Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4465
Gene name
LocationContig_2271:245..1401
Strand+
Gene length (bp)1156
Transcript length (bp)321
Coding sequence length (bp)321
Protein length (aa) 107

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.2211 0.117 0.7342 0.1679 0.165 0.0262 0.2954 0.2527 0.203 0.0091

SignalP

SignalP signal predicted Location Score
Yes 1 - 22 0.614332

Transmembrane Domains

Domain # Start End Length
1 5 24 19

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2787
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1017
Ophiocordyceps australis map64 (Brazil) OphauB2|4057
Ophiocordyceps camponoti-floridani Ophcf2|05639
Ophiocordyceps camponoti-floridani Ophcf2|05640
Ophiocordyceps camponoti-rufipedis Ophun1|984
Ophiocordyceps kimflemingae Ophio5|6325
Ophiocordyceps subramaniannii Hirsu2|4465 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4465
MPSSAAIPFLVGMMLLTGVCNTLLTKYQDNQCVRHCGPDDPSIPTHFEQPLDYHPPPQVIKLSIQRPTSVVPTRD
ARSPYHDQHRGLQLFRSGCDPQRQRYFKVDD*
Coding >Hirsu2|4465
ATGCCGTCCAGCGCAGCCATCCCCTTTCTTGTGGGCATGATGCTATTGACCGGCGTGTGCAATACGCTGTTGACC
AAGTATCAGGATAATCAATGTGTTCGACACTGCGGCCCGGACGATCCCAGCATCCCAACGCATTTCGAGCAGCCA
CTGGACTATCACCCGCCGCCCCAGGTTATCAAGCTGTCGATTCAGCGCCCGACCTCGGTGGTTCCGACGAGAGAC
GCCAGATCTCCTTATCATGATCAGCATCGGGGGCTTCAACTATTTCGGTCTGGCTGTGACCCGCAGCGTCAGCGC
TACTTCAAGGTCGACGATTGA
Transcript >Hirsu2|4465
ATGCCGTCCAGCGCAGCCATCCCCTTTCTTGTGGGCATGATGCTATTGACCGGCGTGTGCAATACGCTGTTGACC
AAGTATCAGGATAATCAATGTGTTCGACACTGCGGCCCGGACGATCCCAGCATCCCAACGCATTTCGAGCAGCCA
CTGGACTATCACCCGCCGCCCCAGGTTATCAAGCTGTCGATTCAGCGCCCGACCTCGGTGGTTCCGACGAGAGAC
GCCAGATCTCCTTATCATGATCAGCATCGGGGGCTTCAACTATTTCGGTCTGGCTGTGACCCGCAGCGTCAGCGC
TACTTCAAGGTCGACGATTGA
Gene >Hirsu2|4465
ATGCCGTCCAGCGCAGCCATCCCCTTTCTTGTGGGCATGATGCTATTGACCGGCGTGTGCAATACGCTGTTGACC
AAGTATCAGGTCAGTATGTTGACGATATGGACCGCGATTCTTACTTTCGTTAATCTGTTGCTAGGATAATCAATG
TGTTCGACACTGCGGCCCGGACGATCCCAGCATCCCAACGCATTTCGAGCAGCCAGTACTGCAAACCGCCCAGAT
GTTTGTTGGCGAGATGGGTTGCTGGTTAGTCGTCGGCCTTGTCTCGCTTTATCGCAGGCTCCTAGCTGGACTATC
ACCCGCCGCCCCAGGTTATCAAGCTGTCGATTCAGCGCCCGACCTCGGTGGTTCCGACGAGAGACGCCAGAGTAT
GTCGAGGCCCGAGTCCGATATTCCGTCCATCCTCCGCGGTTCGCGTGTCTTGCTGTTGGCACTCCCAGCTGTCTG
TGACATATGCGGTACCACACTCATGAATGCCGGACTGCTCCTCGTTGCGGCTTCAGTGTACCAAATGACCCGCGG
TGCACTCGTTCTGTTCGTTGGCCTCTTCAGCGTCATTTTTCTGAACAGACATCTCCGCTTATTTCAGTGGCTTTC
GCTTCTTGGCGTCGTACTAGGCGTTGGCGTTGTCGGCCTGGCTGGCGCTATTTGGCCTGACGAGATAAAAGCAGC
GCAGCATGCTTCCGAACAGGCTGTCACGAGGGACGGGCTCTCTGCTGCCACCAGAGCCATTGTTGGTGTCTTGCT
CATCGCTGGCGCACAGATATTTACAGCCACTCAGTTTGTGCTGGAGGAGTGGATGCTACAAAATTCCCCCATTGA
ACCGATTCGTGTAGTCGGGTGGGAAGGCATCTTCGGTTTCTCCATCACACTTCTCGTCATGATCGCAATGCATTT
TGCTGTGGGTCGCACAGATACCGGTCGATACGGATATTTTGACATGCAGGAAGGCCTGGGCCAGATGATGCAGAG
GCGCATTTGGATATCTAGTCTCCTTATCATGATCAGCATCGGGTAAGGCAATGCGTGAGAGGCGCGACAAATGCG
GGGAAAGATGGGAACTGACTGACCGTGCCTACATCCCCAGGGGCTTCAACTATTTCGGTCTGGCTGTGACCCGCA
GCGTCAGCGCTACTTCAAGGTCGACGATTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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