© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4439 |
| Gene name | |
| Location | Contig_226:27505..28813 |
| Strand | - |
| Gene length (bp) | 1308 |
| Transcript length (bp) | 1239 |
| Coding sequence length (bp) | 1239 |
| Protein length (aa) | 413 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01494 | FAD_binding_3 | FAD binding domain | 1.5E-14 | 21 | 242 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A6T923|HPXO_KLEP7 | FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hpxO PE=1 SV=1 | 20 | 253 | 2.0E-08 |
| sp|B6D1N4|HPXO_KLEPN | FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae GN=hpxO PE=3 SV=1 | 20 | 244 | 4.0E-08 |
| sp|B5B0J6|HPXO_KLEOX | FAD-dependent urate hydroxylase OS=Klebsiella oxytoca GN=hpxO PE=3 SV=1 | 20 | 253 | 7.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0071949 | FAD binding | Yes |
| GO:0036094 | small molecule binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0043168 | anion binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0050660 | flavin adenine dinucleotide binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:0043167 | ion binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 48 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 377 | 394 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4439 MLALERRELIQILYEELPDKSKVLLGRAVAGIRQSENGVEVELADGTSQRGDLVIGADGVHSIVREAMWQHADAA EPGLITDDERNIMMRNWVCLFGLGPGEPGLRNELSVTSYPGKRAAMTITQPRLTTFLFFWKAETATALSRPESAA RFTAQDADRAAAGVAHLPVNETMVFGDFWNKRTRAQLSHIEEGVLTRWHYGRLVLAGDAVHKVTPNTAYGGNLAI EGVAVLANQLHRAVVEQRRRREGSGRCDGDGDQEEKDEATPSWGAASLAQADLEAAFRAYQARHESRAREVCATA HWVTRLQTWDTPWLKFWSLYVMPLSDRKALARIIGALVRRAPLLDFVPLDRGPEGKVRWEHGETRSDDGYGKPWR GALAALAAVGLVASFAFFIRRWPLSGYTAREALSSDL* |
| Coding | >Hirsu2|4439 ATGCTGGCGCTCGAGCGGCGGGAGCTCATCCAGATCCTCTACGAGGAACTGCCCGACAAGTCCAAGGTGCTCCTG GGCCGAGCCGTCGCCGGCATCCGCCAGAGCGAGAACGGCGTCGAGGTCGAGCTGGCGGACGGCACGTCGCAGCGG GGCGACTTGGTCATCGGCGCCGACGGCGTCCACAGCATCGTCCGCGAAGCCATGTGGCAGCACGCCGACGCCGCC GAGCCGGGCCTCATCACCGACGACGAGCGGAACATCATGATGAGGAACTGGGTCTGTCTGTTCGGCCTCGGCCCC GGTGAGCCCGGCCTGCGCAACGAGCTCAGCGTGACGTCGTACCCGGGCAAACGCGCCGCCATGACCATCACCCAG CCCCGGCTCACCACCTTCCTCTTCTTCTGGAAGGCCGAGACGGCGACAGCGCTGTCGCGGCCCGAGAGCGCCGCG CGCTTCACGGCGCAGGACGCGGACCGCGCCGCCGCCGGCGTCGCCCACCTGCCCGTCAACGAGACCATGGTCTTC GGCGACTTCTGGAACAAGCGGACCCGGGCGCAGCTGTCGCACATCGAGGAGGGCGTCCTGACGCGCTGGCACTAC GGCCGCCTCGTCCTCGCCGGCGACGCCGTCCACAAGGTCACGCCCAACACCGCCTACGGCGGCAACCTGGCCATC GAGGGCGTCGCCGTCCTGGCCAACCAGCTGCACAGGGCCGTTGTCGAGCAGCGGCGCCGACGAGAGGGTTCAGGC CGGTGTGATGGAGACGGGGACCAAGAGGAAAAGGACGAGGCGACGCCGTCTTGGGGCGCCGCATCGCTCGCGCAG GCCGACCTCGAAGCGGCGTTCCGCGCCTACCAGGCACGGCACGAGTCGCGGGCGCGCGAGGTCTGCGCCACCGCC CACTGGGTCACCCGGCTGCAGACGTGGGACACGCCCTGGCTCAAGTTCTGGTCGCTGTACGTCATGCCGCTGTCG GACCGCAAGGCGCTGGCCCGCATCATCGGCGCCCTCGTCCGCCGCGCGCCGCTGCTCGACTTCGTGCCCCTGGAC CGCGGGCCCGAGGGCAAGGTGCGGTGGGAGCACGGCGAGACGAGAAGCGACGACGGCTACGGCAAGCCGTGGCGC GGCGCCCTGGCCGCGCTCGCTGCCGTCGGCTTGGTTGCTTCGTTTGCTTTCTTCATCCGGCGGTGGCCGTTGTCG GGTTATACCGCTCGCGAGGCGCTGTCGTCGGATCTCTAG |
| Transcript | >Hirsu2|4439 ATGCTGGCGCTCGAGCGGCGGGAGCTCATCCAGATCCTCTACGAGGAACTGCCCGACAAGTCCAAGGTGCTCCTG GGCCGAGCCGTCGCCGGCATCCGCCAGAGCGAGAACGGCGTCGAGGTCGAGCTGGCGGACGGCACGTCGCAGCGG GGCGACTTGGTCATCGGCGCCGACGGCGTCCACAGCATCGTCCGCGAAGCCATGTGGCAGCACGCCGACGCCGCC GAGCCGGGCCTCATCACCGACGACGAGCGGAACATCATGATGAGGAACTGGGTCTGTCTGTTCGGCCTCGGCCCC GGTGAGCCCGGCCTGCGCAACGAGCTCAGCGTGACGTCGTACCCGGGCAAACGCGCCGCCATGACCATCACCCAG CCCCGGCTCACCACCTTCCTCTTCTTCTGGAAGGCCGAGACGGCGACAGCGCTGTCGCGGCCCGAGAGCGCCGCG CGCTTCACGGCGCAGGACGCGGACCGCGCCGCCGCCGGCGTCGCCCACCTGCCCGTCAACGAGACCATGGTCTTC GGCGACTTCTGGAACAAGCGGACCCGGGCGCAGCTGTCGCACATCGAGGAGGGCGTCCTGACGCGCTGGCACTAC GGCCGCCTCGTCCTCGCCGGCGACGCCGTCCACAAGGTCACGCCCAACACCGCCTACGGCGGCAACCTGGCCATC GAGGGCGTCGCCGTCCTGGCCAACCAGCTGCACAGGGCCGTTGTCGAGCAGCGGCGCCGACGAGAGGGTTCAGGC CGGTGTGATGGAGACGGGGACCAAGAGGAAAAGGACGAGGCGACGCCGTCTTGGGGCGCCGCATCGCTCGCGCAG GCCGACCTCGAAGCGGCGTTCCGCGCCTACCAGGCACGGCACGAGTCGCGGGCGCGCGAGGTCTGCGCCACCGCC CACTGGGTCACCCGGCTGCAGACGTGGGACACGCCCTGGCTCAAGTTCTGGTCGCTGTACGTCATGCCGCTGTCG GACCGCAAGGCGCTGGCCCGCATCATCGGCGCCCTCGTCCGCCGCGCGCCGCTGCTCGACTTCGTGCCCCTGGAC CGCGGGCCCGAGGGCAAGGTGCGGTGGGAGCACGGCGAGACGAGAAGCGACGACGGCTACGGCAAGCCGTGGCGC GGCGCCCTGGCCGCGCTCGCTGCCGTCGGCTTGGTTGCTTCGTTTGCTTTCTTCATCCGGCGGTGGCCGTTGTCG GGTTATACCGCTCGCGAGGCGCTGTCGTCGGATCTCTAG |
| Gene | >Hirsu2|4439 ATGCTGGCGCTCGAGCGGCGGGAGCTCATCCAGATCCTCTACGAGGAACTGCCCGACAAGTCCAAGGTGCTCCTG GGCCGAGCCGTCGCCGGCATCCGCCAGAGCGAGAACGGCGTCGAGGTCGAGCTGGCGGACGGCACGTCGCAGCGG GGCGACTTGGTCATCGGCGCCGACGGCGTCCACAGCATCGTCCGCGAAGCCATGTGGCAGCACGCCGACGCCGCC GAGCCGGGCCTCATCACCGACGACGAGCGGAACAGTGAGCTCGCAGCCTCCCTGTTCCTCTCTCGATCTCGGTGA GAAGGCAACGGGCTAACGCACGGGTCAGTCATGATGAGGAACTGGGTCTGTCTGTTCGGCCTCGGCCCCGGTGAG CCCGGCCTGCGCAACGAGCTCAGCGTGACGTCGTACCCGGGCAAACGCGCCGCCATGACCATCACCCAGCCCCGG CTCACCACCTTCCTCTTCTTCTGGAAGGCCGAGACGGCGACAGCGCTGTCGCGGCCCGAGAGCGCCGCGCGCTTC ACGGCGCAGGACGCGGACCGCGCCGCCGCCGGCGTCGCCCACCTGCCCGTCAACGAGACCATGGTCTTCGGCGAC TTCTGGAACAAGCGGACCCGGGCGCAGCTGTCGCACATCGAGGAGGGCGTCCTGACGCGCTGGCACTACGGCCGC CTCGTCCTCGCCGGCGACGCCGTCCACAAGGTCACGCCCAACACCGCCTACGGCGGCAACCTGGCCATCGAGGGC GTCGCCGTCCTGGCCAACCAGCTGCACAGGGCCGTTGTCGAGCAGCGGCGCCGACGAGAGGGTTCAGGCCGGTGT GATGGAGACGGGGACCAAGAGGAAAAGGACGAGGCGACGCCGTCTTGGGGCGCCGCATCGCTCGCGCAGGCCGAC CTCGAAGCGGCGTTCCGCGCCTACCAGGCACGGCACGAGTCGCGGGCGCGCGAGGTCTGCGCCACCGCCCACTGG GTCACCCGGCTGCAGACGTGGGACACGCCCTGGCTCAAGTTCTGGTCGCTGTACGTCATGCCGCTGTCGGACCGC AAGGCGCTGGCCCGCATCATCGGCGCCCTCGTCCGCCGCGCGCCGCTGCTCGACTTCGTGCCCCTGGACCGCGGG CCCGAGGGCAAGGTGCGGTGGGAGCACGGCGAGACGAGAAGCGACGACGGCTACGGCAAGCCGTGGCGCGGCGCC CTGGCCGCGCTCGCTGCCGTCGGCTTGGTTGCTTCGTTTGCTTTCTTCATCCGGCGGTGGCCGTTGTCGGGTTAT ACCGCTCGCGAGGCGCTGTCGTCGGATCTCTAG |