Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|4462
Gene name
Location	Contig_227:27594..28693
Strand	+
Gene length (bp)	1099
Transcript length (bp)	921
Coding sequence length (bp)	921
Protein length (aa)	307

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00024	PAN_1	PAN domain	1.0E-04	49	95
PF00024	PAN_1	PAN domain	4.5E-06	182	219

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 25	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|4462 MKVISGSVLTAALLAADFAGLVAAQSYACPGNKGETIVRGGKKYELLCDKGFRGAAIEEKACDSLAECAERCAAN PKCVHGTLIGKSQKCALKAAGDAFDLAGLSTWKFVELAKETETKPPPPVDETQKPIGGGGGGGGSTVGQSSYSCP ADKNKKYTTNGITYELRCDTGHKVTHWTSDPCPSLKECADRCAKTAECYSCDYARSSKTCFLKKAPSETVPWTEG DAWFPAPCPDVRETEAKKEPEITSGLNCPSDNGKIWEGSDGTWFYLQCCTDTSAATVIEQGTASSHKDCLEKCVA NKKCRR*
Coding	>Hirsu2\|4462 ATGAAGGTTATTAGCGGCTCGGTGTTGACGGCAGCACTGCTCGCGGCCGACTTTGCCGGGCTCGTTGCTGCTCAG AGTTATGCTTGCCCTGGGAACAAGGGCGAGACGATTGTCAGAGGCGGCAAGAAGTACGAGTTGCTATGCGACAAG GGCTTCCGGGGGGCGGCGATAGAGGAGAAGGCGTGTGACAGCCTGGCCGAGTGTGCCGAGAGATGCGCGGCGAAC CCTAAGTGCGTGCACGGCACTCTGATCGGGAAGAGCCAGAAGTGCGCGCTGAAGGCAGCCGGCGACGCGTTCGAC CTCGCCGGGCTCTCGACCTGGAAGTTCGTGGAGCTGGCCAAGGAGACGGAGACTAAGCCGCCGCCGCCAGTCGAC GAGACCCAGAAGCCCATCGGCGGCGGAGGTGGTGGCGGCGGCAGCACCGTCGGCCAGTCGTCGTACTCTTGCCCG GCGGACAAGAACAAGAAATACACGACCAACGGCATCACGTACGAGCTGCGCTGCGACACGGGCCACAAGGTCACG CACTGGACGAGCGACCCTTGCCCGTCGCTGAAGGAGTGCGCGGACCGCTGCGCCAAGACAGCCGAGTGCTACAGC TGCGACTACGCGCGCAGCAGCAAGACGTGCTTCCTCAAGAAGGCGCCGTCCGAGACGGTCCCCTGGACGGAGGGA GACGCCTGGTTCCCGGCCCCGTGCCCGGACGTCCGCGAGACCGAGGCCAAGAAGGAGCCGGAGATTACGTCCGGC CTCAACTGTCCATCCGACAACGGCAAGATCTGGGAGGGCTCGGATGGCACCTGGTTCTATCTCCAGTGCTGCACC GACACGAGCGCCGCGACTGTCATCGAGCAGGGGACCGCCTCCAGCCACAAGGACTGCCTTGAGAAGTGCGTCGCG AACAAGAAATGTCGAAGGTGA
Transcript	>Hirsu2\|4462 ATGAAGGTTATTAGCGGCTCGGTGTTGACGGCAGCACTGCTCGCGGCCGACTTTGCCGGGCTCGTTGCTGCTCAG AGTTATGCTTGCCCTGGGAACAAGGGCGAGACGATTGTCAGAGGCGGCAAGAAGTACGAGTTGCTATGCGACAAG GGCTTCCGGGGGGCGGCGATAGAGGAGAAGGCGTGTGACAGCCTGGCCGAGTGTGCCGAGAGATGCGCGGCGAAC CCTAAGTGCGTGCACGGCACTCTGATCGGGAAGAGCCAGAAGTGCGCGCTGAAGGCAGCCGGCGACGCGTTCGAC CTCGCCGGGCTCTCGACCTGGAAGTTCGTGGAGCTGGCCAAGGAGACGGAGACTAAGCCGCCGCCGCCAGTCGAC GAGACCCAGAAGCCCATCGGCGGCGGAGGTGGTGGCGGCGGCAGCACCGTCGGCCAGTCGTCGTACTCTTGCCCG GCGGACAAGAACAAGAAATACACGACCAACGGCATCACGTACGAGCTGCGCTGCGACACGGGCCACAAGGTCACG CACTGGACGAGCGACCCTTGCCCGTCGCTGAAGGAGTGCGCGGACCGCTGCGCCAAGACAGCCGAGTGCTACAGC TGCGACTACGCGCGCAGCAGCAAGACGTGCTTCCTCAAGAAGGCGCCGTCCGAGACGGTCCCCTGGACGGAGGGA GACGCCTGGTTCCCGGCCCCGTGCCCGGACGTCCGCGAGACCGAGGCCAAGAAGGAGCCGGAGATTACGTCCGGC CTCAACTGTCCATCCGACAACGGCAAGATCTGGGAGGGCTCGGATGGCACCTGGTTCTATCTCCAGTGCTGCACC GACACGAGCGCCGCGACTGTCATCGAGCAGGGGACCGCCTCCAGCCACAAGGACTGCCTTGAGAAGTGCGTCGCG AACAAGAAATGTCGAAGGTGA
Gene	>Hirsu2\|4462 ATGAAGGTTATTAGCGGCTCGGTGTTGACGGCAGCACTGCTCGCGGCCGACTTTGCCGGGCTCGTTGCTGCTCAG AGTTATGCTTGCCCTGGGAACAAGGGCGAGACGATTGTCAGGTACGCCTAGCTAAGAAGAGGACTGGGGACGATT CTGGTGAATACCGGGCGGCTGACGGGATGGCAGAGGCGGCAAGAAGTACGAGTTGCTATGCGACAAGGGCTTCCG GGGGGCGGCGATAGAGGAGAAGGCGTGTGACAGCCTGGCCGAGTGTGCCGAGAGATGCGCGGCGAACCCTAAGTG CGTGCACGGCACTCTGATCGGGAAGAGCCAGAAGTGCGCGCTGAAGGCAGCCGGCGACGCGTTCGACCTCGCCGG GCTCTCGACCTGGAAGTTCGTGGAGCTGGCCAAGGAGACGGAGACTAAGCCGCCGCCGCCAGTCGACGAGACCCA GAAGCCCATCGGCGGCGGAGGTGGTGGCGGCGGCAGCACCGTCGGCCAGTCGTCGTACTCTTGCCCGGCGGACAA GAACAAGAAATACACGACGTGAGCCTGCTCCGGTTCTGGCATGACGAGATTCACCTGCTGACTCGGAGTCTCAGC AACGGCATCACGTACGAGCTGCGCTGCGACACGGGCCACAAGGTCACGCACTGGACGAGCGACCCTTGCCCGTCG CTGAAGGAGTGCGCGGACCGCTGCGCCAAGACAGCCGAGTGCTACAGCTGCGACTACGCGCGCAGCAGCAAGACG TGCTTCCTCAAGAAGGCGCCGTCCGAGACGGTCCCCTGGACGGAGGGAGACGCCTGGTTCCCGGCCCCGTGCCCG GACGTCCGCGAGACCGAGGCCAAGAAGGAGCCGGAGATTACGTCCGGCCTCAACTGTCCATCCGGTAAGGCGAGC GGGCCGTGTGTTCGAGTCCACGGACTGACGGGGACGATGCGCAGACAACGGCAAGATCTGGGAGGGCTCGGATGG CACCTGGTTCTATCTCCAGTGCTGCACCGACACGAGCGCCGCGACTGTCATCGAGCAGGGGACCGCCTCCAGCCA CAAGGACTGCCTTGAGAAGTGCGTCGCGAACAAGAAATGTCGAAGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail