Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|4399
Gene name
Location	Contig_2243:1762..3211
Strand	-
Gene length (bp)	1449
Transcript length (bp)	1449
Coding sequence length (bp)	1449
Protein length (aa)	483

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05686	Glyco_transf_90	Glycosyl transferase family 90	7.5E-12	341	461

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q5K8R6\|CXT1_CRYNJ	Beta-1,2-xylosyltransferase 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CXT1 PE=1 SV=1	1	466	3.0E-31
sp\|Q29AU6\|RUMI_DROPS	O-glucosyltransferase rumi OS=Drosophila pseudoobscura pseudoobscura GN=rumi PE=3 SV=1	341	461	9.0E-08
sp\|Q6UW63\|KDEL1_HUMAN	KDEL motif-containing protein 1 OS=Homo sapiens GN=KDELC1 PE=1 SV=1	336	461	3.0E-07
sp\|Q9JHP7\|KDEL1_MOUSE	KDEL motif-containing protein 1 OS=Mus musculus GN=Kdelc1 PE=1 SV=1	342	461	2.0E-06
sp\|A0NDG6\|RUMI_ANOGA	O-glucosyltransferase rumi homolog OS=Anopheles gambiae GN=AGAP004267 PE=3 SV=1	341	461	3.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 19	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|4399 LRPYWALDARTLRRRAAAWHFVVRVRAGKASMKGDVGDRVPWLRLWTELISEFAGSLPDVDMPINYMDESRILLP FDAVADLVRREARDRTMPRADQVAANFSGLRDVDEAGPGQPAYDPAWHGPGEQYWHLAVKACGPHTPAHGVGQGD LSGPAAFPHHYRPSYGYKGYVQNWTAAKDPCLQPHIRQLHGTFIEPISLSSTEELIPLFGGSKLPLNNEILIPGA MYLTKREFYSGGDSHGPSWVRKKDGLIWRGDGSGGRARPHNWQHFHRHRLVDMLNGTSVSLAEAAGGRAMAFELP SGDLDPGFASVGAWLGTFADAAFVHLCPGDRCGFLEDRFAPVKELPMRKQFRYKFLPDADGNSFSARFRGFLRST SLPLKATIYAEWHDDRLEPWLHFVPLDNTFRDLYAALGFFADGPGRPGDAAARFIAERGRQWAETVLRREDMRLY MWRLLLEWARVCDDRRQLLGFVDDLAEGRTGQ*
Coding	>Hirsu2\|4399 CTGCGGCCGTACTGGGCCCTCGACGCCCGCACCCTGCGCCGCCGCGCCGCGGCCTGGCACTTCGTCGTCCGGGTC CGGGCCGGCAAGGCTTCCATGAAGGGCGACGTCGGCGACCGCGTGCCGTGGCTGCGGCTATGGACGGAGCTGATA TCCGAGTTCGCCGGCTCCCTTCCCGACGTCGACATGCCCATCAACTACATGGACGAGTCGCGGATCCTGCTGCCC TTTGATGCCGTCGCCGACCTCGTCCGCCGCGAGGCCCGGGACCGCACCATGCCGCGGGCCGACCAGGTGGCCGCC AACTTCTCCGGCCTGCGCGACGTCGACGAGGCCGGCCCCGGCCAGCCGGCCTACGACCCCGCCTGGCACGGCCCG GGCGAGCAGTACTGGCATCTCGCCGTCAAGGCCTGCGGCCCGCACACGCCGGCCCACGGCGTCGGCCAGGGCGAC CTCTCCGGGCCGGCCGCCTTCCCGCACCACTACCGCCCGAGCTACGGCTACAAGGGCTACGTGCAGAACTGGACG GCGGCCAAGGACCCGTGCCTGCAGCCGCATATCCGCCAGCTGCACGGCACCTTTATCGAGCCCATCAGCCTGTCC TCGACCGAGGAGCTGATCCCGCTCTTCGGCGGCTCTAAGCTGCCGCTTAATAACGAGATCCTGATCCCGGGCGCC ATGTACCTGACCAAGCGCGAGTTCTACTCCGGCGGAGACAGCCACGGGCCGTCGTGGGTACGCAAGAAGGACGGC CTCATCTGGCGCGGCGACGGCTCCGGCGGCCGCGCCCGGCCGCATAACTGGCAGCACTTCCACCGACACCGCCTC GTCGACATGCTCAACGGCACCTCGGTCTCGCTCGCCGAGGCCGCCGGCGGCCGGGCCATGGCCTTCGAGCTCCCG TCCGGCGATCTGGACCCGGGCTTTGCCTCCGTGGGGGCCTGGCTCGGCACCTTCGCCGACGCCGCCTTCGTCCAC CTCTGCCCGGGCGACCGGTGCGGCTTCCTCGAAGACCGGTTCGCGCCCGTCAAGGAGCTGCCGATGCGGAAGCAG TTCCGCTACAAGTTCCTGCCCGACGCCGACGGCAACTCCTTCAGTGCGCGCTTCCGCGGCTTCCTACGCTCGACG AGCCTGCCGCTCAAGGCGACCATCTACGCCGAGTGGCACGACGACCGGCTCGAGCCGTGGCTGCACTTCGTGCCG CTCGACAACACCTTCCGCGACTTATACGCCGCCCTCGGCTTCTTCGCCGACGGGCCGGGGCGGCCCGGCGACGCC GCCGCGCGCTTTATCGCCGAGCGCGGCCGCCAGTGGGCCGAGACGGTCCTGAGGAGGGAGGATATGCGGCTCTAT ATGTGGCGCCTGCTGCTCGAGTGGGCGCGCGTCTGCGACGACCGGCGCCAGCTGCTCGGCTTCGTCGACGACTTG GCGGAGGGCCGGACGGGCCAATAG
Transcript	>Hirsu2\|4399 CTGCGGCCGTACTGGGCCCTCGACGCCCGCACCCTGCGCCGCCGCGCCGCGGCCTGGCACTTCGTCGTCCGGGTC CGGGCCGGCAAGGCTTCCATGAAGGGCGACGTCGGCGACCGCGTGCCGTGGCTGCGGCTATGGACGGAGCTGATA TCCGAGTTCGCCGGCTCCCTTCCCGACGTCGACATGCCCATCAACTACATGGACGAGTCGCGGATCCTGCTGCCC TTTGATGCCGTCGCCGACCTCGTCCGCCGCGAGGCCCGGGACCGCACCATGCCGCGGGCCGACCAGGTGGCCGCC AACTTCTCCGGCCTGCGCGACGTCGACGAGGCCGGCCCCGGCCAGCCGGCCTACGACCCCGCCTGGCACGGCCCG GGCGAGCAGTACTGGCATCTCGCCGTCAAGGCCTGCGGCCCGCACACGCCGGCCCACGGCGTCGGCCAGGGCGAC CTCTCCGGGCCGGCCGCCTTCCCGCACCACTACCGCCCGAGCTACGGCTACAAGGGCTACGTGCAGAACTGGACG GCGGCCAAGGACCCGTGCCTGCAGCCGCATATCCGCCAGCTGCACGGCACCTTTATCGAGCCCATCAGCCTGTCC TCGACCGAGGAGCTGATCCCGCTCTTCGGCGGCTCTAAGCTGCCGCTTAATAACGAGATCCTGATCCCGGGCGCC ATGTACCTGACCAAGCGCGAGTTCTACTCCGGCGGAGACAGCCACGGGCCGTCGTGGGTACGCAAGAAGGACGGC CTCATCTGGCGCGGCGACGGCTCCGGCGGCCGCGCCCGGCCGCATAACTGGCAGCACTTCCACCGACACCGCCTC GTCGACATGCTCAACGGCACCTCGGTCTCGCTCGCCGAGGCCGCCGGCGGCCGGGCCATGGCCTTCGAGCTCCCG TCCGGCGATCTGGACCCGGGCTTTGCCTCCGTGGGGGCCTGGCTCGGCACCTTCGCCGACGCCGCCTTCGTCCAC CTCTGCCCGGGCGACCGGTGCGGCTTCCTCGAAGACCGGTTCGCGCCCGTCAAGGAGCTGCCGATGCGGAAGCAG TTCCGCTACAAGTTCCTGCCCGACGCCGACGGCAACTCCTTCAGTGCGCGCTTCCGCGGCTTCCTACGCTCGACG AGCCTGCCGCTCAAGGCGACCATCTACGCCGAGTGGCACGACGACCGGCTCGAGCCGTGGCTGCACTTCGTGCCG CTCGACAACACCTTCCGCGACTTATACGCCGCCCTCGGCTTCTTCGCCGACGGGCCGGGGCGGCCCGGCGACGCC GCCGCGCGCTTTATCGCCGAGCGCGGCCGCCAGTGGGCCGAGACGGTCCTGAGGAGGGAGGATATGCGGCTCTAT ATGTGGCGCCTGCTGCTCGAGTGGGCGCGCGTCTGCGACGACCGGCGCCAGCTGCTCGGCTTCGTCGACGACTTG GCGGAGGGCCGGACGGGCCAATAG
Gene	>Hirsu2\|4399 CTGCGGCCGTACTGGGCCCTCGACGCCCGCACCCTGCGCCGCCGCGCCGCGGCCTGGCACTTCGTCGTCCGGGTC CGGGCCGGCAAGGCTTCCATGAAGGGCGACGTCGGCGACCGCGTGCCGTGGCTGCGGCTATGGACGGAGCTGATA TCCGAGTTCGCCGGCTCCCTTCCCGACGTCGACATGCCCATCAACTACATGGACGAGTCGCGGATCCTGCTGCCC TTTGATGCCGTCGCCGACCTCGTCCGCCGCGAGGCCCGGGACCGCACCATGCCGCGGGCCGACCAGGTGGCCGCC AACTTCTCCGGCCTGCGCGACGTCGACGAGGCCGGCCCCGGCCAGCCGGCCTACGACCCCGCCTGGCACGGCCCG GGCGAGCAGTACTGGCATCTCGCCGTCAAGGCCTGCGGCCCGCACACGCCGGCCCACGGCGTCGGCCAGGGCGAC CTCTCCGGGCCGGCCGCCTTCCCGCACCACTACCGCCCGAGCTACGGCTACAAGGGCTACGTGCAGAACTGGACG GCGGCCAAGGACCCGTGCCTGCAGCCGCATATCCGCCAGCTGCACGGCACCTTTATCGAGCCCATCAGCCTGTCC TCGACCGAGGAGCTGATCCCGCTCTTCGGCGGCTCTAAGCTGCCGCTTAATAACGAGATCCTGATCCCGGGCGCC ATGTACCTGACCAAGCGCGAGTTCTACTCCGGCGGAGACAGCCACGGGCCGTCGTGGGTACGCAAGAAGGACGGC CTCATCTGGCGCGGCGACGGCTCCGGCGGCCGCGCCCGGCCGCATAACTGGCAGCACTTCCACCGACACCGCCTC GTCGACATGCTCAACGGCACCTCGGTCTCGCTCGCCGAGGCCGCCGGCGGCCGGGCCATGGCCTTCGAGCTCCCG TCCGGCGATCTGGACCCGGGCTTTGCCTCCGTGGGGGCCTGGCTCGGCACCTTCGCCGACGCCGCCTTCGTCCAC CTCTGCCCGGGCGACCGGTGCGGCTTCCTCGAAGACCGGTTCGCGCCCGTCAAGGAGCTGCCGATGCGGAAGCAG TTCCGCTACAAGTTCCTGCCCGACGCCGACGGCAACTCCTTCAGTGCGCGCTTCCGCGGCTTCCTACGCTCGACG AGCCTGCCGCTCAAGGCGACCATCTACGCCGAGTGGCACGACGACCGGCTCGAGCCGTGGCTGCACTTCGTGCCG CTCGACAACACCTTCCGCGACTTATACGCCGCCCTCGGCTTCTTCGCCGACGGGCCGGGGCGGCCCGGCGACGCC GCCGCGCGCTTTATCGCCGAGCGCGGCCGCCAGTGGGCCGAGACGGTCCTGAGGAGGGAGGATATGCGGCTCTAT ATGTGGCGCCTGCTGCTCGAGTGGGCGCGCGTCTGCGACGACCGGCGCCAGCTGCTCGGCTTCGTCGACGACTTG GCGGAGGGCCGGACGGGCCAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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