Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4462
Gene name
LocationContig_227:27594..28693
Strand+
Gene length (bp)1099
Transcript length (bp)921
Coding sequence length (bp)921
Protein length (aa) 307

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00024 PAN_1 PAN domain 1.0E-04 49 95
PF00024 PAN_1 PAN domain 4.5E-06 182 219

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.2035 0.0405 0.9615 0.1751 0.0816 0.0253 0.2297 0.1729 0.3123 0.0005

SignalP

SignalP signal predicted Location Score
Yes 1 - 24 0.999733

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4906
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-rufipedis Ophun1|69
Ophiocordyceps kimflemingae Ophio5|4627
Ophiocordyceps subramaniannii Hirsu2|1417
Ophiocordyceps subramaniannii Hirsu2|4462 (this protein)
Ophiocordyceps subramaniannii Hirsu2|5169
Ophiocordyceps subramaniannii Hirsu2|5170

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4462
MKVISGSVLTAALLAADFAGLVAAQSYACPGNKGETIVRGGKKYELLCDKGFRGAAIEEKACDSLAECAERCAAN
PKCVHGTLIGKSQKCALKAAGDAFDLAGLSTWKFVELAKETETKPPPPVDETQKPIGGGGGGGGSTVGQSSYSCP
ADKNKKYTTNGITYELRCDTGHKVTHWTSDPCPSLKECADRCAKTAECYSCDYARSSKTCFLKKAPSETVPWTEG
DAWFPAPCPDVRETEAKKEPEITSGLNCPSDNGKIWEGSDGTWFYLQCCTDTSAATVIEQGTASSHKDCLEKCVA
NKKCRR*
Coding >Hirsu2|4462
ATGAAGGTTATTAGCGGCTCGGTGTTGACGGCAGCACTGCTCGCGGCCGACTTTGCCGGGCTCGTTGCTGCTCAG
AGTTATGCTTGCCCTGGGAACAAGGGCGAGACGATTGTCAGAGGCGGCAAGAAGTACGAGTTGCTATGCGACAAG
GGCTTCCGGGGGGCGGCGATAGAGGAGAAGGCGTGTGACAGCCTGGCCGAGTGTGCCGAGAGATGCGCGGCGAAC
CCTAAGTGCGTGCACGGCACTCTGATCGGGAAGAGCCAGAAGTGCGCGCTGAAGGCAGCCGGCGACGCGTTCGAC
CTCGCCGGGCTCTCGACCTGGAAGTTCGTGGAGCTGGCCAAGGAGACGGAGACTAAGCCGCCGCCGCCAGTCGAC
GAGACCCAGAAGCCCATCGGCGGCGGAGGTGGTGGCGGCGGCAGCACCGTCGGCCAGTCGTCGTACTCTTGCCCG
GCGGACAAGAACAAGAAATACACGACCAACGGCATCACGTACGAGCTGCGCTGCGACACGGGCCACAAGGTCACG
CACTGGACGAGCGACCCTTGCCCGTCGCTGAAGGAGTGCGCGGACCGCTGCGCCAAGACAGCCGAGTGCTACAGC
TGCGACTACGCGCGCAGCAGCAAGACGTGCTTCCTCAAGAAGGCGCCGTCCGAGACGGTCCCCTGGACGGAGGGA
GACGCCTGGTTCCCGGCCCCGTGCCCGGACGTCCGCGAGACCGAGGCCAAGAAGGAGCCGGAGATTACGTCCGGC
CTCAACTGTCCATCCGACAACGGCAAGATCTGGGAGGGCTCGGATGGCACCTGGTTCTATCTCCAGTGCTGCACC
GACACGAGCGCCGCGACTGTCATCGAGCAGGGGACCGCCTCCAGCCACAAGGACTGCCTTGAGAAGTGCGTCGCG
AACAAGAAATGTCGAAGGTGA
Transcript >Hirsu2|4462
ATGAAGGTTATTAGCGGCTCGGTGTTGACGGCAGCACTGCTCGCGGCCGACTTTGCCGGGCTCGTTGCTGCTCAG
AGTTATGCTTGCCCTGGGAACAAGGGCGAGACGATTGTCAGAGGCGGCAAGAAGTACGAGTTGCTATGCGACAAG
GGCTTCCGGGGGGCGGCGATAGAGGAGAAGGCGTGTGACAGCCTGGCCGAGTGTGCCGAGAGATGCGCGGCGAAC
CCTAAGTGCGTGCACGGCACTCTGATCGGGAAGAGCCAGAAGTGCGCGCTGAAGGCAGCCGGCGACGCGTTCGAC
CTCGCCGGGCTCTCGACCTGGAAGTTCGTGGAGCTGGCCAAGGAGACGGAGACTAAGCCGCCGCCGCCAGTCGAC
GAGACCCAGAAGCCCATCGGCGGCGGAGGTGGTGGCGGCGGCAGCACCGTCGGCCAGTCGTCGTACTCTTGCCCG
GCGGACAAGAACAAGAAATACACGACCAACGGCATCACGTACGAGCTGCGCTGCGACACGGGCCACAAGGTCACG
CACTGGACGAGCGACCCTTGCCCGTCGCTGAAGGAGTGCGCGGACCGCTGCGCCAAGACAGCCGAGTGCTACAGC
TGCGACTACGCGCGCAGCAGCAAGACGTGCTTCCTCAAGAAGGCGCCGTCCGAGACGGTCCCCTGGACGGAGGGA
GACGCCTGGTTCCCGGCCCCGTGCCCGGACGTCCGCGAGACCGAGGCCAAGAAGGAGCCGGAGATTACGTCCGGC
CTCAACTGTCCATCCGACAACGGCAAGATCTGGGAGGGCTCGGATGGCACCTGGTTCTATCTCCAGTGCTGCACC
GACACGAGCGCCGCGACTGTCATCGAGCAGGGGACCGCCTCCAGCCACAAGGACTGCCTTGAGAAGTGCGTCGCG
AACAAGAAATGTCGAAGGTGA
Gene >Hirsu2|4462
ATGAAGGTTATTAGCGGCTCGGTGTTGACGGCAGCACTGCTCGCGGCCGACTTTGCCGGGCTCGTTGCTGCTCAG
AGTTATGCTTGCCCTGGGAACAAGGGCGAGACGATTGTCAGGTACGCCTAGCTAAGAAGAGGACTGGGGACGATT
CTGGTGAATACCGGGCGGCTGACGGGATGGCAGAGGCGGCAAGAAGTACGAGTTGCTATGCGACAAGGGCTTCCG
GGGGGCGGCGATAGAGGAGAAGGCGTGTGACAGCCTGGCCGAGTGTGCCGAGAGATGCGCGGCGAACCCTAAGTG
CGTGCACGGCACTCTGATCGGGAAGAGCCAGAAGTGCGCGCTGAAGGCAGCCGGCGACGCGTTCGACCTCGCCGG
GCTCTCGACCTGGAAGTTCGTGGAGCTGGCCAAGGAGACGGAGACTAAGCCGCCGCCGCCAGTCGACGAGACCCA
GAAGCCCATCGGCGGCGGAGGTGGTGGCGGCGGCAGCACCGTCGGCCAGTCGTCGTACTCTTGCCCGGCGGACAA
GAACAAGAAATACACGACGTGAGCCTGCTCCGGTTCTGGCATGACGAGATTCACCTGCTGACTCGGAGTCTCAGC
AACGGCATCACGTACGAGCTGCGCTGCGACACGGGCCACAAGGTCACGCACTGGACGAGCGACCCTTGCCCGTCG
CTGAAGGAGTGCGCGGACCGCTGCGCCAAGACAGCCGAGTGCTACAGCTGCGACTACGCGCGCAGCAGCAAGACG
TGCTTCCTCAAGAAGGCGCCGTCCGAGACGGTCCCCTGGACGGAGGGAGACGCCTGGTTCCCGGCCCCGTGCCCG
GACGTCCGCGAGACCGAGGCCAAGAAGGAGCCGGAGATTACGTCCGGCCTCAACTGTCCATCCGGTAAGGCGAGC
GGGCCGTGTGTTCGAGTCCACGGACTGACGGGGACGATGCGCAGACAACGGCAAGATCTGGGAGGGCTCGGATGG
CACCTGGTTCTATCTCCAGTGCTGCACCGACACGAGCGCCGCGACTGTCATCGAGCAGGGGACCGCCTCCAGCCA
CAAGGACTGCCTTGAGAAGTGCGTCGCGAACAAGAAATGTCGAAGGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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