Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4462
Gene name
LocationContig_227:27594..28693
Strand+
Gene length (bp)1099
Transcript length (bp)921
Coding sequence length (bp)921
Protein length (aa) 307

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00024 PAN_1 PAN domain 8.4E-05 49 95
PF00024 PAN_1 PAN domain 3.6E-06 182 219

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4462
MKVISGSVLTAALLAADFAGLVAAQSYACPGNKGETIVRGGKKYELLCDKGFRGAAIEEKACDSLAECAERCAAN
PKCVHGTLIGKSQKCALKAAGDAFDLAGLSTWKFVELAKETETKPPPPVDETQKPIGGGGGGGGSTVGQSSYSCP
ADKNKKYTTNGITYELRCDTGHKVTHWTSDPCPSLKECADRCAKTAECYSCDYARSSKTCFLKKAPSETVPWTEG
DAWFPAPCPDVRETEAKKEPEITSGLNCPSDNGKIWEGSDGTWFYLQCCTDTSAATVIEQGTASSHKDCLEKCVA
NKKCRR*
Coding >Hirsu2|4462
ATGAAGGTTATTAGCGGCTCGGTGTTGACGGCAGCACTGCTCGCGGCCGACTTTGCCGGGCTCGTTGCTGCTCAG
AGTTATGCTTGCCCTGGGAACAAGGGCGAGACGATTGTCAGAGGCGGCAAGAAGTACGAGTTGCTATGCGACAAG
GGCTTCCGGGGGGCGGCGATAGAGGAGAAGGCGTGTGACAGCCTGGCCGAGTGTGCCGAGAGATGCGCGGCGAAC
CCTAAGTGCGTGCACGGCACTCTGATCGGGAAGAGCCAGAAGTGCGCGCTGAAGGCAGCCGGCGACGCGTTCGAC
CTCGCCGGGCTCTCGACCTGGAAGTTCGTGGAGCTGGCCAAGGAGACGGAGACTAAGCCGCCGCCGCCAGTCGAC
GAGACCCAGAAGCCCATCGGCGGCGGAGGTGGTGGCGGCGGCAGCACCGTCGGCCAGTCGTCGTACTCTTGCCCG
GCGGACAAGAACAAGAAATACACGACCAACGGCATCACGTACGAGCTGCGCTGCGACACGGGCCACAAGGTCACG
CACTGGACGAGCGACCCTTGCCCGTCGCTGAAGGAGTGCGCGGACCGCTGCGCCAAGACAGCCGAGTGCTACAGC
TGCGACTACGCGCGCAGCAGCAAGACGTGCTTCCTCAAGAAGGCGCCGTCCGAGACGGTCCCCTGGACGGAGGGA
GACGCCTGGTTCCCGGCCCCGTGCCCGGACGTCCGCGAGACCGAGGCCAAGAAGGAGCCGGAGATTACGTCCGGC
CTCAACTGTCCATCCGACAACGGCAAGATCTGGGAGGGCTCGGATGGCACCTGGTTCTATCTCCAGTGCTGCACC
GACACGAGCGCCGCGACTGTCATCGAGCAGGGGACCGCCTCCAGCCACAAGGACTGCCTTGAGAAGTGCGTCGCG
AACAAGAAATGTCGAAGGTGA
Transcript >Hirsu2|4462
ATGAAGGTTATTAGCGGCTCGGTGTTGACGGCAGCACTGCTCGCGGCCGACTTTGCCGGGCTCGTTGCTGCTCAG
AGTTATGCTTGCCCTGGGAACAAGGGCGAGACGATTGTCAGAGGCGGCAAGAAGTACGAGTTGCTATGCGACAAG
GGCTTCCGGGGGGCGGCGATAGAGGAGAAGGCGTGTGACAGCCTGGCCGAGTGTGCCGAGAGATGCGCGGCGAAC
CCTAAGTGCGTGCACGGCACTCTGATCGGGAAGAGCCAGAAGTGCGCGCTGAAGGCAGCCGGCGACGCGTTCGAC
CTCGCCGGGCTCTCGACCTGGAAGTTCGTGGAGCTGGCCAAGGAGACGGAGACTAAGCCGCCGCCGCCAGTCGAC
GAGACCCAGAAGCCCATCGGCGGCGGAGGTGGTGGCGGCGGCAGCACCGTCGGCCAGTCGTCGTACTCTTGCCCG
GCGGACAAGAACAAGAAATACACGACCAACGGCATCACGTACGAGCTGCGCTGCGACACGGGCCACAAGGTCACG
CACTGGACGAGCGACCCTTGCCCGTCGCTGAAGGAGTGCGCGGACCGCTGCGCCAAGACAGCCGAGTGCTACAGC
TGCGACTACGCGCGCAGCAGCAAGACGTGCTTCCTCAAGAAGGCGCCGTCCGAGACGGTCCCCTGGACGGAGGGA
GACGCCTGGTTCCCGGCCCCGTGCCCGGACGTCCGCGAGACCGAGGCCAAGAAGGAGCCGGAGATTACGTCCGGC
CTCAACTGTCCATCCGACAACGGCAAGATCTGGGAGGGCTCGGATGGCACCTGGTTCTATCTCCAGTGCTGCACC
GACACGAGCGCCGCGACTGTCATCGAGCAGGGGACCGCCTCCAGCCACAAGGACTGCCTTGAGAAGTGCGTCGCG
AACAAGAAATGTCGAAGGTGA
Gene >Hirsu2|4462
ATGAAGGTTATTAGCGGCTCGGTGTTGACGGCAGCACTGCTCGCGGCCGACTTTGCCGGGCTCGTTGCTGCTCAG
AGTTATGCTTGCCCTGGGAACAAGGGCGAGACGATTGTCAGGTACGCCTAGCTAAGAAGAGGACTGGGGACGATT
CTGGTGAATACCGGGCGGCTGACGGGATGGCAGAGGCGGCAAGAAGTACGAGTTGCTATGCGACAAGGGCTTCCG
GGGGGCGGCGATAGAGGAGAAGGCGTGTGACAGCCTGGCCGAGTGTGCCGAGAGATGCGCGGCGAACCCTAAGTG
CGTGCACGGCACTCTGATCGGGAAGAGCCAGAAGTGCGCGCTGAAGGCAGCCGGCGACGCGTTCGACCTCGCCGG
GCTCTCGACCTGGAAGTTCGTGGAGCTGGCCAAGGAGACGGAGACTAAGCCGCCGCCGCCAGTCGACGAGACCCA
GAAGCCCATCGGCGGCGGAGGTGGTGGCGGCGGCAGCACCGTCGGCCAGTCGTCGTACTCTTGCCCGGCGGACAA
GAACAAGAAATACACGACGTGAGCCTGCTCCGGTTCTGGCATGACGAGATTCACCTGCTGACTCGGAGTCTCAGC
AACGGCATCACGTACGAGCTGCGCTGCGACACGGGCCACAAGGTCACGCACTGGACGAGCGACCCTTGCCCGTCG
CTGAAGGAGTGCGCGGACCGCTGCGCCAAGACAGCCGAGTGCTACAGCTGCGACTACGCGCGCAGCAGCAAGACG
TGCTTCCTCAAGAAGGCGCCGTCCGAGACGGTCCCCTGGACGGAGGGAGACGCCTGGTTCCCGGCCCCGTGCCCG
GACGTCCGCGAGACCGAGGCCAAGAAGGAGCCGGAGATTACGTCCGGCCTCAACTGTCCATCCGGTAAGGCGAGC
GGGCCGTGTGTTCGAGTCCACGGACTGACGGGGACGATGCGCAGACAACGGCAAGATCTGGGAGGGCTCGGATGG
CACCTGGTTCTATCTCCAGTGCTGCACCGACACGAGCGCCGCGACTGTCATCGAGCAGGGGACCGCCTCCAGCCA
CAAGGACTGCCTTGAGAAGTGCGTCGCGAACAAGAAATGTCGAAGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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