Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4340
Gene name
LocationContig_2216:162..633
Strand-
Gene length (bp)471
Transcript length (bp)471
Coding sequence length (bp)471
Protein length (aa) 157

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08316 Pal1 Pal1 cell morphology protein 4.6E-06 32 81

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4340
MSDRPLDRIRADARAADRRLKHQRRRTAGYTDCIDRLDTIGPAYHHAGPFDAALASRNAGNPRYSPLAAVHDSNM
EAIRATPRENLIDALSRHVPLQGTASVPPGARDMSGNLMDYAEGADLMREPDAAGGAYKRWAGIVSLSCCPPLSL
VQGHRR*
Coding >Hirsu2|4340
ATGAGCGACCGCCCCCTCGACCGGATCCGGGCCGACGCCCGGGCCGCGGACCGGCGCCTCAAGCACCAGCGCCGC
CGCACCGCCGGCTACACCGACTGCATCGACCGGCTCGACACCATCGGCCCGGCCTACCACCACGCCGGGCCGTTC
GACGCCGCGCTGGCCAGCCGCAACGCCGGCAACCCGCGCTACTCGCCCCTGGCCGCCGTCCATGACTCCAACATG
GAGGCCATCCGCGCCACCCCGCGCGAGAACCTCATCGACGCCCTCAGCCGCCACGTCCCGCTGCAGGGCACCGCC
TCCGTCCCGCCCGGCGCCCGCGACATGTCCGGCAACCTGATGGACTACGCCGAGGGCGCCGACCTGATGCGCGAG
CCCGACGCCGCCGGCGGCGCCTACAAGCGCTGGGCCGGCATCGTGAGCCTCTCCTGCTGCCCCCCCCTGTCTCTT
GTCCAAGGACATCGCCGTTGA
Transcript >Hirsu2|4340
ATGAGCGACCGCCCCCTCGACCGGATCCGGGCCGACGCCCGGGCCGCGGACCGGCGCCTCAAGCACCAGCGCCGC
CGCACCGCCGGCTACACCGACTGCATCGACCGGCTCGACACCATCGGCCCGGCCTACCACCACGCCGGGCCGTTC
GACGCCGCGCTGGCCAGCCGCAACGCCGGCAACCCGCGCTACTCGCCCCTGGCCGCCGTCCATGACTCCAACATG
GAGGCCATCCGCGCCACCCCGCGCGAGAACCTCATCGACGCCCTCAGCCGCCACGTCCCGCTGCAGGGCACCGCC
TCCGTCCCGCCCGGCGCCCGCGACATGTCCGGCAACCTGATGGACTACGCCGAGGGCGCCGACCTGATGCGCGAG
CCCGACGCCGCCGGCGGCGCCTACAAGCGCTGGGCCGGCATCGTGAGCCTCTCCTGCTGCCCCCCCCTGTCTCTT
GTCCAAGGACATCGCCGTTGA
Gene >Hirsu2|4340
ATGAGCGACCGCCCCCTCGACCGGATCCGGGCCGACGCCCGGGCCGCGGACCGGCGCCTCAAGCACCAGCGCCGC
CGCACCGCCGGCTACACCGACTGCATCGACCGGCTCGACACCATCGGCCCGGCCTACCACCACGCCGGGCCGTTC
GACGCCGCGCTGGCCAGCCGCAACGCCGGCAACCCGCGCTACTCGCCCCTGGCCGCCGTCCATGACTCCAACATG
GAGGCCATCCGCGCCACCCCGCGCGAGAACCTCATCGACGCCCTCAGCCGCCACGTCCCGCTGCAGGGCACCGCC
TCCGTCCCGCCCGGCGCCCGCGACATGTCCGGCAACCTGATGGACTACGCCGAGGGCGCCGACCTGATGCGCGAG
CCCGACGCCGCCGGCGGCGCCTACAAGCGCTGGGCCGGCATCGTGAGCCTCTCCTGCTGCCCCCCCCTGTCTCTT
GTCCAAGGACATCGCCGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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