Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4415
Gene name
LocationContig_2250:1249..2862
Strand-
Gene length (bp)1613
Transcript length (bp)1413
Coding sequence length (bp)1413
Protein length (aa) 471

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05462 Dicty_CAR Slime mold cyclic AMP receptor 7.2E-12 16 182
PF00002 7tm_2 7 transmembrane receptor (Secretin family) 2.0E-11 13 200
PF00001 7tm_1 7 transmembrane receptor (rhodopsin family) 3.8E-10 28 358
PF11710 Git3 G protein-coupled glucose receptor regulating Gpa2 2.3E-05 15 187

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O04714|GCR1_ARATH G-protein coupled receptor 1 OS=Arabidopsis thaliana GN=GCR1 PE=1 SV=1 4 198 9.0E-08
sp|Q60755|CALCR_MOUSE Calcitonin receptor OS=Mus musculus GN=Calcr PE=2 SV=2 73 204 3.0E-07
sp|P34907|CAR2_DICDI Cyclic AMP receptor 2 OS=Dictyostelium discoideum GN=carB PE=2 SV=2 23 173 8.0E-07
sp|Q54U75|CRLA_DICDI Cyclic AMP receptor-like protein A OS=Dictyostelium discoideum GN=crlA PE=2 SV=1 2 186 7.0E-06

GO

GO Term Description Terminal node
GO:0004930 G protein-coupled receptor activity Yes
GO:0016021 integral component of membrane Yes
GO:0007186 G protein-coupled receptor signaling pathway Yes
GO:0007165 signal transduction No
GO:0005575 cellular_component No
GO:0009987 cellular process No
GO:0050789 regulation of biological process No
GO:0031224 intrinsic component of membrane No
GO:0008150 biological_process No
GO:0065007 biological regulation No
GO:0038023 signaling receptor activity No
GO:0004888 transmembrane signaling receptor activity No
GO:0003674 molecular_function No
GO:0060089 molecular transducer activity No
GO:0044425 membrane part No
GO:0050794 regulation of cellular process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22
2 47 69 22
3 84 106 22
4 118 140 22
5 164 186 22
6 319 341 22
7 356 378 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4415
MHELTLEQRNAISVIERACSVLSLLGCIFTIVTFCSSRAFHKPINRLVFYASFGNMMTNVGTLMSRAYLPELDSF
GCQFQSFLIQMFMPADAFWTLAMAINVYLTFYRKFDAERLRRMELAYLLGCYGIPFIPAFTFIFIRNQQGQRLYG
NATLWCWISPEFDILRIASFYGPVWVTILITFFIYIRAGRTIYEKRKQLHDFQSSDPDPLSVNGEAVTTIKRTEV
TVTTEVADESGAIRLGPMGRRQDSPPSDSSVGAYSVHISADHFGGPGAAGPGAADGTASAPAQTRTMQQTSTIQV
TPQRPPNPARRRHHELNNAAWSYTKCAILFFTAILITWIPSSANRVYSVVHQNEVFAPLEFMSAFVLPLQGFWNA
VIYAVTSWGACKNLLHDWRIGRPSPVTEITGLDPHSASAAEQGVAAGGRRGEQHHRHHQHRQFRSPTRSSRTFDS
ESMTELAKSRTGSADGSHSC*
Coding >Hirsu2|4415
ATGCATGAGTTGACGTTGGAGCAGCGCAACGCCATCAGCGTTATTGAGCGGGCGTGCTCAGTTTTGTCGCTTTTG
GGATGCATCTTCACCATCGTCACCTTTTGCTCCTCTCGAGCCTTCCACAAGCCCATCAACCGGCTCGTCTTCTAC
GCCTCTTTCGGCAACATGATGACCAACGTCGGCACCCTCATGTCCCGGGCGTACCTCCCCGAGCTGGACTCATTC
GGCTGCCAGTTCCAGTCCTTCCTGATCCAGATGTTCATGCCGGCAGATGCCTTCTGGACGCTGGCCATGGCCATC
AACGTGTATCTGACCTTTTACCGCAAGTTTGACGCGGAGCGGCTGCGGCGAATGGAGCTGGCCTATCTGCTTGGC
TGCTACGGCATCCCCTTCATCCCCGCCTTCACCTTCATCTTCATCCGGAACCAGCAGGGCCAGCGGCTCTACGGC
AACGCCACCCTGTGGTGCTGGATCTCGCCCGAGTTCGACATCCTGCGGATCGCCAGCTTTTACGGCCCAGTCTGG
GTCACGATCCTCATCACCTTCTTCATCTACATCCGCGCTGGCCGCACCATCTACGAAAAGCGCAAGCAGCTGCAC
GACTTCCAGTCATCGGACCCCGATCCCCTGTCCGTCAACGGCGAGGCGGTGACGACGATCAAAAGGACGGAGGTG
ACGGTGACGACGGAGGTAGCGGACGAGTCCGGGGCGATCCGGCTGGGCCCGATGGGGAGGCGGCAAGACTCGCCG
CCGTCGGACAGCTCGGTCGGGGCCTACTCAGTTCACATCTCGGCCGACCACTTCGGCGGGCCCGGAGCGGCGGGC
CCGGGGGCGGCAGACGGAACGGCCTCGGCGCCGGCGCAGACGCGGACGATGCAACAGACGAGCACAATCCAGGTG
ACGCCGCAGCGGCCGCCGAACCCGGCGCGGCGGCGGCACCACGAGCTCAACAACGCGGCGTGGTCCTACACCAAG
TGCGCCATCCTCTTCTTCACCGCCATCCTCATCACGTGGATCCCGTCGAGCGCCAACCGGGTGTACTCGGTCGTG
CACCAGAATGAGGTGTTCGCGCCGCTCGAGTTCATGAGCGCCTTCGTCCTGCCGCTGCAGGGCTTCTGGAACGCC
GTCATCTACGCCGTCACGTCGTGGGGCGCCTGCAAGAACCTGCTGCACGACTGGCGCATCGGCCGGCCGTCGCCC
GTGACGGAGATCACCGGCCTGGACCCGCACTCGGCCTCGGCGGCGGAGCAGGGCGTGGCGGCCGGGGGCCGCCGG
GGCGAACAGCACCACCGGCACCATCAACACCGACAGTTCCGCTCCCCGACCCGGAGCTCGCGCACCTTCGACTCG
GAGAGCATGACGGAGCTGGCCAAATCGCGCACCGGCTCGGCCGACGGCAGCCACAGCTGCTGA
Transcript >Hirsu2|4415
ATGCATGAGTTGACGTTGGAGCAGCGCAACGCCATCAGCGTTATTGAGCGGGCGTGCTCAGTTTTGTCGCTTTTG
GGATGCATCTTCACCATCGTCACCTTTTGCTCCTCTCGAGCCTTCCACAAGCCCATCAACCGGCTCGTCTTCTAC
GCCTCTTTCGGCAACATGATGACCAACGTCGGCACCCTCATGTCCCGGGCGTACCTCCCCGAGCTGGACTCATTC
GGCTGCCAGTTCCAGTCCTTCCTGATCCAGATGTTCATGCCGGCAGATGCCTTCTGGACGCTGGCCATGGCCATC
AACGTGTATCTGACCTTTTACCGCAAGTTTGACGCGGAGCGGCTGCGGCGAATGGAGCTGGCCTATCTGCTTGGC
TGCTACGGCATCCCCTTCATCCCCGCCTTCACCTTCATCTTCATCCGGAACCAGCAGGGCCAGCGGCTCTACGGC
AACGCCACCCTGTGGTGCTGGATCTCGCCCGAGTTCGACATCCTGCGGATCGCCAGCTTTTACGGCCCAGTCTGG
GTCACGATCCTCATCACCTTCTTCATCTACATCCGCGCTGGCCGCACCATCTACGAAAAGCGCAAGCAGCTGCAC
GACTTCCAGTCATCGGACCCCGATCCCCTGTCCGTCAACGGCGAGGCGGTGACGACGATCAAAAGGACGGAGGTG
ACGGTGACGACGGAGGTAGCGGACGAGTCCGGGGCGATCCGGCTGGGCCCGATGGGGAGGCGGCAAGACTCGCCG
CCGTCGGACAGCTCGGTCGGGGCCTACTCAGTTCACATCTCGGCCGACCACTTCGGCGGGCCCGGAGCGGCGGGC
CCGGGGGCGGCAGACGGAACGGCCTCGGCGCCGGCGCAGACGCGGACGATGCAACAGACGAGCACAATCCAGGTG
ACGCCGCAGCGGCCGCCGAACCCGGCGCGGCGGCGGCACCACGAGCTCAACAACGCGGCGTGGTCCTACACCAAG
TGCGCCATCCTCTTCTTCACCGCCATCCTCATCACGTGGATCCCGTCGAGCGCCAACCGGGTGTACTCGGTCGTG
CACCAGAATGAGGTGTTCGCGCCGCTCGAGTTCATGAGCGCCTTCGTCCTGCCGCTGCAGGGCTTCTGGAACGCC
GTCATCTACGCCGTCACGTCGTGGGGCGCCTGCAAGAACCTGCTGCACGACTGGCGCATCGGCCGGCCGTCGCCC
GTGACGGAGATCACCGGCCTGGACCCGCACTCGGCCTCGGCGGCGGAGCAGGGCGTGGCGGCCGGGGGCCGCCGG
GGCGAACAGCACCACCGGCACCATCAACACCGACAGTTCCGCTCCCCGACCCGGAGCTCGCGCACCTTCGACTCG
GAGAGCATGACGGAGCTGGCCAAATCGCGCACCGGCTCGGCCGACGGCAGCCACAGCTGCTGA
Gene >Hirsu2|4415
ATGCATGAGTTGACGTTGGAGCAGCGCAACGCCATCAGCGTTATTGAGCGGGCGTGCTCAGTTTTGTCGCTTTTG
GGATGCATCTTCACCATCGTCACCTTTTGCTCCTCTCGAGCCTTCCACAAGCCCATCAACCGGCTCGTCTTCTAC
GCCTCTTTCGGCAACATGATGACCAACGTCGGCACCCTCATGTCCCGGGCGTACCTCCCCGAGCTGGACTCATTC
GGCTGCCAGTTCCAGTCCTTCCTGATCCAGATGTACGTGAGCTCACTCTCTTCACTCTCTCACCGGTCTCCTTGC
TTTCACCCCGTACCGTACCGCCTCCGTATACAGTCTCAACGCGGCCCGGAGACAGTGACTGACCCGTACGTCTCG
CAGGTTCATGCCGGCAGATGCCTTCTGGACGCTGGCCATGGCCATCAACGTGTATCTGACCTTTTACCGCAAGTT
TGACGCGGAGCGGCTGCGGCGAATGGAGCTGGCCTATCTGCTTGGCTGCTACGGCATCCCCTTCATCCCCGCCTT
CACCTTCATCTTCATCCGGAACCAGCAGGGCCAGCGGCTCTACGGCAACGCCACCCTGTGGTGCTGGATCTCGCC
CGAGTTCGACATCCTGCGGATCGCCAGCTTTTACGGCCCAGTCTGGTGAGTGAACCCGAGATGGAATGGGGAGAG
GATGGCGGCGAGGATTGGGGGGCTGACAGTCGGGGACGGGAGTAAACAGGGTCACGATCCTCATCACCTTCTTCA
TCTACATCCGCGCTGGCCGCACCATCTACGAAAAGCGCAAGCAGCTGCACGACTTCCAGTCATCGGACCCCGATC
CCCTGTCCGTCAACGGCGAGGCGGTGACGACGATCAAAAGGACGGAGGTGACGGTGACGACGGAGGTAGCGGACG
AGTCCGGGGCGATCCGGCTGGGCCCGATGGGGAGGCGGCAAGACTCGCCGCCGTCGGACAGCTCGGTCGGGGCCT
ACTCAGTTCACATCTCGGCCGACCACTTCGGCGGGCCCGGAGCGGCGGGCCCGGGGGCGGCAGACGGAACGGCCT
CGGCGCCGGCGCAGACGCGGACGATGCAACAGACGAGCACAATCCAGGTGACGCCGCAGCGGCCGCCGAACCCGG
CGCGGCGGCGGCACCACGAGCTCAACAACGCGGCGTGGTCCTACACCAAGTGCGCCATCCTCTTCTTCACCGCCA
TCCTCATCACGTGGATCCCGTCGAGCGCCAACCGGGTGTACTCGGTCGTGCACCAGAATGAGGTGTTCGCGCCGC
TCGAGTTCATGAGCGCCTTCGTCCTGCCGCTGCAGGGCTTCTGGAACGCCGTCATCTACGCCGTCACGTCGTGGG
GCGCCTGCAAGAACCTGCTGCACGACTGGCGCATCGGCCGGCCGTCGCCCGTGACGGAGATCACCGGCCTGGACC
CGCACTCGGCCTCGGCGGCGGAGCAGGGCGTGGCGGCCGGGGGCCGCCGGGGCGAACAGCACCACCGGCACCATC
AACACCGACAGTTCCGCTCCCCGACCCGGAGCTCGCGCACCTTCGACTCGGAGAGCATGACGGAGCTGGCCAAAT
CGCGCACCGGCTCGGCCGACGGCAGCCACAGCTGCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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