© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4415 |
| Gene name | |
| Location | Contig_2250:1249..2862 |
| Strand | - |
| Gene length (bp) | 1613 |
| Transcript length (bp) | 1413 |
| Coding sequence length (bp) | 1413 |
| Protein length (aa) | 471 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00002 | 7tm_2 | 7 transmembrane receptor (Secretin family) | 1.6E-11 | 13 | 200 |
| PF05462 | Dicty_CAR | Slime mold cyclic AMP receptor | 7.9E-12 | 16 | 182 |
| PF00001 | 7tm_1 | 7 transmembrane receptor (rhodopsin family) | 2.8E-10 | 28 | 375 |
| PF11710 | Git3 | G protein-coupled glucose receptor regulating Gpa2 | 2.5E-05 | 15 | 187 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O04714|GCR1_ARATH | G-protein coupled receptor 1 OS=Arabidopsis thaliana GN=GCR1 PE=1 SV=1 | 4 | 198 | 9.0E-08 |
| sp|Q60755|CALCR_MOUSE | Calcitonin receptor OS=Mus musculus GN=Calcr PE=2 SV=2 | 73 | 204 | 3.0E-07 |
| sp|P34907|CAR2_DICDI | Cyclic AMP receptor 2 OS=Dictyostelium discoideum GN=carB PE=2 SV=2 | 23 | 173 | 8.0E-07 |
| sp|Q54U75|CRLA_DICDI | Cyclic AMP receptor-like protein A OS=Dictyostelium discoideum GN=crlA PE=2 SV=1 | 2 | 186 | 7.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004930 | G protein-coupled receptor activity | Yes |
| GO:0007186 | G protein-coupled receptor signaling pathway | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0060089 | molecular transducer activity | No |
| GO:0038023 | signaling receptor activity | No |
| GO:0050789 | regulation of biological process | No |
| GO:0009987 | cellular process | No |
| GO:0007165 | signal transduction | No |
| GO:0005575 | cellular_component | No |
| GO:0065007 | biological regulation | No |
| GO:0008150 | biological_process | No |
| GO:0003674 | molecular_function | No |
| GO:0004888 | transmembrane signaling receptor activity | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 38 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 47 | 69 | 22 |
| 3 | 84 | 106 | 22 |
| 4 | 118 | 140 | 22 |
| 5 | 164 | 186 | 22 |
| 6 | 319 | 341 | 22 |
| 7 | 356 | 378 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4415 MHELTLEQRNAISVIERACSVLSLLGCIFTIVTFCSSRAFHKPINRLVFYASFGNMMTNVGTLMSRAYLPELDSF GCQFQSFLIQMFMPADAFWTLAMAINVYLTFYRKFDAERLRRMELAYLLGCYGIPFIPAFTFIFIRNQQGQRLYG NATLWCWISPEFDILRIASFYGPVWVTILITFFIYIRAGRTIYEKRKQLHDFQSSDPDPLSVNGEAVTTIKRTEV TVTTEVADESGAIRLGPMGRRQDSPPSDSSVGAYSVHISADHFGGPGAAGPGAADGTASAPAQTRTMQQTSTIQV TPQRPPNPARRRHHELNNAAWSYTKCAILFFTAILITWIPSSANRVYSVVHQNEVFAPLEFMSAFVLPLQGFWNA VIYAVTSWGACKNLLHDWRIGRPSPVTEITGLDPHSASAAEQGVAAGGRRGEQHHRHHQHRQFRSPTRSSRTFDS ESMTELAKSRTGSADGSHSC* |
| Coding | >Hirsu2|4415 ATGCATGAGTTGACGTTGGAGCAGCGCAACGCCATCAGCGTTATTGAGCGGGCGTGCTCAGTTTTGTCGCTTTTG GGATGCATCTTCACCATCGTCACCTTTTGCTCCTCTCGAGCCTTCCACAAGCCCATCAACCGGCTCGTCTTCTAC GCCTCTTTCGGCAACATGATGACCAACGTCGGCACCCTCATGTCCCGGGCGTACCTCCCCGAGCTGGACTCATTC GGCTGCCAGTTCCAGTCCTTCCTGATCCAGATGTTCATGCCGGCAGATGCCTTCTGGACGCTGGCCATGGCCATC AACGTGTATCTGACCTTTTACCGCAAGTTTGACGCGGAGCGGCTGCGGCGAATGGAGCTGGCCTATCTGCTTGGC TGCTACGGCATCCCCTTCATCCCCGCCTTCACCTTCATCTTCATCCGGAACCAGCAGGGCCAGCGGCTCTACGGC AACGCCACCCTGTGGTGCTGGATCTCGCCCGAGTTCGACATCCTGCGGATCGCCAGCTTTTACGGCCCAGTCTGG GTCACGATCCTCATCACCTTCTTCATCTACATCCGCGCTGGCCGCACCATCTACGAAAAGCGCAAGCAGCTGCAC GACTTCCAGTCATCGGACCCCGATCCCCTGTCCGTCAACGGCGAGGCGGTGACGACGATCAAAAGGACGGAGGTG ACGGTGACGACGGAGGTAGCGGACGAGTCCGGGGCGATCCGGCTGGGCCCGATGGGGAGGCGGCAAGACTCGCCG CCGTCGGACAGCTCGGTCGGGGCCTACTCAGTTCACATCTCGGCCGACCACTTCGGCGGGCCCGGAGCGGCGGGC CCGGGGGCGGCAGACGGAACGGCCTCGGCGCCGGCGCAGACGCGGACGATGCAACAGACGAGCACAATCCAGGTG ACGCCGCAGCGGCCGCCGAACCCGGCGCGGCGGCGGCACCACGAGCTCAACAACGCGGCGTGGTCCTACACCAAG TGCGCCATCCTCTTCTTCACCGCCATCCTCATCACGTGGATCCCGTCGAGCGCCAACCGGGTGTACTCGGTCGTG CACCAGAATGAGGTGTTCGCGCCGCTCGAGTTCATGAGCGCCTTCGTCCTGCCGCTGCAGGGCTTCTGGAACGCC GTCATCTACGCCGTCACGTCGTGGGGCGCCTGCAAGAACCTGCTGCACGACTGGCGCATCGGCCGGCCGTCGCCC GTGACGGAGATCACCGGCCTGGACCCGCACTCGGCCTCGGCGGCGGAGCAGGGCGTGGCGGCCGGGGGCCGCCGG GGCGAACAGCACCACCGGCACCATCAACACCGACAGTTCCGCTCCCCGACCCGGAGCTCGCGCACCTTCGACTCG GAGAGCATGACGGAGCTGGCCAAATCGCGCACCGGCTCGGCCGACGGCAGCCACAGCTGCTGA |
| Transcript | >Hirsu2|4415 ATGCATGAGTTGACGTTGGAGCAGCGCAACGCCATCAGCGTTATTGAGCGGGCGTGCTCAGTTTTGTCGCTTTTG GGATGCATCTTCACCATCGTCACCTTTTGCTCCTCTCGAGCCTTCCACAAGCCCATCAACCGGCTCGTCTTCTAC GCCTCTTTCGGCAACATGATGACCAACGTCGGCACCCTCATGTCCCGGGCGTACCTCCCCGAGCTGGACTCATTC GGCTGCCAGTTCCAGTCCTTCCTGATCCAGATGTTCATGCCGGCAGATGCCTTCTGGACGCTGGCCATGGCCATC AACGTGTATCTGACCTTTTACCGCAAGTTTGACGCGGAGCGGCTGCGGCGAATGGAGCTGGCCTATCTGCTTGGC TGCTACGGCATCCCCTTCATCCCCGCCTTCACCTTCATCTTCATCCGGAACCAGCAGGGCCAGCGGCTCTACGGC AACGCCACCCTGTGGTGCTGGATCTCGCCCGAGTTCGACATCCTGCGGATCGCCAGCTTTTACGGCCCAGTCTGG GTCACGATCCTCATCACCTTCTTCATCTACATCCGCGCTGGCCGCACCATCTACGAAAAGCGCAAGCAGCTGCAC GACTTCCAGTCATCGGACCCCGATCCCCTGTCCGTCAACGGCGAGGCGGTGACGACGATCAAAAGGACGGAGGTG ACGGTGACGACGGAGGTAGCGGACGAGTCCGGGGCGATCCGGCTGGGCCCGATGGGGAGGCGGCAAGACTCGCCG CCGTCGGACAGCTCGGTCGGGGCCTACTCAGTTCACATCTCGGCCGACCACTTCGGCGGGCCCGGAGCGGCGGGC CCGGGGGCGGCAGACGGAACGGCCTCGGCGCCGGCGCAGACGCGGACGATGCAACAGACGAGCACAATCCAGGTG ACGCCGCAGCGGCCGCCGAACCCGGCGCGGCGGCGGCACCACGAGCTCAACAACGCGGCGTGGTCCTACACCAAG TGCGCCATCCTCTTCTTCACCGCCATCCTCATCACGTGGATCCCGTCGAGCGCCAACCGGGTGTACTCGGTCGTG CACCAGAATGAGGTGTTCGCGCCGCTCGAGTTCATGAGCGCCTTCGTCCTGCCGCTGCAGGGCTTCTGGAACGCC GTCATCTACGCCGTCACGTCGTGGGGCGCCTGCAAGAACCTGCTGCACGACTGGCGCATCGGCCGGCCGTCGCCC GTGACGGAGATCACCGGCCTGGACCCGCACTCGGCCTCGGCGGCGGAGCAGGGCGTGGCGGCCGGGGGCCGCCGG GGCGAACAGCACCACCGGCACCATCAACACCGACAGTTCCGCTCCCCGACCCGGAGCTCGCGCACCTTCGACTCG GAGAGCATGACGGAGCTGGCCAAATCGCGCACCGGCTCGGCCGACGGCAGCCACAGCTGCTGA |
| Gene | >Hirsu2|4415 ATGCATGAGTTGACGTTGGAGCAGCGCAACGCCATCAGCGTTATTGAGCGGGCGTGCTCAGTTTTGTCGCTTTTG GGATGCATCTTCACCATCGTCACCTTTTGCTCCTCTCGAGCCTTCCACAAGCCCATCAACCGGCTCGTCTTCTAC GCCTCTTTCGGCAACATGATGACCAACGTCGGCACCCTCATGTCCCGGGCGTACCTCCCCGAGCTGGACTCATTC GGCTGCCAGTTCCAGTCCTTCCTGATCCAGATGTACGTGAGCTCACTCTCTTCACTCTCTCACCGGTCTCCTTGC TTTCACCCCGTACCGTACCGCCTCCGTATACAGTCTCAACGCGGCCCGGAGACAGTGACTGACCCGTACGTCTCG CAGGTTCATGCCGGCAGATGCCTTCTGGACGCTGGCCATGGCCATCAACGTGTATCTGACCTTTTACCGCAAGTT TGACGCGGAGCGGCTGCGGCGAATGGAGCTGGCCTATCTGCTTGGCTGCTACGGCATCCCCTTCATCCCCGCCTT CACCTTCATCTTCATCCGGAACCAGCAGGGCCAGCGGCTCTACGGCAACGCCACCCTGTGGTGCTGGATCTCGCC CGAGTTCGACATCCTGCGGATCGCCAGCTTTTACGGCCCAGTCTGGTGAGTGAACCCGAGATGGAATGGGGAGAG GATGGCGGCGAGGATTGGGGGGCTGACAGTCGGGGACGGGAGTAAACAGGGTCACGATCCTCATCACCTTCTTCA TCTACATCCGCGCTGGCCGCACCATCTACGAAAAGCGCAAGCAGCTGCACGACTTCCAGTCATCGGACCCCGATC CCCTGTCCGTCAACGGCGAGGCGGTGACGACGATCAAAAGGACGGAGGTGACGGTGACGACGGAGGTAGCGGACG AGTCCGGGGCGATCCGGCTGGGCCCGATGGGGAGGCGGCAAGACTCGCCGCCGTCGGACAGCTCGGTCGGGGCCT ACTCAGTTCACATCTCGGCCGACCACTTCGGCGGGCCCGGAGCGGCGGGCCCGGGGGCGGCAGACGGAACGGCCT CGGCGCCGGCGCAGACGCGGACGATGCAACAGACGAGCACAATCCAGGTGACGCCGCAGCGGCCGCCGAACCCGG CGCGGCGGCGGCACCACGAGCTCAACAACGCGGCGTGGTCCTACACCAAGTGCGCCATCCTCTTCTTCACCGCCA TCCTCATCACGTGGATCCCGTCGAGCGCCAACCGGGTGTACTCGGTCGTGCACCAGAATGAGGTGTTCGCGCCGC TCGAGTTCATGAGCGCCTTCGTCCTGCCGCTGCAGGGCTTCTGGAACGCCGTCATCTACGCCGTCACGTCGTGGG GCGCCTGCAAGAACCTGCTGCACGACTGGCGCATCGGCCGGCCGTCGCCCGTGACGGAGATCACCGGCCTGGACC CGCACTCGGCCTCGGCGGCGGAGCAGGGCGTGGCGGCCGGGGGCCGCCGGGGCGAACAGCACCACCGGCACCATC AACACCGACAGTTCCGCTCCCCGACCCGGAGCTCGCGCACCTTCGACTCGGAGAGCATGACGGAGCTGGCCAAAT CGCGCACCGGCTCGGCCGACGGCAGCCACAGCTGCTGA |