Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4339
Gene name
LocationContig_2215:103..853
Strand+
Gene length (bp)750
Transcript length (bp)657
Coding sequence length (bp)657
Protein length (aa) 219

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13489 Methyltransf_23 Methyltransferase domain 4.7E-12 1 87
PF08241 Methyltransf_11 Methyltransferase domain 1.4E-07 14 67
PF08242 Methyltransf_12 Methyltransferase domain 3.1E-07 13 66
PF13847 Methyltransf_31 Methyltransferase domain 1.5E-06 13 74
PF01209 Ubie_methyltran ubiE/COQ5 methyltransferase family 2.6E-04 29 73

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9C6B9|PEAM3_ARATH Phosphoethanolamine N-methyltransferase 3 OS=Arabidopsis thaliana GN=NMT3 PE=2 SV=2 14 129 1.0E-07
sp|Q944H0|PEAM2_ARATH Phosphomethylethanolamine N-methyltransferase OS=Arabidopsis thaliana GN=NMT2 PE=2 SV=2 14 129 5.0E-06
sp|Q9FR44|PEAM1_ARATH Phosphoethanolamine N-methyltransferase 1 OS=Arabidopsis thaliana GN=NMT1 PE=1 SV=1 14 129 6.0E-06

GO

GO Term Description Terminal node
GO:0008168 methyltransferase activity Yes
GO:0016740 transferase activity No
GO:0003674 molecular_function No
GO:0016741 transferase activity, transferring one-carbon groups No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 40 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4339
MDLSPIQPDWVPENVEFFVDDIEHQHGWTYAENTFDYIHVRHTIHSIKDRPQMWRRIYEHLKPGGYVEVQEFQYV
SGCDDGSCDGPYAWRDFLAYLEAGLAALGSQLNSIQSAEPELLAAGFGELRYQDLKCPVGPWPKKLRLQECGHLL
RDVIMWGLVGLSKRPFRDGLGWTDLQIEMFLVDVRKDLSREAANGLPKFHAYFPFRTIYGRKPLRPAR*
Coding >Hirsu2|4339
ATGGACCTGTCGCCCATCCAGCCGGACTGGGTGCCGGAGAACGTCGAGTTCTTCGTCGACGACATCGAACACCAG
CACGGCTGGACGTATGCCGAGAACACGTTCGACTACATCCACGTCCGACACACGATCCACTCCATCAAGGACCGG
CCGCAGATGTGGCGGCGCATATACGAGCACCTCAAGCCCGGCGGCTACGTCGAGGTGCAAGAGTTCCAGTACGTG
TCCGGCTGCGACGACGGCTCGTGCGACGGCCCGTACGCCTGGCGCGACTTCCTGGCCTACCTCGAGGCCGGCCTG
GCGGCGCTGGGCTCGCAGCTCAACAGCATCCAGTCGGCCGAGCCGGAGCTGCTGGCGGCCGGCTTCGGCGAGCTG
CGCTACCAGGACCTCAAGTGCCCCGTCGGGCCGTGGCCCAAGAAGCTGCGGCTGCAGGAGTGCGGCCACCTGCTG
CGCGACGTCATCATGTGGGGGCTGGTCGGCCTGTCCAAGCGGCCCTTCCGCGACGGCCTCGGCTGGACCGACCTG
CAGATCGAGATGTTCCTCGTCGACGTCCGCAAGGACCTCTCGCGCGAGGCCGCCAACGGCCTGCCCAAGTTCCAC
GCCTACTTTCCCTTCCGCACCATCTACGGCCGCAAGCCGCTGCGCCCTGCCCGTTAG
Transcript >Hirsu2|4339
ATGGACCTGTCGCCCATCCAGCCGGACTGGGTGCCGGAGAACGTCGAGTTCTTCGTCGACGACATCGAACACCAG
CACGGCTGGACGTATGCCGAGAACACGTTCGACTACATCCACGTCCGACACACGATCCACTCCATCAAGGACCGG
CCGCAGATGTGGCGGCGCATATACGAGCACCTCAAGCCCGGCGGCTACGTCGAGGTGCAAGAGTTCCAGTACGTG
TCCGGCTGCGACGACGGCTCGTGCGACGGCCCGTACGCCTGGCGCGACTTCCTGGCCTACCTCGAGGCCGGCCTG
GCGGCGCTGGGCTCGCAGCTCAACAGCATCCAGTCGGCCGAGCCGGAGCTGCTGGCGGCCGGCTTCGGCGAGCTG
CGCTACCAGGACCTCAAGTGCCCCGTCGGGCCGTGGCCCAAGAAGCTGCGGCTGCAGGAGTGCGGCCACCTGCTG
CGCGACGTCATCATGTGGGGGCTGGTCGGCCTGTCCAAGCGGCCCTTCCGCGACGGCCTCGGCTGGACCGACCTG
CAGATCGAGATGTTCCTCGTCGACGTCCGCAAGGACCTCTCGCGCGAGGCCGCCAACGGCCTGCCCAAGTTCCAC
GCCTACTTTCCCTTCCGCACCATCTACGGCCGCAAGCCGCTGCGCCCTGCCCGTTAG
Gene >Hirsu2|4339
ATGGACCTGTCGCCCATCCAGCCGGACTGGGTGCCGGAGAACGTCGAGTTCTTCGTCGACGACATCGAACACCAG
CACGGCTGGACGTATGCCGAGAACACGTTCGACTACATCCACGTCCGACACACGATCCACTCCATCAAGGACCGG
CCGCAGATGTGGCGGCGCATATACGAGTATGTCTCTTTCCAACAAGCACCCTTGGGCCTCTTCCCGACACTCCAC
TCCCCGCTCACTCTCTCTCTCTGTGTGTCTCTCTCTCCCGCAAGGCACCTCAAGCCCGGCGGCTACGTCGAGGTG
CAAGAGTTCCAGTACGTGTCCGGCTGCGACGACGGCTCGTGCGACGGCCCGTACGCCTGGCGCGACTTCCTGGCC
TACCTCGAGGCCGGCCTGGCGGCGCTGGGCTCGCAGCTCAACAGCATCCAGTCGGCCGAGCCGGAGCTGCTGGCG
GCCGGCTTCGGCGAGCTGCGCTACCAGGACCTCAAGTGCCCCGTCGGGCCGTGGCCCAAGAAGCTGCGGCTGCAG
GAGTGCGGCCACCTGCTGCGCGACGTCATCATGTGGGGGCTGGTCGGCCTGTCCAAGCGGCCCTTCCGCGACGGC
CTCGGCTGGACCGACCTGCAGATCGAGATGTTCCTCGTCGACGTCCGCAAGGACCTCTCGCGCGAGGCCGCCAAC
GGCCTGCCCAAGTTCCACGCCTACTTTCCCTTCCGCACCATCTACGGCCGCAAGCCGCTGCGCCCTGCCCGTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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