© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|4360 |
| Gene name | |
| Location | Contig_2224:2538..3201 |
| Strand | - |
| Gene length (bp) | 663 |
| Transcript length (bp) | 582 |
| Coding sequence length (bp) | 582 |
| Protein length (aa) | 194 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01546 | Peptidase_M20 | Peptidase family M20/M25/M40 | 1.2E-06 | 81 | 174 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13968|YE48_SCHPO | Uncharacterized carboxypeptidase C24C9.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24C9.08 PE=3 SV=1 | 1 | 175 | 5.0E-23 |
| sp|P27614|CBPS_YEAST | Carboxypeptidase S OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CPS1 PE=1 SV=2 | 1 | 173 | 1.0E-17 |
| sp|P0C155|CBPS2_YEAST | Putative carboxypeptidase YOL153C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL153C PE=5 SV=1 | 1 | 173 | 1.0E-15 |
| sp|Q55FR8|CBPS2_DICDI | Probable carboxypeptidase S-like 2 OS=Dictyostelium discoideum GN=DDB_G0267984 PE=3 SV=1 | 84 | 174 | 4.0E-09 |
| sp|Q2T9M7|P20D1_BOVIN | Probable carboxypeptidase PM20D1 OS=Bos taurus GN=PM20D1 PE=2 SV=1 | 84 | 174 | 4.0E-08 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13968|YE48_SCHPO | Uncharacterized carboxypeptidase C24C9.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24C9.08 PE=3 SV=1 | 1 | 175 | 5.0E-23 |
| sp|P27614|CBPS_YEAST | Carboxypeptidase S OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CPS1 PE=1 SV=2 | 1 | 173 | 1.0E-17 |
| sp|P0C155|CBPS2_YEAST | Putative carboxypeptidase YOL153C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL153C PE=5 SV=1 | 1 | 173 | 1.0E-15 |
| sp|Q55FR8|CBPS2_DICDI | Probable carboxypeptidase S-like 2 OS=Dictyostelium discoideum GN=DDB_G0267984 PE=3 SV=1 | 84 | 174 | 4.0E-09 |
| sp|Q2T9M7|P20D1_BOVIN | Probable carboxypeptidase PM20D1 OS=Bos taurus GN=PM20D1 PE=2 SV=1 | 84 | 174 | 4.0E-08 |
| sp|Q55DL1|CBPS1_DICDI | Probable carboxypeptidase S-like 1 OS=Dictyostelium discoideum GN=DDB_G0270582 PE=3 SV=1 | 84 | 177 | 5.0E-08 |
| sp|Q8C165|P20D1_MOUSE | Probable carboxypeptidase PM20D1 OS=Mus musculus GN=Pm20d1 PE=1 SV=1 | 80 | 174 | 6.0E-08 |
| sp|Q08BT9|P20D1_XENTR | Probable carboxypeptidase PM20D1 OS=Xenopus tropicalis GN=pm20d1 PE=2 SV=1 | 84 | 184 | 1.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016787 | hydrolase activity | Yes |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4360 MPELVTLGVNYRVAVHDSVADVQRNAARLAGAVADRYGIRLRAFEGEAGVDVGLGPESGAGPGTRNAVDYNGTLY IRTGKTSAPTPVTPADGPVWDAFAGVIRHTFAAPNRTVVPAAEGMTGNTDTRHYLNLSRNIFRWTPVRLGQFAGI HTYNEGVLMSGHMDMVKFYYNLVRVFSGDRFHLDASARAPSEL* |
| Coding | >Hirsu2|4360 ATGCCCGAGCTAGTCACCCTCGGCGTCAACTACCGCGTCGCCGTCCACGACAGCGTCGCCGACGTCCAGCGAAAC GCCGCCCGCCTGGCCGGCGCCGTCGCCGACCGCTACGGCATCCGCCTCCGCGCCTTTGAGGGCGAGGCCGGCGTC GACGTCGGCCTCGGCCCCGAGAGTGGGGCCGGGCCCGGGACCCGCAACGCCGTCGACTACAACGGCACCCTCTAC ATCCGCACCGGCAAGACCTCCGCCCCGACCCCCGTCACCCCCGCCGACGGGCCCGTCTGGGACGCCTTCGCCGGC GTCATCCGCCACACCTTCGCCGCCCCCAACCGCACCGTCGTCCCGGCCGCCGAGGGCATGACCGGCAACACCGAC ACCCGCCACTATCTCAACCTCAGCCGCAACATCTTCCGCTGGACGCCCGTCCGCCTCGGCCAGTTCGCCGGCATC CACACCTACAACGAGGGCGTCCTCATGAGCGGCCACATGGACATGGTCAAGTTCTACTACAACCTCGTCCGCGTC TTCAGCGGCGATCGCTTCCACCTCGACGCCTCCGCTCGAGCCCCGTCCGAGCTCTAG |
| Transcript | >Hirsu2|4360 ATGCCCGAGCTAGTCACCCTCGGCGTCAACTACCGCGTCGCCGTCCACGACAGCGTCGCCGACGTCCAGCGAAAC GCCGCCCGCCTGGCCGGCGCCGTCGCCGACCGCTACGGCATCCGCCTCCGCGCCTTTGAGGGCGAGGCCGGCGTC GACGTCGGCCTCGGCCCCGAGAGTGGGGCCGGGCCCGGGACCCGCAACGCCGTCGACTACAACGGCACCCTCTAC ATCCGCACCGGCAAGACCTCCGCCCCGACCCCCGTCACCCCCGCCGACGGGCCCGTCTGGGACGCCTTCGCCGGC GTCATCCGCCACACCTTCGCCGCCCCCAACCGCACCGTCGTCCCGGCCGCCGAGGGCATGACCGGCAACACCGAC ACCCGCCACTATCTCAACCTCAGCCGCAACATCTTCCGCTGGACGCCCGTCCGCCTCGGCCAGTTCGCCGGCATC CACACCTACAACGAGGGCGTCCTCATGAGCGGCCACATGGACATGGTCAAGTTCTACTACAACCTCGTCCGCGTC TTCAGCGGCGATCGCTTCCACCTCGACGCCTCCGCTCGAGCCCCGTCCGAGCTCTAG |
| Gene | >Hirsu2|4360 ATGCCCGAGCTAGTCACCCTCGGCGTCAACTACCGCGTCGCCGTCCACGACAGCGTCGCCGACGTCCAGCGAAAC GCCGCCCGCCTGGCCGGCGCCGTCGCCGACCGCTACGGCATCCGCCTCCGCGCCTTTGAGGGCGAGGCCGGCGTC GACGTCGGCCTCGGCCCCGAGAGTGGGGCCGGGCCCGGGACCCGCAACGCCGTCGACTACAACGGCACCCTCTAC ATCCGCACCGGCAAGACCTCCGCCCCGACCCCCGTCACCCCCGCCGACGGGCCCGTCTGGGACGCCTTCGCCGGC GTCATCCGCCACACCTTCGCCGCCCCCAACCGCACCGTCGTCCCGGCCGCCGAGGGCATGACCGGCAACACCGAC ACCCGCCACTATCTCAGTCGGTTCACCTGCGCTTCCTCCTCTCCCTCTACAGACCCCCCCCCCTTTCTTGCTGCT CGGCTGCTGACTTTCGTTCCAGACCTCAGCCGCAACATCTTCCGCTGGACGCCCGTCCGCCTCGGCCAGTTCGCC GGCATCCACACCTACAACGAGGGCGTCCTCATGAGCGGCCACATGGACATGGTCAAGTTCTACTACAACCTCGTC CGCGTCTTCAGCGGCGATCGCTTCCACCTCGACGCCTCCGCTCGAGCCCCGTCCGAGCTCTAG |