|Q08986|SAM3_YEAST | S-adenosylmethionine permease SAM3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SAM3 PE=1 SV=1 | 18 | 612 | 2.0E-125 |
| sp|Q92367|AAP1_SCHPO | Amino-acid permease 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=aap1 PE=3 SV=1 | 102 | 584 | 1.0E-116 |
| sp|P32487|LYP1_YEAST | Lysine-specific permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LYP1 PE=1 SV=2 | 95 | 603 | 3.0E-105 |
| sp|P04817|CAN1_YEAST | Arginine permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CAN1 PE=1 SV=2 | 92 | 603 | 4.0E-101 |
| sp|P38971|ALP1_YEAST | Basic amino-acid permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALP1 PE=1 SV=2 | 98 | 611 | 2.0E-98 |
| sp|P25737|LYSP_ECOLI | Lysine-specific permease OS=Escherichia coli (strain K12) GN=lysP PE=1 SV=5 | 97 | 577 | 1.0E-94 |
| sp|P15380|PUT4_YEAST | Proline-specific permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PUT4 PE=2 SV=2 | 92 | 596 | 4.0E-89 |
| sp|P53388|DIP5_YEAST | Dicarboxylic amino acid permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DIP5 PE=1 SV=1 | 92 | 598 | 1.0E-86 |
| sp|P43059|CAN1_CANAW | Lysine/arginine permease OS=Candida albicans (strain WO-1) GN=CAN1 PE=3 SV=2 | 98 | 586 | 7.0E-86 |
| sp|Q9URZ3|PUT4_SCHPO | Probable proline-specific permease put4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=put4 PE=3 SV=1 | 100 | 581 | 1.0E-83 |
| sp|O74543|YCV4_SCHPO | Uncharacterized amino-acid permease C777.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC777.04 PE=3 SV=1 | 98 | 577 | 3.0E-83 |
| sp|O59831|YCUB_SCHPO | Uncharacterized amino-acid permease C965.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC965.11c PE=3 SV=1 | 90 | 583 | 5.0E-83 |
| sp|Q9C0V0|YQD2_SCHPO | Probable amino-acid permease PB1C11.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.02 PE=3 SV=1 | 98 | 586 | 1.0E-82 |
| sp|P18696|PUTX_EMENI | Proline-specific permease OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=prnB PE=2 SV=2 | 100 | 598 | 6.0E-77 |
| sp|P39137|ROCE_BACSU | Amino-acid permease RocE OS=Bacillus subtilis (strain 168) GN=rocE PE=2 SV=1 | 98 | 578 | 9.0E-76 |
| sp|P43548|AGP3_YEAST | General amino acid permease AGP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AGP3 PE=1 SV=1 | 95 | 584 | 4.0E-75 |
| sp|P42087|HUTM_BACSU | Putative histidine permease OS=Bacillus subtilis (strain 168) GN=hutM PE=3 SV=2 | 92 | 584 | 1.0E-73 |
| sp|P39636|ROCC_BACSU | Amino-acid permease RocC OS=Bacillus subtilis (strain 168) GN=rocC PE=2 SV=1 | 91 | 564 | 1.0E-72 |
| sp|P38090|AGP2_YEAST | General amino acid permease AGP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AGP2 PE=1 SV=1 | 100 | 609 | 4.0E-68 |
| sp|P59737|AROP_SHIFL | Aromatic amino acid transport protein AroP OS=Shigella flexneri GN=aroP PE=3 SV=1 | 98 | 538 | 5.0E-68 |
| sp|Q8FL49|AROP_ECOL6 | Aromatic amino acid transport protein AroP OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=aroP PE=3 SV=1 | 98 | 538 | 5.0E-68 |
| sp|P15993|AROP_ECOLI | Aromatic amino acid transport protein AroP OS=Escherichia coli (strain K12) GN=aroP PE=1 SV=3 | 98 | 538 | 9.0E-68 |
| sp|Q8X968|AROP_ECO57 | Aromatic amino acid transport protein AroP OS=Escherichia coli O157:H7 GN=aroP PE=3 SV=1 | 98 | 538 | 2.0E-67 |
| sp|O31462|YBGF_BACSU | Uncharacterized amino acid permease YbgF OS=Bacillus subtilis (strain 168) GN=ybgF PE=3 SV=1 | 89 | 569 | 5.0E-67 |
| sp|P24207|PHEP_ECOLI | Phenylalanine-specific permease OS=Escherichia coli (strain K12) GN=pheP PE=1 SV=1 | 92 | 522 | 5.0E-67 |
| sp|Q47689|MMUP_ECOLI | Probable S-methylmethionine permease OS=Escherichia coli (strain K12) GN=mmuP PE=3 SV=2 | 95 | 559 | 5.0E-66 |
| sp|O34618|YTNA_BACSU | Uncharacterized amino acid permease YtnA OS=Bacillus subtilis (strain 168) GN=ytnA PE=3 SV=1 | 91 | 522 | 5.0E-66 |
| sp|P0CK99|AROP_SALTY | Aromatic amino acid transport protein AroP OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=aroP PE=3 SV=1 | 98 | 493 | 3.0E-65 |
| sp|P0A188|AROP_SALTI | Aromatic amino acid transport protein AroP OS=Salmonella typhi GN=aroP PE=3 SV=1 | 98 | 493 | 3.0E-65 |
| sp|E1W822|AROP_SALTS | Aromatic amino acid transport protein AroP OS=Salmonella typhimurium (strain SL1344) GN=aroP PE=3 SV=1 | 98 | 493 | 3.0E-65 |
| sp|P46349|GABP_BACSU | GABA permease OS=Bacillus subtilis (strain 168) GN=gabP PE=1 SV=3 | 91 | 487 | 1.0E-59 |
| sp|P96704|YDGF_BACSU | Uncharacterized transporter YdgF OS=Bacillus subtilis (strain 168) GN=ydgF PE=3 SV=1 | 98 | 523 | 5.0E-59 |
| sp|P0AAE0|CYCA_ECOLI | D-serine/D-alanine/glycine transporter OS=Escherichia coli (strain K12) GN=cycA PE=1 SV=1 | 94 | 522 | 3.0E-55 |
| sp|P0AAE1|CYCA_ECO57 | D-serine/D-alanine/glycine transporter OS=Escherichia coli O157:H7 GN=cycA PE=3 SV=1 | 94 | 522 | 3.0E-55 |
| sp|P77610|ANSP_ECOLI | L-asparagine permease OS=Escherichia coli (strain K12) GN=ansP PE=3 SV=2 | 85 | 488 | 8.0E-55 |
| sp|O06005|AAPA_BACSU | Amino-acid permease AapA OS=Bacillus subtilis (strain 168) GN=aapA PE=3 SV=2 | 98 | 522 | 1.0E-54 |
| sp|Q9X7P0|ANSP_STRCO | L-asparagine permease OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=ansP PE=3 SV=1 | 67 | 490 | 4.0E-53 |
| sp|P37460|PROY_SALTY | Proline-specific permease ProY OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=proY PE=3 SV=3 | 93 | 514 | 6.0E-53 |
| sp|Q03770|SSY1_YEAST | SPS-sensor component SSY1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SSY1 PE=1 SV=1 | 98 | 586 | 1.0E-52 |
| sp|P40812|ANSP_SALTY | L-asparagine permease OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=ansP PE=3 SV=1 | 91 | 488 | 4.0E-52 |
| sp|P25527|GABP_ECOLI | GABA permease OS=Escherichia coli (strain K12) GN=gabP PE=1 SV=1 | 102 | 487 | 6.0E-52 |
| sp|P0A189|YIFK_SALTY | Probable transport protein YifK OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=yifK PE=3 SV=1 | 98 | 525 | 2.0E-51 |
| sp|P0A190|YIFK_SALTI | Probable transport protein YifK OS=Salmonella typhi GN=yifK PE=3 SV=1 | 98 | 525 | 2.0E-51 |
| sp|P27837|YIFK_ECOLI | Probable transport protein YifK OS=Escherichia coli (strain K12) GN=yifK PE=1 SV=4 | 98 | 525 | 4.0E-51 |
| sp|Q46065|AROP_CORGL | Aromatic amino acid transport protein AroP OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=aroP PE=3 SV=1 | 91 | 487 | 1.0E-50 |
| sp|Q9I703|BAUD_PSEAE | Probable GABA permease OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=bauD PE=2 SV=1 | 95 | 497 | 5.0E-50 |
| sp|P0AAE2|PROY_ECOLI | Proline-specific permease ProY OS=Escherichia coli (strain K12) GN=proY PE=1 SV=1 | 91 | 487 | 4.0E-49 |
| sp|P0AAE3|PROY_ECOL6 | Proline-specific permease ProY OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=proY PE=3 SV=1 | 91 | 487 | 4.0E-49 |
| sp|P0AAE4|PROY_ECO57 | Proline-specific permease ProY OS=Escherichia coli O157:H7 GN=proY PE=3 SV=1 | 91 | 487 | 4.0E-49 |
| sp|P0A4W1|ANSP2_MYCBO | L-asparagine permease 2 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ansP2 PE=3 SV=1 | 82 | 526 | 5.0E-49 |
| sp|P9WQM7|ANSP2_MYCTU | L-asparagine permease 2 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=ansP2 PE=1 SV=1 | 82 | 526 | 5.0E-49 |
| sp|P9WQM6|ANSP2_MYCTO | L-asparagine permease 2 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=ansP2 PE=3 SV=1 | 82 | 526 | 5.0E-49 |
| sp|P9WQM9|ANSP1_MYCTU | L-asparagine permease 1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=ansP1 PE=1 SV=1 | 95 | 487 | 1.0E-44 |
| sp|P9WQM8|ANSP1_MYCTO | L-asparagine permease 1 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=ansP1 PE=3 SV=1 | 95 | 487 | 1.0E-44 |
| sp|Q7VEQ4|ANSP1_MYCBO | L-asparagine permease 1 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ansP1 PE=3 SV=1 | 95 | 487 | 6.0E-44 |
| sp|P54425|YBXG_BACSU | Uncharacterized transporter YbxG OS=Bacillus subtilis (strain 168) GN=ybxG PE=3 SV=2 | 94 | 525 | 7.0E-44 |
| sp|O32257|YVBW_BACSU | Uncharacterized amino acid permease YvbW OS=Bacillus subtilis (strain 168) GN=yvbW PE=2 SV=1 | 91 | 487 | 2.0E-35 |
| sp|P94383|YCGH_BACSU | Uncharacterized transporter YcgH OS=Bacillus subtilis (strain 168) GN=ycgH PE=3 SV=3 | 106 | 475 | 2.0E-21 |
| sp|P45495|YPEV_LACDL | Uncharacterized transporter in pepV 3'region (Fragment) OS=Lactobacillus delbrueckii subsp. lactis PE=3 SV=1 | 90 | 260 | 4.0E-19 |
| sp|Q797A7|YFNA_BACSU | Uncharacterized amino acid permease YfnA OS=Bacillus subtilis (strain 168) GN=yfnA PE=3 SV=1 | 92 | 429 | 7.0E-13 |
| sp|Q8GYB4|CAAT3_ARATH | Cationic amino acid transporter 3, mitochondrial OS=Arabidopsis thaliana GN=CAT3 PE=2 SV=1 | 98 | 485 | 6.0E-11 |
| sp|Q8W4K3|CAAT4_ARATH | Cationic amino acid transporter 4, vacuolar OS=Arabidopsis thaliana GN=CAT4 PE=2 SV=1 | 98 | 486 | 9.0E-09 |
| sp|Q6DCE8|CTR2_XENLA | Cationic amino acid transporter 2 OS=Xenopus laevis GN=slc7a2 PE=2 SV=1 | 75 | 486 | 9.0E-09 |
| sp|Q8BLQ7|CTR4_MOUSE | Cationic amino acid transporter 4 OS=Mus musculus GN=Slc7a4 PE=1 SV=1 | 92 | 359 | 4.0E-08 |
| sp|A8I499|CTR2_PIG | Cationic amino acid transporter 2 OS=Sus scrofa GN=SLC7A2 PE=2 SV=1 | 95 | 510 | 6.0E-08 |
| sp|O43246|CTR4_HUMAN | Cationic amino acid transporter 4 OS=Homo sapiens GN=SLC7A4 PE=2 SV=3 | 92 | 359 | 7.0E-08 |
| sp|Q9ASS7|CAAT2_ARATH | Cationic amino acid transporter 2, vacuolar OS=Arabidopsis thaliana GN=CAT2 PE=2 SV=1 | 92 | 455 | 1.0E-07 |
| sp|P52569|CTR2_HUMAN | Cationic amino acid transporter 2 OS=Homo sapiens GN=SLC7A2 PE=1 SV=2 | 95 | 486 | 2.0E-07 |
| sp|B5D5N9|CTR2_RAT | Cationic amino acid transporter 2 OS=Rattus norvegicus GN=Slc7a2 PE=1 SV=1 | 95 | 486 | 3.0E-07 |
| sp|O07576|YHDG_BACSU | Uncharacterized amino acid permease YhdG OS=Bacillus subtilis (strain 168) GN=yhdG PE=2 SV=1 | 88 | 437 | 5.0E-07 |
| sp|Q84MA5|CAAT1_ARATH | Cationic amino acid transporter 1 OS=Arabidopsis thaliana GN=CAT1 PE=1 SV=1 | 98 | 453 | 5.0E-07 |
| sp|Q45577|YBEC_BACSU | Probable amino acid-proton symporter YbeC OS=Bacillus subtilis (strain 168) GN=ybeC PE=3 SV=3 | 98 | 426 | 8.0E-07 |
| sp|P18581|CTR2_MOUSE | Cationic amino acid transporter 2 OS=Mus musculus GN=Slc7a2 PE=1 SV=3 | 95 | 486 | 1.0E-06 |
| sp|B0UYF2|S7A14_DANRE | Probable cationic amino acid transporter OS=Danio rerio GN=slc7a14a PE=3 SV=1 | 98 | 362 | 1.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051179 | localization | No |
| GO:0005575 | cellular_component | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 43 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 136 | 158 | 22 |
| 2 | 178 | 200 | 22 |
| 3 | 212 | 234 | 22 |
| 4 | 244 | 266 | 22 |
| 5 | 329 | 348 | 19 |
| 6 | 392 | 414 | 22 |
| 7 | 434 | 453 | 19 |
| 8 | 463 | 485 | 22 |
| 9 | 505 | 527 | 22 |
| 10 | 542 | 561 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4476 MAPHRDIELNTLNTLEVKEDSLTHGSSHSMREPTYERRATPRLQRLFGSFKRDADTNFFPSDPLSQVDSLSTAGR PRGYGYPYYDLHLAALESADAGLARKLKGRHLQTIAIGGSIGTGLFVASGKSLHTGGPASLLIAFLTIGAMLYCT CQALGELAVIFPVAGSFSSWATRFLDPSWGFAMGWNYALNWLTVLPLEVIAAAMTIRYWNDGLSSSIFVGIFLVA ITAINLFGVKGYGEAEFTFSIIKVIAIIGFILLGIVLNCGGTPDRGYIGGEFWHNPGAFNNGFKGLCSVFVTAAF AFSGTELVGLAAAETANPRKSLPTAIKQVFWRITLFYVVALTLVGLLVRFDHPQLDDDSDNPRGKVDAKASPFVI AIEAAGIDILPSVMNSVILIAVLSVGNSAVFGSSRTLAALAKLNQAPKMLGYVDGRGRPLVAIAVAVVFGLLAFL ADLQQQYAVLDWLLAMSGLSTIFTWGSICLCHIRFRRAWALRGRSLDDIPFHSQVGVLGSYVGLALNALVLVAQF WVGAFPVGRPLMPADRVEHFFLKYVGVPIVVLFYLLHKLYYRTSYVRVRDLDVDTGRRDFNLPILLAQERRERAA WPRWKKLYKFLC* |
| Coding | >Hirsu2|4476 ATGGCGCCGCACCGCGACATCGAGCTCAACACGCTCAACACGCTCGAGGTCAAGGAGGACTCGCTCACGCACGGC AGCTCCCATAGCATGCGCGAGCCCACCTACGAGCGCCGAGCGACCCCCCGCCTGCAGCGCCTGTTCGGCAGCTTC AAGCGCGACGCCGACACCAACTTCTTCCCCAGCGACCCGCTCAGCCAGGTCGACAGCCTCAGCACCGCCGGCCGC CCGCGCGGCTACGGCTACCCCTACTACGACCTGCACCTGGCCGCCCTCGAGTCCGCCGACGCGGGGCTGGCCCGC AAGCTCAAGGGCCGCCACCTGCAGACCATCGCCATCGGCGGCTCCATCGGCACCGGCCTCTTCGTCGCCTCGGGC AAGTCGCTGCACACGGGCGGCCCGGCCTCGCTGCTCATCGCCTTCCTCACCATCGGCGCCATGCTCTACTGCACC TGCCAAGCCCTGGGCGAGCTGGCCGTCATCTTCCCCGTCGCCGGCTCCTTCTCCTCCTGGGCCACCCGCTTCCTC GATCCCTCCTGGGGCTTCGCCATGGGCTGGAACTACGCCCTCAATTGGCTGACCGTCCTGCCGCTCGAGGTCATC GCCGCCGCCATGACGATTCGCTACTGGAACGACGGCCTCTCGAGCTCCATCTTCGTCGGCATCTTCCTCGTCGCC ATCACCGCTATCAACCTGTTTGGGGTCAAGGGGTACGGCGAGGCCGAGTTTACCTTTTCCATCATCAAGGTCATT GCCATTATCGGCTTCATCCTCCTCGGCATCGTCCTCAACTGCGGCGGGACGCCCGACCGGGGGTACATCGGCGGC GAGTTCTGGCACAACCCGGGCGCCTTCAACAACGGGTTCAAGGGGCTCTGCAGCGTCTTCGTCACGGCCGCCTTC GCCTTCAGCGGGACGGAGCTGGTCGGGCTGGCGGCGGCGGAGACGGCCAACCCGCGCAAGTCGCTGCCGACGGCC ATCAAGCAGGTGTTTTGGCGCATCACGCTCTTCTACGTCGTGGCCCTGACGCTCGTCGGGCTGCTGGTCCGCTTC GACCACCCGCAGCTCGACGACGACTCGGACAACCCGCGCGGCAAGGTGGACGCCAAGGCGTCGCCGTTCGTCATC GCCATCGAGGCGGCCGGCATCGACATCCTGCCGTCGGTCATGAACTCGGTCATCCTCATCGCCGTCCTGTCCGTC GGCAACTCGGCCGTCTTCGGCTCGTCGCGCACGCTGGCCGCGCTGGCCAAGCTCAACCAGGCGCCCAAGATGCTG GGCTACGTCGACGGCCGGGGCCGGCCGCTGGTGGCCATCGCCGTCGCCGTCGTCTTCGGCCTGCTGGCCTTCCTG GCCGACCTGCAGCAGCAGTACGCCGTGCTCGACTGGCTGCTGGCCATGTCGGGCCTGTCGACCATCTTCACCTGG GGCTCCATCTGCCTCTGCCACATCCGCTTCCGCCGCGCCTGGGCCCTGCGCGGCCGCAGCCTCGACGACATCCCC TTCCACTCGCAGGTCGGCGTGCTCGGCTCCTACGTCGGCCTCGCCCTCAACGCCCTCGTCCTCGTCGCCCAGTTC TGGGTCGGCGCCTTCCCCGTCGGCCGCCCGCTCATGCCCGCCGACCGCGTCGAGCACTTCTTCCTCAAGTACGTC GGCGTCCCCATCGTCGTCCTCTTTTACCTGCTGCACAAGCTCTACTACCGCACCTCGTACGTCCGCGTCCGCGAC CTCGACGTCGACACCGGCCGCCGCGACTTCAACCTGCCCATCCTCCTGGCCCAGGAGCGCCGCGAGCGCGCCGCC TGGCCGCGCTGGAAGAAGCTCTACAAGTTTCTCTGCTGA |
| Transcript | >Hirsu2|4476 ATGGCGCCGCACCGCGACATCGAGCTCAACACGCTCAACACGCTCGAGGTCAAGGAGGACTCGCTCACGCACGGC AGCTCCCATAGCATGCGCGAGCCCACCTACGAGCGCCGAGCGACCCCCCGCCTGCAGCGCCTGTTCGGCAGCTTC AAGCGCGACGCCGACACCAACTTCTTCCCCAGCGACCCGCTCAGCCAGGTCGACAGCCTCAGCACCGCCGGCCGC CCGCGCGGCTACGGCTACCCCTACTACGACCTGCACCTGGCCGCCCTCGAGTCCGCCGACGCGGGGCTGGCCCGC AAGCTCAAGGGCCGCCACCTGCAGACCATCGCCATCGGCGGCTCCATCGGCACCGGCCTCTTCGTCGCCTCGGGC AAGTCGCTGCACACGGGCGGCCCGGCCTCGCTGCTCATCGCCTTCCTCACCATCGGCGCCATGCTCTACTGCACC TGCCAAGCCCTGGGCGAGCTGGCCGTCATCTTCCCCGTCGCCGGCTCCTTCTCCTCCTGGGCCACCCGCTTCCTC GATCCCTCCTGGGGCTTCGCCATGGGCTGGAACTACGCCCTCAATTGGCTGACCGTCCTGCCGCTCGAGGTCATC GCCGCCGCCATGACGATTCGCTACTGGAACGACGGCCTCTCGAGCTCCATCTTCGTCGGCATCTTCCTCGTCGCC ATCACCGCTATCAACCTGTTTGGGGTCAAGGGGTACGGCGAGGCCGAGTTTACCTTTTCCATCATCAAGGTCATT GCCATTATCGGCTTCATCCTCCTCGGCATCGTCCTCAACTGCGGCGGGACGCCCGACCGGGGGTACATCGGCGGC GAGTTCTGGCACAACCCGGGCGCCTTCAACAACGGGTTCAAGGGGCTCTGCAGCGTCTTCGTCACGGCCGCCTTC GCCTTCAGCGGGACGGAGCTGGTCGGGCTGGCGGCGGCGGAGACGGCCAACCCGCGCAAGTCGCTGCCGACGGCC ATCAAGCAGGTGTTTTGGCGCATCACGCTCTTCTACGTCGTGGCCCTGACGCTCGTCGGGCTGCTGGTCCGCTTC GACCACCCGCAGCTCGACGACGACTCGGACAACCCGCGCGGCAAGGTGGACGCCAAGGCGTCGCCGTTCGTCATC GCCATCGAGGCGGCCGGCATCGACATCCTGCCGTCGGTCATGAACTCGGTCATCCTCATCGCCGTCCTGTCCGTC GGCAACTCGGCCGTCTTCGGCTCGTCGCGCACGCTGGCCGCGCTGGCCAAGCTCAACCAGGCGCCCAAGATGCTG GGCTACGTCGACGGCCGGGGCCGGCCGCTGGTGGCCATCGCCGTCGCCGTCGTCTTCGGCCTGCTGGCCTTCCTG GCCGACCTGCAGCAGCAGTACGCCGTGCTCGACTGGCTGCTGGCCATGTCGGGCCTGTCGACCATCTTCACCTGG GGCTCCATCTGCCTCTGCCACATCCGCTTCCGCCGCGCCTGGGCCCTGCGCGGCCGCAGCCTCGACGACATCCCC TTCCACTCGCAGGTCGGCGTGCTCGGCTCCTACGTCGGCCTCGCCCTCAACGCCCTCGTCCTCGTCGCCCAGTTC TGGGTCGGCGCCTTCCCCGTCGGCCGCCCGCTCATGCCCGCCGACCGCGTCGAGCACTTCTTCCTCAAGTACGTC GGCGTCCCCATCGTCGTCCTCTTTTACCTGCTGCACAAGCTCTACTACCGCACCTCGTACGTCCGCGTCCGCGAC CTCGACGTCGACACCGGCCGCCGCGACTTCAACCTGCCCATCCTCCTGGCCCAGGAGCGCCGCGAGCGCGCCGCC TGGCCGCGCTGGAAGAAGCTCTACAAGTTTCTCTGCTGA |
| Gene | >Hirsu2|4476 ATGGCGCCGCACCGCGACATCGAGCTCAACACGCTCAACACGCTCGAGGTCAAGGAGGACTCGCTCACGCACGGC AGCTCCCATAGCATGCGCGAGCCCACCTACGAGCGCCGAGCGACCCCCCGCCTGCAGCGCCTGTTCGGCAGCTTC AAGCGCGACGCCGACACCAACTTCTTCCCCAGCGACCCGCTCAGCCAGGTCGACAGCCTCAGCACCGCCGGCCGC CCGCGCGGCTACGGCTACCCCTACTACGACCTGCACCTGGCCGCCCTCGAGTCCGCCGACGCGGGGCTGGCCCGC AAGCTCAAGGGCCGCCACCTGCAGACCATCGCCATCGGCGGCTCCATCGGCACCGGCCTCTTCGTCGCCTCGGGC AAGTCGCTGCACACGGGCGGCCCGGCCTCGCTGCTCATCGCCTTCCTCACCATCGGCGCCATGCTCTACTGCACC TGCCAAGCCCTGGGCGAGCTGGCCGTCATCTTCCCCGTCGCCGGCTCCTTCTCCTCCTGGGCCACCCGCTTCCTC GATCCCTCCTGGGGCTTCGCCATGGGCTGGAAGTGAGTCGTCTTCCTTTGCCGCCGGCCGACGCCTCCTCCCCCT TCCCGATTGCGCGCCGCCCGCTGACTCCCGAGTGCCAGCTACGCCCTCAATTGGCTGACCGTCCTGCCGCTCGAG GTCATCGCCGCCGCCATGACGATTCGCTACTGGAACGACGGCCTCTCGAGCTCCATCTTCGTCGGCATCTTCCTC GTCGCCATCACCGCTATCAACCTGTTTGGGGTCAAGGGGTACGGCGAGGCCGAGTTTACCTTTTCCATCATCAAG GTCATTGCCATTATCGGCTTCATGTGAGTCGGATTCAACGTCTGAGTGGCGTGTGTGTGTGTGTGTGTAAGAGAG AGAGAGAGAAGGAGGGAGGGAGAGGGAGAGGGAGAGAGAGAGAGAAGGAGGGAGGGAGAGGGAGAGGGAGAGAGA GAGAGAAAAAGTGTATGTGTGGGCTGACACGCTCGTTCTCCGTTCCCCGCAGCCTCCTCGGCATCGTCCTCAACT GCGGCGGGACGCCCGACCGGGGGTACATCGGCGGCGAGTTCTGGCACAACCCGGGCGCCTTCAACAACGGGTTCA AGGGGCTCTGCAGCGTCTTCGTCACGGCCGCCTTCGCCTTCAGCGGGACGGAGCTGGTCGGGCTGGCGGCGGCGG AGACGGCCAACCCGCGCAAGTCGCTGCCGACGGCCATCAAGCAGGTGTTTTGGCGCATCACGCTCTTCTACGTCG TGGCCCTGACGCTCGTCGGGCTGCTGGTCCGCTTCGACCACCCGCAGCTCGACGACGACTCGGACAACCCGCGCG GCAAGGTGGACGCCAAGGCGTCGCCGTTCGTCATCGCCATCGAGGCGGCCGGCATCGACATCCTGCCGTCGGTCA TGAACTCGGTCATCCTCATCGCCGTCCTGTCCGTCGGCAACTCGGCCGTCTTCGGCTCGTCGCGCACGCTGGCCG CGCTGGCCAAGCTCAACCAGGCGCCCAAGATGCTGGGCTACGTCGACGGCCGGGGCCGGCCGCTGGTGGCCATCG CCGTCGCCGTCGTCTTCGGCCTGCTGGCCTTCCTGGCCGACCTGCAGCAGCAGTACGCCGTGCTCGACTGGCTGC TGGCCATGTCGGGCCTGTCGACCATCTTCACCTGGGGCTCCATCTGCCTCTGCCACATCCGCTTCCGCCGCGCCT GGGCCCTGCGCGGCCGCAGCCTCGACGACATCCCCTTCCACTCGCAGGTCGGCGTGCTCGGCTCCTACGTCGGCC TCGCCCTCAACGCCCTCGTCCTCGTCGCCCAGTTCTGGGTCGGCGCCTTCCCCGTCGGCCGCCCGCTCATGCCCG CCGACCGCGTCGAGCACTTCTTCCTCAAGTACGTCGGCGTCCCCATCGTCGTCCTCTTTTACCTGCTGCACAAGC TCTACTACCGCACCTCGTACGTCCGCGTCCGCGACCTCGACGTCGACACCGGCCGCCGCGACTTCAACCTGCCCA TCCTCCTGGCCCAGGAGCGCCGCGAGCGCGCCGCCTGGCCGCGCTGGAAGAAGCTCTACAAGTTTCTCTGCTGA |