Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4407
Gene name
LocationContig_225:1806..2726
Strand-
Gene length (bp)920
Transcript length (bp)819
Coding sequence length (bp)819
Protein length (aa) 273

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.5

Transmembrane Domains

Domain # Start End Length
1 24 46 22
2 88 110 22
3 123 145 22
4 179 201 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4407
MKLLLGKNRTYRLIPRTWPRTHNLAVGWLMPIELVVLVPLLVIFGIAQPDMYRTAMWRIGFENKLNSNPDMILYA
YANYRPLPDVPFIWSSSLTNFNVAISIVSLFFLLVKLICFIMTAWYPIFAVLVNLALVVLYAVSVYGQVGPDYAD
PRYPAPAAWYFRQGCDLAKRYGKYGPCQIAQSSLAITLLMLVVYLVNLAYALHAMWPNKENEVSDEEDGSSATSD
PKERSTWEMHSMKSPISVHAMPYTPRTQAFHTLDRQLPLRQPDRRLA*
Coding >Hirsu2|4407
ATGAAGCTTTTGCTCGGCAAGAACCGGACCTACCGGCTCATTCCTCGCACATGGCCCCGGACGCACAACTTGGCC
GTCGGCTGGCTCATGCCCATCGAGCTCGTCGTCCTCGTCCCCCTGCTCGTCATCTTCGGCATCGCCCAGCCTGAC
ATGTACCGCACGGCGATGTGGCGCATCGGCTTCGAGAACAAGCTCAACTCCAATCCCGACATGATCCTCTACGCC
TACGCCAACTATCGTCCCCTCCCCGACGTGCCCTTCATCTGGTCGTCCAGCCTCACCAACTTCAACGTCGCCATC
TCCATCGTCTCCCTCTTCTTCCTCCTCGTCAAGCTCATCTGCTTCATCATGACGGCCTGGTACCCCATCTTTGCC
GTCCTCGTCAACCTGGCCCTCGTCGTCCTCTACGCCGTCAGCGTCTACGGCCAGGTCGGGCCCGACTACGCCGAC
CCCCGATACCCAGCCCCGGCCGCCTGGTACTTCCGCCAGGGTTGCGACCTGGCCAAGCGCTACGGCAAGTACGGG
CCTTGCCAGATTGCCCAGAGCTCGCTGGCCATCACCCTGCTCATGCTCGTCGTCTACCTGGTCAACCTGGCCTAC
GCCCTGCATGCCATGTGGCCCAACAAGGAGAACGAGGTGAGCGACGAGGAGGACGGCAGCTCGGCCACGTCGGAC
CCCAAGGAGAGAAGCACGTGGGAGATGCACAGCATGAAGTCGCCCATCAGCGTCCACGCCATGCCGTATACGCCC
AGGACGCAGGCCTTTCACACCCTGGACCGACAGTTGCCGCTGCGGCAACCGGACCGGAGGCTCGCGTAG
Transcript >Hirsu2|4407
ATGAAGCTTTTGCTCGGCAAGAACCGGACCTACCGGCTCATTCCTCGCACATGGCCCCGGACGCACAACTTGGCC
GTCGGCTGGCTCATGCCCATCGAGCTCGTCGTCCTCGTCCCCCTGCTCGTCATCTTCGGCATCGCCCAGCCTGAC
ATGTACCGCACGGCGATGTGGCGCATCGGCTTCGAGAACAAGCTCAACTCCAATCCCGACATGATCCTCTACGCC
TACGCCAACTATCGTCCCCTCCCCGACGTGCCCTTCATCTGGTCGTCCAGCCTCACCAACTTCAACGTCGCCATC
TCCATCGTCTCCCTCTTCTTCCTCCTCGTCAAGCTCATCTGCTTCATCATGACGGCCTGGTACCCCATCTTTGCC
GTCCTCGTCAACCTGGCCCTCGTCGTCCTCTACGCCGTCAGCGTCTACGGCCAGGTCGGGCCCGACTACGCCGAC
CCCCGATACCCAGCCCCGGCCGCCTGGTACTTCCGCCAGGGTTGCGACCTGGCCAAGCGCTACGGCAAGTACGGG
CCTTGCCAGATTGCCCAGAGCTCGCTGGCCATCACCCTGCTCATGCTCGTCGTCTACCTGGTCAACCTGGCCTAC
GCCCTGCATGCCATGTGGCCCAACAAGGAGAACGAGGTGAGCGACGAGGAGGACGGCAGCTCGGCCACGTCGGAC
CCCAAGGAGAGAAGCACGTGGGAGATGCACAGCATGAAGTCGCCCATCAGCGTCCACGCCATGCCGTATACGCCC
AGGACGCAGGCCTTTCACACCCTGGACCGACAGTTGCCGCTGCGGCAACCGGACCGGAGGCTCGCGTAG
Gene >Hirsu2|4407
ATGAAGCTTTTGCTCGGCAAGAACCGGACCTACCGGCTCATTCCTCGCACATGGCCCCGGACGCACAACTTGGCC
GTCGGCTGGCTCATGCCCATCGAGCTCGTCGTCCTCGTCCCCCTGCTCGTCATCTTCGGCATCGCCCAGCCTGAC
ATGTACCGCACGGCGATGTGGCGCATCGGCTTCGAGAACAAGCTCAACTCCAATCCCGACATGATCCTCTACGCC
TACGCCAACTATCGTCCCCTCCCCGACGTGCCCTTCATCTGGTCGTCCAGGTGAGTCTTGTTCGCGTCTTGATGC
CGCGGGCGCTAACGACGGACCAGCCTCACCAACTTCAACGTCGCCATCTCCATCGTCTCCCTCTTCTTCCTCCTC
GTCAAGCTCATCTGCTTCATCATGACGGCCTGGTACCCCATCTTTGCCGTCCTCGTCAACCTGGCCCTCGTCGTC
CTCTACGCCGTCAGCGTCTACGGCCAGGTCGGGCCCGACTACGCCGACCCCCGATACCCAGCCCCGGCCGCCTGG
TACTTCCGCCAGGGTTGCGACCTGGCCAAGCGCTACGGCAAGTACGGGCCTTGCCAGATTGCCCAGAGCTCGCTG
GCCATCACCCTGCTCATGCTGTAAGTACGGTCCCTCGAGACGGCGGTGCCGTGACTGACGGCCTCGCCTCCAGCG
TCGTCTACCTGGTCAACCTGGCCTACGCCCTGCATGCCATGTGGCCCAACAAGGAGAACGAGGTGAGCGACGAGG
AGGACGGCAGCTCGGCCACGTCGGACCCCAAGGAGAGAAGCACGTGGGAGATGCACAGCATGAAGTCGCCCATCA
GCGTCCACGCCATGCCGTATACGCCCAGGACGCAGGCCTTTCACACCCTGGACCGACAGTTGCCGCTGCGGCAAC
CGGACCGGAGGCTCGCGTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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