Protein ID | Hirsu2|4465 |
Gene name | |
Location | Contig_2271:245..1401 |
Strand | + |
Gene length (bp) | 1156 |
Transcript length (bp) | 321 |
Coding sequence length (bp) | 321 |
Protein length (aa) | 107 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.2211 | 0.117 | 0.7342 | 0.1679 | 0.165 | 0.0262 | 0.2954 | 0.2527 | 0.203 | 0.0091 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 22 | 0.614332 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 5 | 24 | 19 |
Orthofinder run ID | 4 |
Orthogroup | 2787 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|4465 MPSSAAIPFLVGMMLLTGVCNTLLTKYQDNQCVRHCGPDDPSIPTHFEQPLDYHPPPQVIKLSIQRPTSVVPTRD ARSPYHDQHRGLQLFRSGCDPQRQRYFKVDD* |
Coding | >Hirsu2|4465 ATGCCGTCCAGCGCAGCCATCCCCTTTCTTGTGGGCATGATGCTATTGACCGGCGTGTGCAATACGCTGTTGACC AAGTATCAGGATAATCAATGTGTTCGACACTGCGGCCCGGACGATCCCAGCATCCCAACGCATTTCGAGCAGCCA CTGGACTATCACCCGCCGCCCCAGGTTATCAAGCTGTCGATTCAGCGCCCGACCTCGGTGGTTCCGACGAGAGAC GCCAGATCTCCTTATCATGATCAGCATCGGGGGCTTCAACTATTTCGGTCTGGCTGTGACCCGCAGCGTCAGCGC TACTTCAAGGTCGACGATTGA |
Transcript | >Hirsu2|4465 ATGCCGTCCAGCGCAGCCATCCCCTTTCTTGTGGGCATGATGCTATTGACCGGCGTGTGCAATACGCTGTTGACC AAGTATCAGGATAATCAATGTGTTCGACACTGCGGCCCGGACGATCCCAGCATCCCAACGCATTTCGAGCAGCCA CTGGACTATCACCCGCCGCCCCAGGTTATCAAGCTGTCGATTCAGCGCCCGACCTCGGTGGTTCCGACGAGAGAC GCCAGATCTCCTTATCATGATCAGCATCGGGGGCTTCAACTATTTCGGTCTGGCTGTGACCCGCAGCGTCAGCGC TACTTCAAGGTCGACGATTGA |
Gene | >Hirsu2|4465 ATGCCGTCCAGCGCAGCCATCCCCTTTCTTGTGGGCATGATGCTATTGACCGGCGTGTGCAATACGCTGTTGACC AAGTATCAGGTCAGTATGTTGACGATATGGACCGCGATTCTTACTTTCGTTAATCTGTTGCTAGGATAATCAATG TGTTCGACACTGCGGCCCGGACGATCCCAGCATCCCAACGCATTTCGAGCAGCCAGTACTGCAAACCGCCCAGAT GTTTGTTGGCGAGATGGGTTGCTGGTTAGTCGTCGGCCTTGTCTCGCTTTATCGCAGGCTCCTAGCTGGACTATC ACCCGCCGCCCCAGGTTATCAAGCTGTCGATTCAGCGCCCGACCTCGGTGGTTCCGACGAGAGACGCCAGAGTAT GTCGAGGCCCGAGTCCGATATTCCGTCCATCCTCCGCGGTTCGCGTGTCTTGCTGTTGGCACTCCCAGCTGTCTG TGACATATGCGGTACCACACTCATGAATGCCGGACTGCTCCTCGTTGCGGCTTCAGTGTACCAAATGACCCGCGG TGCACTCGTTCTGTTCGTTGGCCTCTTCAGCGTCATTTTTCTGAACAGACATCTCCGCTTATTTCAGTGGCTTTC GCTTCTTGGCGTCGTACTAGGCGTTGGCGTTGTCGGCCTGGCTGGCGCTATTTGGCCTGACGAGATAAAAGCAGC GCAGCATGCTTCCGAACAGGCTGTCACGAGGGACGGGCTCTCTGCTGCCACCAGAGCCATTGTTGGTGTCTTGCT CATCGCTGGCGCACAGATATTTACAGCCACTCAGTTTGTGCTGGAGGAGTGGATGCTACAAAATTCCCCCATTGA ACCGATTCGTGTAGTCGGGTGGGAAGGCATCTTCGGTTTCTCCATCACACTTCTCGTCATGATCGCAATGCATTT TGCTGTGGGTCGCACAGATACCGGTCGATACGGATATTTTGACATGCAGGAAGGCCTGGGCCAGATGATGCAGAG GCGCATTTGGATATCTAGTCTCCTTATCATGATCAGCATCGGGTAAGGCAATGCGTGAGAGGCGCGACAAATGCG GGGAAAGATGGGAACTGACTGACCGTGCCTACATCCCCAGGGGCTTCAACTATTTCGGTCTGGCTGTGACCCGCA GCGTCAGCGCTACTTCAAGGTCGACGATTGA |