Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4443
Gene name
LocationContig_2262:1297..2987
Strand-
Gene length (bp)1690
Transcript length (bp)1569
Coding sequence length (bp)1569
Protein length (aa) 523

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10453 NUFIP1 Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1) 4.6E-07 244 275

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 50 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4443
MATLRPPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAVVRAAAAGHYASSGRGRGGYGDRAGSKPPQVGQ
AFEHEPPVGGSYGQPYPHDPRAPPHFPPPQYAYSAPPPPPVAPVHQEGHHGQYHRRGRGGGHRDGARGRNGHSHT
HNHNHGHNHHNHHHGGDKARHQQRQSHSAAEAKVKTEVKTEAKMESPSAGKKKKRKTNTLGLTPGMEESESDDDD
GEEKALVALIGSEIMQITDVAAFLAERRKNYPTRARVEARKAAELARKDEDKAASLEKQADRLRRQLRKVESSIK
RKREQGDEGDEMRDSSEESSEDERPEVMSSRPDAAASPRGQARKADVTRHCKYYSTGGTCGKKGKCRFVHDPEVR
EAAIKEREANDGRMTIQQRLILNDKEQEDLTILQSIQYLREKGLMTSVPKPQAGHADGAVDGKDRPMKKEKADKA
AVVTSSLLPAAPPSLPEPPVKREAGSARRNPPPSIIPTANSVSSQGLEHYQGWLLQPYGSTNGKQSVSDDLP*
Coding >Hirsu2|4443
ATGGCCACCCTCCGCCCCCCCCCCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGCAGCCGTCGTACGGGCCGCCGCAGCAGGG
CACTACGCCTCCTCGGGCCGAGGCCGAGGCGGCTACGGCGACCGCGCCGGCTCCAAGCCTCCCCAGGTCGGCCAG
GCCTTCGAGCACGAGCCCCCAGTCGGCGGCTCCTACGGACAGCCATATCCTCACGACCCCCGTGCCCCCCCTCAC
TTCCCCCCTCCCCAGTACGCCTACTCCGCTCCGCCCCCTCCTCCCGTCGCTCCCGTCCACCAAGAGGGCCACCAT
GGTCAGTATCATCGTCGTGGCCGCGGCGGCGGCCACCGAGACGGGGCGCGGGGGCGCAACGGCCACAGCCACACG
CACAACCACAACCACGGCCACAACCACCACAACCACCACCACGGCGGAGACAAGGCCCGCCACCAGCAGCGGCAG
AGCCACTCGGCCGCCGAAGCCAAGGTCAAGACGGAGGTCAAGACGGAGGCCAAGATGGAGTCGCCGTCTGCCGGC
AAGAAGAAGAAGCGCAAGACCAACACGCTCGGCCTGACGCCCGGCATGGAGGAGTCGGAGTCGGACGACGACGAC
GGGGAAGAGAAGGCTCTTGTCGCTCTCATCGGGTCCGAAATCATGCAGATCACCGACGTCGCCGCCTTCCTGGCC
GAGCGGCGGAAGAACTACCCCACGAGGGCGCGCGTCGAGGCCCGCAAGGCTGCCGAGCTGGCACGGAAAGACGAG
GACAAGGCTGCCTCGCTGGAGAAACAGGCCGACCGGCTGAGGAGACAGCTCCGCAAAGTCGAGTCTTCCATCAAG
CGAAAGCGAGAGCAGGGAGACGAGGGCGACGAGATGAGGGACTCGTCGGAAGAGTCGTCCGAGGACGAGAGACCC
GAAGTCATGTCTTCTCGTCCGGACGCCGCCGCGTCCCCCCGCGGCCAGGCAAGGAAGGCCGACGTGACGCGGCAC
TGCAAGTACTACTCCACCGGCGGCACGTGCGGCAAGAAGGGCAAGTGCCGCTTCGTCCACGACCCGGAAGTTCGC
GAGGCGGCCATCAAGGAGCGGGAAGCCAACGACGGCCGGATGACGATCCAGCAGCGTCTGATCCTCAACGACAAG
GAACAGGAGGACCTGACGATCCTGCAGTCGATCCAGTATCTGCGCGAAAAGGGGCTGATGACGTCGGTCCCCAAG
CCGCAGGCCGGCCACGCCGACGGCGCCGTCGACGGCAAGGACAGGCCCATGAAGAAGGAGAAGGCGGACAAGGCG
GCCGTGGTGACGTCGAGCCTGCTGCCCGCCGCGCCGCCCTCGCTGCCGGAGCCGCCGGTGAAGAGGGAGGCCGGC
TCGGCCCGCCGCAACCCGCCGCCGTCCATCATCCCTACCGCTAATAGTGTCAGCAGTCAGGGGCTGGAGCACTAC
CAGGGCTGGCTGTTGCAGCCGTACGGCAGCACCAACGGCAAGCAGTCTGTGAGCGACGACCTGCCCTGA
Transcript >Hirsu2|4443
ATGGCCACCCTCCGCCCCCCCCCCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGCAGCCGTCGTACGGGCCGCCGCAGCAGGG
CACTACGCCTCCTCGGGCCGAGGCCGAGGCGGCTACGGCGACCGCGCCGGCTCCAAGCCTCCCCAGGTCGGCCAG
GCCTTCGAGCACGAGCCCCCAGTCGGCGGCTCCTACGGACAGCCATATCCTCACGACCCCCGTGCCCCCCCTCAC
TTCCCCCCTCCCCAGTACGCCTACTCCGCTCCGCCCCCTCCTCCCGTCGCTCCCGTCCACCAAGAGGGCCACCAT
GGTCAGTATCATCGTCGTGGCCGCGGCGGCGGCCACCGAGACGGGGCGCGGGGGCGCAACGGCCACAGCCACACG
CACAACCACAACCACGGCCACAACCACCACAACCACCACCACGGCGGAGACAAGGCCCGCCACCAGCAGCGGCAG
AGCCACTCGGCCGCCGAAGCCAAGGTCAAGACGGAGGTCAAGACGGAGGCCAAGATGGAGTCGCCGTCTGCCGGC
AAGAAGAAGAAGCGCAAGACCAACACGCTCGGCCTGACGCCCGGCATGGAGGAGTCGGAGTCGGACGACGACGAC
GGGGAAGAGAAGGCTCTTGTCGCTCTCATCGGGTCCGAAATCATGCAGATCACCGACGTCGCCGCCTTCCTGGCC
GAGCGGCGGAAGAACTACCCCACGAGGGCGCGCGTCGAGGCCCGCAAGGCTGCCGAGCTGGCACGGAAAGACGAG
GACAAGGCTGCCTCGCTGGAGAAACAGGCCGACCGGCTGAGGAGACAGCTCCGCAAAGTCGAGTCTTCCATCAAG
CGAAAGCGAGAGCAGGGAGACGAGGGCGACGAGATGAGGGACTCGTCGGAAGAGTCGTCCGAGGACGAGAGACCC
GAAGTCATGTCTTCTCGTCCGGACGCCGCCGCGTCCCCCCGCGGCCAGGCAAGGAAGGCCGACGTGACGCGGCAC
TGCAAGTACTACTCCACCGGCGGCACGTGCGGCAAGAAGGGCAAGTGCCGCTTCGTCCACGACCCGGAAGTTCGC
GAGGCGGCCATCAAGGAGCGGGAAGCCAACGACGGCCGGATGACGATCCAGCAGCGTCTGATCCTCAACGACAAG
GAACAGGAGGACCTGACGATCCTGCAGTCGATCCAGTATCTGCGCGAAAAGGGGCTGATGACGTCGGTCCCCAAG
CCGCAGGCCGGCCACGCCGACGGCGCCGTCGACGGCAAGGACAGGCCCATGAAGAAGGAGAAGGCGGACAAGGCG
GCCGTGGTGACGTCGAGCCTGCTGCCCGCCGCGCCGCCCTCGCTGCCGGAGCCGCCGGTGAAGAGGGAGGCCGGC
TCGGCCCGCCGCAACCCGCCGCCGTCCATCATCCCTACCGCTAATAGTGTCAGCAGTCAGGGGCTGGAGCACTAC
CAGGGCTGGCTGTTGCAGCCGTACGGCAGCACCAACGGCAAGCAGTCTGTGAGCGACGACCTGCCCTGA
Gene >Hirsu2|4443
ATGGCCACCCTCCGCCCCCCCCCCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGCAGCCGTCGTACGGGCCGCCGCAGCAGTA
CGGGCATCCGTACCAGGCCTCGCCCCAGCCGTCCGCCTGGAACCATCACGGCTCGCCGCAGCAGGGGCACTACGC
CTCCTCGGGCCGAGGCCGAGGCGGCTACGGCGACCGCGCCGGCTCCAAGCCTCCCCAGGTCGGCCAGGCCTTCGA
GCACGAGCCCCCAGTCGGCGGCTCCTACGGACAGCCATATCCTCACGACCCCCGTGCCCCCCCTCACTTCCCCCC
TCCCCAGTACGCCTACTCCGCTCCGCCCCCTCCTCCCGTCGCTCCCGTCCACCAAGAGGGCCACCATGGTCAGTA
TCATCGTCGTGGCCGCGGCGGCGGCCACCGAGACGGGGCGCGGGGGCGCAACGGCCACAGCCACACGCACAACCA
CAACCACGGCCACAACCACCACAACCACCACCACGGCGGAGACAAGGCCCGCCACCAGCAGCGGCAGAGCCACTC
GGCCGCCGAAGCCAAGGTCAAGACGGAGGTCAAGACGGAGGCCAAGATGGAGTCGCCGTCTGCCGGCAAGAAGAA
GAAGCGCAAGACCAACACGCTCGGCCTGACGCCCGGCATGGAGGAGTCGGAGTCGGACGACGACGACGGGGAAGA
GAAGGCTCTTGTCGCTCTCATCGGGTCCGAAATCATGCAGTGCGTTGCCCGCGGCCGACGCCCCACGCCCTCAGA
TTGCTGACGCCGACGCAGGATCACCGACGTCGCCGCCTTCCTGGCCGAGCGGCGGAAGAACTACCCCACGAGGGC
GCGCGTCGAGGCCCGCAAGGCTGCCGAGCTGGCACGGAAAGACGAGGACAAGGCTGCCTCGCTGGAGAAACAGGC
CGACCGGCTGAGGAGACAGCTCCGCAAAGTCGAGTCTTCCATCAAGCGAAAGCGAGAGCAGGGAGACGAGGGCGA
CGAGATGAGGGACTCGTCGGAAGAGTCGTCCGAGGACGAGAGACCCGAAGTCATGTCTTCTCGTCCGGACGCCGC
CGCGTCCCCCCGCGGCCAGGCAAGGAAGGCCGACGTGACGCGGCACTGCAAGTACTACTCCACCGGCGGCACGTG
CGGCAAGAAGGGCAAGTGCCGCTTCGTCCACGACCCGGAAGTTCGCGAGGCGGCCATCAAGGAGCGGGAAGCCAA
CGACGGCCGGATGACGATCCAGCAGCGTCTGATCCTCAACGACAAGGAACAGGAGGACCTGACGATCCTGCAGTC
GATCCAGTATCTGCGCGAAAAGGGGCTGATGACGTCGGTCCCCAAGCCGCAGGCCGGCCACGCCGACGGCGCCGT
CGACGGCAAGGACAGGCCCATGAAGAAGGAGAAGGCGGACAAGGCGGCCGTGGTGACGTCGAGCCTGCTGCCCGC
CGCGCCGCCCTCGCTGCCGGAGCCGCCGGTGAAGAGGGAGGCCGGCTCGGCCCGCCGCAACCCGCCGCCGTCCAT
CATCCCTACCGCTAATAGTGTCAGCAGTCAGGGGCTGGAGCACTACCAGGGCTGGCTGTTGCAGCCGTACGGCAG
CACCAACGGCAAGCAGTCTGTGAGCGACGACCTGCCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail