© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4339 |
| Gene name | |
| Location | Contig_2215:103..853 |
| Strand | + |
| Gene length (bp) | 750 |
| Transcript length (bp) | 657 |
| Coding sequence length (bp) | 657 |
| Protein length (aa) | 219 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13489 | Methyltransf_23 | Methyltransferase domain | 4.2E-12 | 1 | 73 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 1.6E-07 | 14 | 67 |
| PF08242 | Methyltransf_12 | Methyltransferase domain | 3.4E-07 | 13 | 66 |
| PF13847 | Methyltransf_31 | Methyltransferase domain | 2.7E-06 | 13 | 75 |
| PF01209 | Ubie_methyltran | ubiE/COQ5 methyltransferase family | 2.9E-04 | 29 | 73 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9C6B9|PEAM3_ARATH | Phosphoethanolamine N-methyltransferase 3 OS=Arabidopsis thaliana GN=NMT3 PE=2 SV=2 | 14 | 129 | 1.0E-07 |
| sp|Q944H0|PEAM2_ARATH | Phosphomethylethanolamine N-methyltransferase OS=Arabidopsis thaliana GN=NMT2 PE=2 SV=2 | 14 | 129 | 5.0E-06 |
| sp|Q9FR44|PEAM1_ARATH | Phosphoethanolamine N-methyltransferase 1 OS=Arabidopsis thaliana GN=NMT1 PE=1 SV=1 | 14 | 129 | 6.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.4752 | 0.5037 | 0.1759 | 0.0163 | 0.2393 | 0.0318 | 0.2171 | 0.0682 | 0.0865 | 0.1491 |
| Orthofinder run ID | 4 |
| Orthogroup | 158 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4339 MDLSPIQPDWVPENVEFFVDDIEHQHGWTYAENTFDYIHVRHTIHSIKDRPQMWRRIYEHLKPGGYVEVQEFQYV SGCDDGSCDGPYAWRDFLAYLEAGLAALGSQLNSIQSAEPELLAAGFGELRYQDLKCPVGPWPKKLRLQECGHLL RDVIMWGLVGLSKRPFRDGLGWTDLQIEMFLVDVRKDLSREAANGLPKFHAYFPFRTIYGRKPLRPAR* |
| Coding | >Hirsu2|4339 ATGGACCTGTCGCCCATCCAGCCGGACTGGGTGCCGGAGAACGTCGAGTTCTTCGTCGACGACATCGAACACCAG CACGGCTGGACGTATGCCGAGAACACGTTCGACTACATCCACGTCCGACACACGATCCACTCCATCAAGGACCGG CCGCAGATGTGGCGGCGCATATACGAGCACCTCAAGCCCGGCGGCTACGTCGAGGTGCAAGAGTTCCAGTACGTG TCCGGCTGCGACGACGGCTCGTGCGACGGCCCGTACGCCTGGCGCGACTTCCTGGCCTACCTCGAGGCCGGCCTG GCGGCGCTGGGCTCGCAGCTCAACAGCATCCAGTCGGCCGAGCCGGAGCTGCTGGCGGCCGGCTTCGGCGAGCTG CGCTACCAGGACCTCAAGTGCCCCGTCGGGCCGTGGCCCAAGAAGCTGCGGCTGCAGGAGTGCGGCCACCTGCTG CGCGACGTCATCATGTGGGGGCTGGTCGGCCTGTCCAAGCGGCCCTTCCGCGACGGCCTCGGCTGGACCGACCTG CAGATCGAGATGTTCCTCGTCGACGTCCGCAAGGACCTCTCGCGCGAGGCCGCCAACGGCCTGCCCAAGTTCCAC GCCTACTTTCCCTTCCGCACCATCTACGGCCGCAAGCCGCTGCGCCCTGCCCGTTAG |
| Transcript | >Hirsu2|4339 ATGGACCTGTCGCCCATCCAGCCGGACTGGGTGCCGGAGAACGTCGAGTTCTTCGTCGACGACATCGAACACCAG CACGGCTGGACGTATGCCGAGAACACGTTCGACTACATCCACGTCCGACACACGATCCACTCCATCAAGGACCGG CCGCAGATGTGGCGGCGCATATACGAGCACCTCAAGCCCGGCGGCTACGTCGAGGTGCAAGAGTTCCAGTACGTG TCCGGCTGCGACGACGGCTCGTGCGACGGCCCGTACGCCTGGCGCGACTTCCTGGCCTACCTCGAGGCCGGCCTG GCGGCGCTGGGCTCGCAGCTCAACAGCATCCAGTCGGCCGAGCCGGAGCTGCTGGCGGCCGGCTTCGGCGAGCTG CGCTACCAGGACCTCAAGTGCCCCGTCGGGCCGTGGCCCAAGAAGCTGCGGCTGCAGGAGTGCGGCCACCTGCTG CGCGACGTCATCATGTGGGGGCTGGTCGGCCTGTCCAAGCGGCCCTTCCGCGACGGCCTCGGCTGGACCGACCTG CAGATCGAGATGTTCCTCGTCGACGTCCGCAAGGACCTCTCGCGCGAGGCCGCCAACGGCCTGCCCAAGTTCCAC GCCTACTTTCCCTTCCGCACCATCTACGGCCGCAAGCCGCTGCGCCCTGCCCGTTAG |
| Gene | >Hirsu2|4339 ATGGACCTGTCGCCCATCCAGCCGGACTGGGTGCCGGAGAACGTCGAGTTCTTCGTCGACGACATCGAACACCAG CACGGCTGGACGTATGCCGAGAACACGTTCGACTACATCCACGTCCGACACACGATCCACTCCATCAAGGACCGG CCGCAGATGTGGCGGCGCATATACGAGTATGTCTCTTTCCAACAAGCACCCTTGGGCCTCTTCCCGACACTCCAC TCCCCGCTCACTCTCTCTCTCTGTGTGTCTCTCTCTCCCGCAAGGCACCTCAAGCCCGGCGGCTACGTCGAGGTG CAAGAGTTCCAGTACGTGTCCGGCTGCGACGACGGCTCGTGCGACGGCCCGTACGCCTGGCGCGACTTCCTGGCC TACCTCGAGGCCGGCCTGGCGGCGCTGGGCTCGCAGCTCAACAGCATCCAGTCGGCCGAGCCGGAGCTGCTGGCG GCCGGCTTCGGCGAGCTGCGCTACCAGGACCTCAAGTGCCCCGTCGGGCCGTGGCCCAAGAAGCTGCGGCTGCAG GAGTGCGGCCACCTGCTGCGCGACGTCATCATGTGGGGGCTGGTCGGCCTGTCCAAGCGGCCCTTCCGCGACGGC CTCGGCTGGACCGACCTGCAGATCGAGATGTTCCTCGTCGACGTCCGCAAGGACCTCTCGCGCGAGGCCGCCAAC GGCCTGCCCAAGTTCCACGCCTACTTTCCCTTCCGCACCATCTACGGCCGCAAGCCGCTGCGCCCTGCCCGTTAG |