Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4380
Gene name
LocationContig_2232:2095..3184
Strand+
Gene length (bp)1089
Transcript length (bp)879
Coding sequence length (bp)879
Protein length (aa) 293

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 41 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 54 76 22
3 96 118 22
4 138 160 22
5 187 209 22
6 222 244 22
7 254 276 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4380
MGLYSDPPSLRAFRDDKPTLLVCWWATSFCSLMILLRVTGRFVRTEKLFREDKISALALVPLALRMVCVHFILLY
GTNNADFSRVHLTPLELRQKTIASGLVLASRSFYAATLWVLKYAILEFLKRLTDLTWQRTHQATLVVIRWTLVAT
FVAVLVSNLVECQPFSHHWQVVPDPGGQCRQGYVQLITMATCNIATDALLVVFPIPIIVRSQMRFRRKLQLIVLF
SLSLAVVAVTAYRLPRIIAEHGRQQYRSLLASVELIFATAAANALVLGSFVRDRGVKKPKTLSGTSA*
Coding >Hirsu2|4380
ATGGGCCTCTACTCGGATCCCCCCAGCCTGCGCGCGTTCCGCGACGACAAGCCGACGCTGCTCGTCTGCTGGTGG
GCCACGTCCTTCTGCTCGCTCATGATCCTCCTCCGCGTCACCGGCCGCTTCGTCCGCACCGAGAAGCTCTTCCGC
GAGGACAAGATCTCGGCCCTCGCCCTCGTGCCCCTGGCCCTGCGCATGGTCTGCGTCCACTTCATCCTCCTCTAC
GGCACCAACAATGCCGACTTCTCCCGCGTCCACCTGACGCCCCTCGAGCTGCGCCAGAAGACGATTGCCAGCGGC
CTGGTCCTCGCCAGCCGCTCCTTTTACGCCGCCACCCTTTGGGTCCTCAAGTACGCCATCCTCGAGTTCCTCAAG
CGCCTGACGGACCTCACCTGGCAGCGCACGCACCAGGCGACGCTCGTCGTCATCCGCTGGACCCTGGTCGCCACC
TTCGTCGCCGTCCTCGTCAGCAACCTGGTCGAGTGCCAGCCCTTCAGCCACCACTGGCAGGTCGTGCCCGACCCG
GGCGGCCAGTGCCGCCAGGGCTACGTCCAGCTCATCACCATGGCCACCTGCAACATCGCCACCGACGCCCTGCTC
GTCGTCTTCCCCATCCCCATCATCGTCCGCTCCCAGATGCGCTTCCGCCGCAAGCTGCAGTTGATCGTCCTCTTC
TCCCTCAGCCTCGCCGTCGTCGCCGTCACCGCCTATCGCCTCCCCCGCATCATCGCCGAGCACGGCCGCCAGCAG
TACCGCTCGCTCCTGGCCTCGGTCGAGCTCATCTTCGCCACCGCCGCCGCCAACGCCCTCGTCCTCGGCTCCTTC
GTCCGCGACCGCGGCGTCAAGAAGCCCAAGACCTTGTCCGGGACGTCGGCCTGA
Transcript >Hirsu2|4380
ATGGGCCTCTACTCGGATCCCCCCAGCCTGCGCGCGTTCCGCGACGACAAGCCGACGCTGCTCGTCTGCTGGTGG
GCCACGTCCTTCTGCTCGCTCATGATCCTCCTCCGCGTCACCGGCCGCTTCGTCCGCACCGAGAAGCTCTTCCGC
GAGGACAAGATCTCGGCCCTCGCCCTCGTGCCCCTGGCCCTGCGCATGGTCTGCGTCCACTTCATCCTCCTCTAC
GGCACCAACAATGCCGACTTCTCCCGCGTCCACCTGACGCCCCTCGAGCTGCGCCAGAAGACGATTGCCAGCGGC
CTGGTCCTCGCCAGCCGCTCCTTTTACGCCGCCACCCTTTGGGTCCTCAAGTACGCCATCCTCGAGTTCCTCAAG
CGCCTGACGGACCTCACCTGGCAGCGCACGCACCAGGCGACGCTCGTCGTCATCCGCTGGACCCTGGTCGCCACC
TTCGTCGCCGTCCTCGTCAGCAACCTGGTCGAGTGCCAGCCCTTCAGCCACCACTGGCAGGTCGTGCCCGACCCG
GGCGGCCAGTGCCGCCAGGGCTACGTCCAGCTCATCACCATGGCCACCTGCAACATCGCCACCGACGCCCTGCTC
GTCGTCTTCCCCATCCCCATCATCGTCCGCTCCCAGATGCGCTTCCGCCGCAAGCTGCAGTTGATCGTCCTCTTC
TCCCTCAGCCTCGCCGTCGTCGCCGTCACCGCCTATCGCCTCCCCCGCATCATCGCCGAGCACGGCCGCCAGCAG
TACCGCTCGCTCCTGGCCTCGGTCGAGCTCATCTTCGCCACCGCCGCCGCCAACGCCCTCGTCCTCGGCTCCTTC
GTCCGCGACCGCGGCGTCAAGAAGCCCAAGACCTTGTCCGGGACGTCGGCCTGA
Gene >Hirsu2|4380
ATGGGCCTCTACTCGGATCCCCCCAGCCTGCGCGCGTTCCGCGACGACAAGCCGACGCTGCTCGTCTGCTGGTGG
GCCACGTCCTTCTGCTCGCTCATGATCCTCCTCCGCGTCACCGGCCGCTTCGTCCGCACCGAGAAGCTCTTCCGC
GAGGACAAGATCTCGGCCCTCGCCCTCGTGCCCCTGGCCCTGCGCATGGTCTGCGTCCACTTCATCCTCCTCTAC
GGCACCAACAATGCCGACTTCTCCCGCGTCCACCTGACGCCCCTCGAGCTGCGCCAGAAGACGATTGCCAGCGGC
CTGGTCCTCGCCAGCCGCTCCTTTTACGCCGCCACGTATGTTGTTCCTCCTCCCCTCCCGTCCTCTTGCCCTCTT
TTCTCAGGCGCGTTGCCGTCACCCACGGCGGGCGGGAAAGAACGGCTCGTTGACCGTGGACGCGCGCGCGCGCGC
ACAGCCTTTGGGTCCTCAAGTACGCCATCCTCGAGTTCCTCAAGCGCCTGACGGACCTCACCTGGCAGCGCACGC
ACCAGGCGACGCTCGTCGTCATCCGCTGGACCCTGGTCGCCACCTTCGTCGCCGTCCTCGTCAGCAACCTGGTCG
AGTGCCAGCCCTTCAGCCACCACTGGCAGGTCGTGCCCGACCCGGGCGGCCAGTGCCGCCAGGGCTACGTCCAGC
TCATCACCATGGCCACCTGCAACATCGCCACCGACGCCCTGCTCGTCGTCTTCCCCATCCCCATCATCGTCCGCT
CCCAGATGCGCTTCCGCCGCAAGCTGCAGTTGATCGTCCTCTTCTCCCTCAGCCTCGCCGTCGTCGCCGTCACCG
CCTATCGCCTCCCCCGCATCATCGCCGAGCACGGCCGCCAGCAGTACCGCTCGCTCCTGGCCTCGGTCGAGCTCA
TCTTCGCCACCGCCGCCGCCAACGCCCTCGTCCTCGGCTCCTTCGTCCGCGACCGCGGCGTCAAGAAGCCCAAGT
TCCACCGCCCCTCCGTCACCGACTCCCTCGACCGCGCCGGCGGCTACCTTCGGCGCCCCACCCTGCACCTCCTGT
GGGGCAGCGACGAGGACCTTGTCCGGGACGTCGGCCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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