© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4435 |
| Gene name | |
| Location | Contig_226:18443..20227 |
| Strand | - |
| Gene length (bp) | 1784 |
| Transcript length (bp) | 1320 |
| Coding sequence length (bp) | 1320 |
| Protein length (aa) | 440 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.7E-16 | 59 | 305 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q08280|BSC6_YEAST | Bypass of stop codon protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BSC6 PE=1 SV=1 | 3 | 437 | 2.0E-36 |
| sp|Q8YB48|GLUP_BRUME | Glucose/galactose transporter OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=gluP PE=3 SV=1 | 59 | 418 | 2.0E-06 |
| sp|P0C105|GLUP_BRUAB | Glucose/galactose transporter OS=Brucella abortus biovar 1 (strain 9-941) GN=gluP PE=3 SV=1 | 64 | 418 | 5.0E-06 |
| sp|Q2YIJ8|GLUP_BRUA2 | Glucose/galactose transporter OS=Brucella abortus (strain 2308) GN=gluP PE=3 SV=1 | 64 | 418 | 5.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 57 | 79 | 22 |
| 2 | 84 | 106 | 22 |
| 3 | 119 | 136 | 17 |
| 4 | 146 | 168 | 22 |
| 5 | 181 | 203 | 22 |
| 6 | 208 | 227 | 19 |
| 7 | 260 | 282 | 22 |
| 8 | 292 | 314 | 22 |
| 9 | 326 | 343 | 17 |
| 10 | 348 | 370 | 22 |
| 11 | 383 | 405 | 22 |
| 12 | 410 | 432 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4435 MSLSATATATASPDAAPASSASRLVEDGPGSDDGASVAQRPAERWNEPRANVGRLAFAFVSFIIAGMNDAAVGAL IPYLEEFYGLSYTVVSLIFLTPFAGYSVAAFTNARIHMRLGQRGVAVMAPLCHVATYAILAAHPPYPVLVVANAI SGFGNGLEDACFCAWVGAMDKGNSIQGLMHSCYSLGALFAPLIATSMVVQAGLPWYDFYFVMVGMAVLELVGLVV FFWDKTGAVYREEHAGEADSSGAGTREALKSRVTWLCALFFFAYMGAEVGLGGWIVTFMLRVRHASPIASGISGS GFWAGMALGRAGLGFVTERYGERLCISLYLAACLALELLFWLVPQFVVSAVAVALLGFFLGPMFPSAVMVTAKLL PRRIHVSAIGFAMAMGGTGGTVFPFIIGAIAASRGVAVLQPVVLALIVLILLVWLSFPRIQKKD* |
| Coding | >Hirsu2|4435 ATGTCCCTGTCGGCGACGGCGACGGCGACGGCCAGCCCGGACGCGGCGCCCGCGTCCTCGGCCTCGCGCCTGGTG GAGGACGGGCCGGGCTCGGACGATGGCGCGTCCGTGGCCCAGCGGCCGGCCGAGCGGTGGAACGAGCCGCGGGCC AACGTCGGCCGGCTGGCGTTTGCGTTTGTGTCGTTCATCATTGCCGGCATGAACGATGCCGCTGTCGGTGCCTTG ATCCCCTATCTGGAGGAGTTCTACGGACTCAGCTACACCGTCGTCTCGCTCATCTTCCTGACGCCCTTCGCCGGC TACTCGGTCGCCGCCTTCACCAACGCCCGCATCCACATGCGGCTCGGGCAGCGCGGCGTGGCCGTCATGGCGCCG CTGTGCCACGTCGCCACGTACGCCATCCTGGCCGCCCATCCGCCCTACCCGGTCCTGGTCGTGGCCAACGCCATC AGCGGCTTCGGCAACGGCCTCGAGGACGCCTGCTTCTGCGCCTGGGTCGGCGCCATGGACAAGGGAAACTCCATC CAGGGCCTGATGCACTCGTGCTACTCGCTCGGCGCCCTGTTCGCGCCGCTCATCGCCACCTCCATGGTCGTCCAG GCCGGGCTGCCGTGGTACGACTTTTACTTCGTCATGGTCGGCATGGCGGTCCTCGAGCTCGTCGGCCTCGTCGTC TTCTTCTGGGATAAGACCGGCGCCGTCTACCGGGAGGAACACGCCGGAGAGGCCGACTCGTCCGGCGCCGGGACG CGCGAGGCGCTCAAGTCGCGCGTCACCTGGCTGTGCGCCCTGTTCTTCTTTGCCTACATGGGTGCCGAAGTCGGC CTCGGAGGCTGGATCGTCACCTTCATGCTCCGCGTCCGGCACGCCTCGCCCATCGCCTCCGGCATCTCCGGCTCC GGCTTCTGGGCCGGCATGGCCCTGGGCCGGGCCGGGCTGGGCTTCGTGACGGAGCGCTACGGCGAGCGGCTCTGC ATCAGCCTCTACCTGGCCGCCTGCCTCGCGCTCGAGCTGCTCTTCTGGCTCGTGCCGCAGTTCGTCGTCTCCGCC GTCGCCGTCGCCCTGCTCGGCTTCTTCCTCGGGCCCATGTTCCCCAGCGCCGTCATGGTCACGGCCAAGCTGCTG CCGCGCCGCATCCACGTCAGCGCCATCGGCTTCGCCATGGCCATGGGCGGCACCGGCGGCACCGTCTTCCCCTTT ATCATCGGCGCCATCGCCGCCAGCAGGGGCGTCGCCGTGCTGCAGCCCGTCGTGCTCGCCCTCATCGTCCTCATC CTGCTCGTCTGGCTCAGCTTCCCGCGCATCCAGAAGAAGGACTGA |
| Transcript | >Hirsu2|4435 ATGTCCCTGTCGGCGACGGCGACGGCGACGGCCAGCCCGGACGCGGCGCCCGCGTCCTCGGCCTCGCGCCTGGTG GAGGACGGGCCGGGCTCGGACGATGGCGCGTCCGTGGCCCAGCGGCCGGCCGAGCGGTGGAACGAGCCGCGGGCC AACGTCGGCCGGCTGGCGTTTGCGTTTGTGTCGTTCATCATTGCCGGCATGAACGATGCCGCTGTCGGTGCCTTG ATCCCCTATCTGGAGGAGTTCTACGGACTCAGCTACACCGTCGTCTCGCTCATCTTCCTGACGCCCTTCGCCGGC TACTCGGTCGCCGCCTTCACCAACGCCCGCATCCACATGCGGCTCGGGCAGCGCGGCGTGGCCGTCATGGCGCCG CTGTGCCACGTCGCCACGTACGCCATCCTGGCCGCCCATCCGCCCTACCCGGTCCTGGTCGTGGCCAACGCCATC AGCGGCTTCGGCAACGGCCTCGAGGACGCCTGCTTCTGCGCCTGGGTCGGCGCCATGGACAAGGGAAACTCCATC CAGGGCCTGATGCACTCGTGCTACTCGCTCGGCGCCCTGTTCGCGCCGCTCATCGCCACCTCCATGGTCGTCCAG GCCGGGCTGCCGTGGTACGACTTTTACTTCGTCATGGTCGGCATGGCGGTCCTCGAGCTCGTCGGCCTCGTCGTC TTCTTCTGGGATAAGACCGGCGCCGTCTACCGGGAGGAACACGCCGGAGAGGCCGACTCGTCCGGCGCCGGGACG CGCGAGGCGCTCAAGTCGCGCGTCACCTGGCTGTGCGCCCTGTTCTTCTTTGCCTACATGGGTGCCGAAGTCGGC CTCGGAGGCTGGATCGTCACCTTCATGCTCCGCGTCCGGCACGCCTCGCCCATCGCCTCCGGCATCTCCGGCTCC GGCTTCTGGGCCGGCATGGCCCTGGGCCGGGCCGGGCTGGGCTTCGTGACGGAGCGCTACGGCGAGCGGCTCTGC ATCAGCCTCTACCTGGCCGCCTGCCTCGCGCTCGAGCTGCTCTTCTGGCTCGTGCCGCAGTTCGTCGTCTCCGCC GTCGCCGTCGCCCTGCTCGGCTTCTTCCTCGGGCCCATGTTCCCCAGCGCCGTCATGGTCACGGCCAAGCTGCTG CCGCGCCGCATCCACGTCAGCGCCATCGGCTTCGCCATGGCCATGGGCGGCACCGGCGGCACCGTCTTCCCCTTT ATCATCGGCGCCATCGCCGCCAGCAGGGGCGTCGCCGTGCTGCAGCCCGTCGTGCTCGCCCTCATCGTCCTCATC CTGCTCGTCTGGCTCAGCTTCCCGCGCATCCAGAAGAAGGACTGA |
| Gene | >Hirsu2|4435 ATGTCCCTGTCGGCGACGGCGACGGCGACGGCCAGCCCGGACGCGGCGCCCGCGTCCTCGGCCTCGCGCCTGGTG GAGGACGGGCCGGGCTCGGACGATGGCGCGTCCGTGGCCCAGCGGCCGGCCGAGCGGTGGAACGAGCCGCGGGCC AACGTCGGCCGGCTGGCGTTTGCGTTTGTGTCGTTCATCATTGCCGGCATGAACGATGCCGCTGTCGGTGTACGT CTGTGTCCCGTCGCTGCCGTGGGGCGGGATGAGCGCAGCGGTTTGGTGTTGTTGATAGATGTCGTCTCCCGGCTG ACCACTCCTTGCTTGACAGGCCTTGATCCCCTATGTACGTCGTCAACGGCTCTGGATCTCTCCGTCCGGCCCGGG GCAGTGACGCCATGTCCGCTCGGGGGCTTGCGAGCAACTGAAAGACTCAAACAGTCTGCGTCCAAGGTCTGATCC GCTGACGAGGAACGGGGGACTCGATAGCTGGAGGAGTTCTACGGACTCAGCTACACCGTCGTCTCGCTCATCTTC CTGACGCCCTTCGCCGGCTACTCGGTCGCCGCCTTCACCAACGCCCGCATCCACATGCGGCTCGGGCAGCGCGGC GTGGCCGTCATGGCGCCGCTGTGCCACGTCGCCACGTACGCCATCCTGGCCGCCCATCCGCCCTACCCGGTCCTG GTCGTGGCCAACGCCATCAGCGGCTTCGGCAACGGCCTCGAGGACGCCTGCTTCTGCGCCTGGGTCGGCGCCATG GACAAGGGAAACTCCATCCAGGGCCTGATGCACTCGTGCTACTCGCTCGGCGCCCTGTTCGCGCCGCTCATCGCC ACCTCCATGGTCGTCCAGGCCGGGCTGCCGTGGTACGACTTTTACTTCGTCATGGTGCGTCTGTCTACTCCTTGT CGTCTCGAATATCACCTCTTCACTCTCCGTCCGATGGCGGCCTTGGGTTCTGTTCTGACCGGGGCCCCGTTGCAT CCGCGCCTGTCTTGCAGGTCGGCATGGCGGTCCTCGAGCTCGTCGGCCTCGTCGTCTTCTTCTGGGATAAGACCG GCGCCGTCTACCGGGAGGAACACGCCGGAGAGGCCGACTCGTCCGGCGCCGGGACGCGCGAGGCGCTCAAGTCGC GCGTCACCTGGCTGTGCGCCCTGTTCTTCTTTGCCTACATGGGTGCCGAAGGTACGGTCGCGTCTCACCTCACTT GCTTCCATCTCTCTTCCCTGCGCCCCTTGAGCGGTTCTCGGTCAGCCTCGGTGCCCTCTCACGTCCCAATGCTGA CCCGCGCAGTCGGCCTCGGAGGCTGGATCGTCACCTTCATGCTCCGCGTCCGGCACGCCTCGCCCATCGCCTCCG GCATCTCCGGCTCCGGCTTCTGGGCCGGCATGGCCCTGGGCCGGGCCGGGCTGGGCTTCGTGACGGAGCGCTACG GCGAGCGGCTCTGCATCAGCCTCTACCTGGCCGCCTGCCTCGCGCTCGAGCTGCTCTTCTGGCTCGTGCCGCAGT TCGTCGTCTCCGCCGTCGCCGTCGCCCTGCTCGGCTTCTTCCTCGGGCCCATGTTCCCCAGCGCCGTCATGGTCA CGGCCAAGCTGCTGCCGCGCCGCATCCACGTCAGCGCCATCGGCTTCGCCATGGCCATGGGCGGCACCGGCGGCA CCGTCTTCCCCTTTATCATCGGCGCCATCGCCGCCAGCAGGGGCGTCGCCGTGCTGCAGCCCGTCGTGCTCGCCC TCATCGTCCTCATCCTGCTCGTCTGGCTCAGCTTCCCGCGCATCCAGAAGAAGGACTGA |