© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4331 |
| Gene name | |
| Location | Contig_221:19488..21115 |
| Strand | + |
| Gene length (bp) | 1627 |
| Transcript length (bp) | 1374 |
| Coding sequence length (bp) | 1374 |
| Protein length (aa) | 458 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03345 | DDOST_48kD | Oligosaccharyltransferase 48 kDa subunit beta | 2.4E-151 | 25 | 447 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O59866|OSTB_SCHPO | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit wbp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=wbp1 PE=2 SV=2 | 35 | 449 | 1.0E-66 |
| sp|Q6ZLK0|OST48_ORYSJ | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Oryza sativa subsp. japonica GN=OST48 PE=2 SV=1 | 23 | 447 | 1.0E-58 |
| sp|Q6NYS8|OST48_DANRE | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Danio rerio GN=ddost PE=2 SV=2 | 9 | 451 | 2.0E-57 |
| sp|B1H3C9|OST48_XENTR | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Xenopus tropicalis GN=ddost PE=2 SV=1 | 5 | 451 | 2.0E-54 |
| sp|P48440|OST48_CHICK | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Gallus gallus GN=DDOST PE=1 SV=1 | 23 | 451 | 4.0E-54 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O59866|OSTB_SCHPO | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit wbp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=wbp1 PE=2 SV=2 | 35 | 449 | 1.0E-66 |
| sp|Q6ZLK0|OST48_ORYSJ | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Oryza sativa subsp. japonica GN=OST48 PE=2 SV=1 | 23 | 447 | 1.0E-58 |
| sp|Q6NYS8|OST48_DANRE | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Danio rerio GN=ddost PE=2 SV=2 | 9 | 451 | 2.0E-57 |
| sp|B1H3C9|OST48_XENTR | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Xenopus tropicalis GN=ddost PE=2 SV=1 | 5 | 451 | 2.0E-54 |
| sp|P48440|OST48_CHICK | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Gallus gallus GN=DDOST PE=1 SV=1 | 23 | 451 | 4.0E-54 |
| sp|P45971|OST48_CAEEL | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Caenorhabditis elegans GN=ostb-1 PE=3 SV=1 | 10 | 455 | 5.0E-54 |
| sp|Q6GNR9|OST48_XENLA | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Xenopus laevis GN=ddost PE=2 SV=1 | 23 | 451 | 2.0E-53 |
| sp|O54734|OST48_MOUSE | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Mus musculus GN=Ddost PE=1 SV=2 | 11 | 451 | 7.0E-53 |
| sp|Q641Y0|OST48_RAT | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus GN=Ddost PE=2 SV=1 | 19 | 451 | 2.0E-52 |
| sp|Q5R501|OST48_PONAB | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Pongo abelii GN=DDOST PE=2 SV=2 | 17 | 451 | 6.0E-52 |
| sp|Q944K2|OST48_ARATH | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Arabidopsis thaliana GN=OST48 PE=2 SV=1 | 36 | 447 | 7.0E-52 |
| sp|P39656|OST48_HUMAN | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Homo sapiens GN=DDOST PE=1 SV=4 | 17 | 451 | 1.0E-51 |
| sp|Q05052|OST48_CANLF | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Canis lupus familiaris GN=DDOST PE=1 SV=1 | 19 | 451 | 2.0E-51 |
| sp|A6QPY0|OST48_BOVIN | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Bos taurus GN=DDOST PE=2 SV=2 | 22 | 451 | 1.0E-50 |
| sp|Q29381|OST48_PIG | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Sus scrofa GN=DDOST PE=1 SV=2 | 22 | 451 | 2.0E-50 |
| sp|Q24319|OST48_DROME | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Drosophila melanogaster GN=Ost48 PE=2 SV=2 | 1 | 456 | 2.0E-48 |
| sp|P33767|OSTB_YEAST | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=WBP1 PE=1 SV=1 | 1 | 452 | 1.0E-44 |
| sp|Q54E62|OST48_DICDI | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Dictyostelium discoideum GN=ddost PE=3 SV=1 | 4 | 447 | 3.0E-44 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0018279 | protein N-linked glycosylation via asparagine | Yes |
| GO:0005789 | endoplasmic reticulum membrane | Yes |
| GO:0018196 | peptidyl-asparagine modification | No |
| GO:0008150 | biological_process | No |
| GO:0019538 | protein metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0043413 | macromolecule glycosylation | No |
| GO:0018193 | peptidyl-amino acid modification | No |
| GO:0008152 | metabolic process | No |
| GO:0070085 | glycosylation | No |
| GO:0043412 | macromolecule modification | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0016020 | membrane | No |
| GO:0031090 | organelle membrane | No |
| GO:0044238 | primary metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0006486 | protein glycosylation | No |
| GO:0005575 | cellular_component | No |
| GO:0036211 | protein modification process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0006487 | protein N-linked glycosylation | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 19 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 423 | 445 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4331 MRSLLSLVVLLFAAAAAALSTTGNRLLVVLDDAADKNAYTRFFGDLAARGFDISYETPRSEGLQLFRLGERSYDH IIFFPTKVKGLGPNLTPSHLLDFVKAQGNILVALSSARPASTSIMSLLAELDMALPVERTGTVVDHFNYDAGSAA EAHDVLVLDAPAGGVRPGLKDYFDMPGAVLALPRAAGHVLGPSQLLTPLLRAPATAYSYDPKEQARGVDPDELFA AGGQLALTSAAQARNSARVAVLGSAEMLEDAWLEASVSRAGAAAKVAANREFAKRLTGWTFQEIGVLRVNDVEHR LRGQNETNPDIYRIKNDVSYSISVSEYFWDKWLPFALPAGDKLQVEFSMLSPFHRLNLAPTLVTKTATVFGSNFT LPDQHGIFNFRVNYKRPLLTYVDEKRTVSVRHMAHDEWPRSYDISGAWPWLSGIAATVSGFVAFCAVWMYSKPAD KRAAKKA* |
| Coding | >Hirsu2|4331 ATGCGGTCGCTTCTCAGCCTCGTTGTTCTACTTTTTGCCGCTGCGGCGGCGGCGCTCAGCACGACTGGCAACCGT CTGCTGGTTGTGCTCGACGACGCGGCCGACAAGAATGCTTATACGCGCTTCTTCGGCGACCTTGCTGCGCGAGGC TTCGACATCTCATACGAAACTCCTCGCAGCGAGGGGTTGCAGCTGTTCCGTCTCGGTGAGCGGAGCTACGACCAC ATCATCTTCTTCCCGACAAAGGTCAAAGGTCTCGGACCGAACCTGACGCCGAGCCACCTCCTCGACTTCGTCAAG GCGCAGGGCAACATCCTCGTGGCGCTGTCGTCGGCCAGGCCGGCCTCGACCTCGATCATGAGCCTGCTCGCCGAG CTGGATATGGCGCTGCCGGTGGAGCGGACGGGCACCGTCGTCGACCACTTCAACTACGACGCCGGGTCGGCCGCT GAGGCGCACGACGTGCTCGTGCTCGACGCCCCGGCCGGCGGCGTGCGGCCCGGCCTGAAGGACTACTTCGACATG CCCGGCGCCGTGCTGGCCCTGCCGCGGGCCGCCGGCCACGTCCTCGGCCCGAGCCAGCTGCTGACGCCGCTGCTG CGCGCCCCCGCCACCGCCTACAGCTACGACCCCAAGGAGCAGGCCCGCGGCGTCGACCCAGACGAGCTCTTCGCC GCCGGCGGCCAGCTTGCCCTGACGTCGGCCGCTCAGGCACGCAACTCGGCCCGCGTCGCCGTCCTCGGCTCCGCC GAGATGCTCGAGGACGCCTGGCTGGAGGCCAGCGTCTCGCGTGCCGGCGCCGCGGCCAAGGTCGCCGCGAACCGC GAGTTTGCCAAGAGGCTGACGGGCTGGACCTTCCAGGAGATTGGCGTCTTGCGGGTCAACGACGTCGAGCACCGC CTGCGGGGGCAGAACGAGACGAACCCGGACATCTACCGGATCAAGAACGACGTGTCGTACAGCATTTCGGTGTCG GAGTACTTCTGGGACAAGTGGCTGCCCTTCGCGCTCCCGGCGGGCGACAAGCTGCAGGTCGAGTTCTCCATGCTG TCGCCCTTCCACCGGCTCAACCTGGCGCCGACGCTGGTGACGAAGACGGCGACGGTGTTCGGCAGCAACTTCACG CTGCCGGACCAGCACGGCATCTTCAACTTCCGGGTCAACTACAAGCGGCCGCTGCTGACGTACGTGGACGAGAAG CGGACAGTCAGCGTGCGGCACATGGCGCACGACGAGTGGCCGCGCAGCTACGACATCTCGGGCGCCTGGCCGTGG CTGTCGGGCATCGCGGCCACCGTGTCCGGCTTCGTGGCCTTTTGCGCTGTCTGGATGTACAGCAAGCCGGCCGAC AAGCGGGCCGCCAAGAAGGCGTAG |
| Transcript | >Hirsu2|4331 ATGCGGTCGCTTCTCAGCCTCGTTGTTCTACTTTTTGCCGCTGCGGCGGCGGCGCTCAGCACGACTGGCAACCGT CTGCTGGTTGTGCTCGACGACGCGGCCGACAAGAATGCTTATACGCGCTTCTTCGGCGACCTTGCTGCGCGAGGC TTCGACATCTCATACGAAACTCCTCGCAGCGAGGGGTTGCAGCTGTTCCGTCTCGGTGAGCGGAGCTACGACCAC ATCATCTTCTTCCCGACAAAGGTCAAAGGTCTCGGACCGAACCTGACGCCGAGCCACCTCCTCGACTTCGTCAAG GCGCAGGGCAACATCCTCGTGGCGCTGTCGTCGGCCAGGCCGGCCTCGACCTCGATCATGAGCCTGCTCGCCGAG CTGGATATGGCGCTGCCGGTGGAGCGGACGGGCACCGTCGTCGACCACTTCAACTACGACGCCGGGTCGGCCGCT GAGGCGCACGACGTGCTCGTGCTCGACGCCCCGGCCGGCGGCGTGCGGCCCGGCCTGAAGGACTACTTCGACATG CCCGGCGCCGTGCTGGCCCTGCCGCGGGCCGCCGGCCACGTCCTCGGCCCGAGCCAGCTGCTGACGCCGCTGCTG CGCGCCCCCGCCACCGCCTACAGCTACGACCCCAAGGAGCAGGCCCGCGGCGTCGACCCAGACGAGCTCTTCGCC GCCGGCGGCCAGCTTGCCCTGACGTCGGCCGCTCAGGCACGCAACTCGGCCCGCGTCGCCGTCCTCGGCTCCGCC GAGATGCTCGAGGACGCCTGGCTGGAGGCCAGCGTCTCGCGTGCCGGCGCCGCGGCCAAGGTCGCCGCGAACCGC GAGTTTGCCAAGAGGCTGACGGGCTGGACCTTCCAGGAGATTGGCGTCTTGCGGGTCAACGACGTCGAGCACCGC CTGCGGGGGCAGAACGAGACGAACCCGGACATCTACCGGATCAAGAACGACGTGTCGTACAGCATTTCGGTGTCG GAGTACTTCTGGGACAAGTGGCTGCCCTTCGCGCTCCCGGCGGGCGACAAGCTGCAGGTCGAGTTCTCCATGCTG TCGCCCTTCCACCGGCTCAACCTGGCGCCGACGCTGGTGACGAAGACGGCGACGGTGTTCGGCAGCAACTTCACG CTGCCGGACCAGCACGGCATCTTCAACTTCCGGGTCAACTACAAGCGGCCGCTGCTGACGTACGTGGACGAGAAG CGGACAGTCAGCGTGCGGCACATGGCGCACGACGAGTGGCCGCGCAGCTACGACATCTCGGGCGCCTGGCCGTGG CTGTCGGGCATCGCGGCCACCGTGTCCGGCTTCGTGGCCTTTTGCGCTGTCTGGATGTACAGCAAGCCGGCCGAC AAGCGGGCCGCCAAGAAGGCGTAG |
| Gene | >Hirsu2|4331 ATGCGGTCGCTTCTCAGCCTCGTTGTTCTACTTTTTGCCGCTGCGGCGGCGGCGCTCAGCACGACTGGCAACCGT CTGCTGGTTGTGCTCGACGACGCGGCCGACAAGAATGCTTATACGCGCTTCTTCGGCGACCTTGCTGGTGAGCTC CGACGGGCTTCTGCGGGAGATGGAATAGGCCGCTAACGTGATGGGTCGCCTTTTTTTTTTGTAGCGCGAGGCTTC GACATCTCATACGAAACTCCTCGCAGCGAGGGGTTGCAGCTGTTCCGTCTCGGTGAGCGGAGCTACGACCACATC ATCTTCTTCCCGACAAAGGTCAAAGGTGGGCGCTCTTCTCCCCCCGCTTTTGCGCCTCTCTCGCCGCTCGTCTGA CTCTTCCGCCTCCACCGCTTCCCACAGGTCTCGGACCGAACCTGACGCCGAGCCACCTCCTCGACTTCGTCAAGG CGCAGGGCAACATCCTCGTGGCGCTGTCGTCGGCCAGGCCGGCCTCGACCTCGATCATGAGCCTGCTCGCCGAGC TGGATATGGCGCTGCCGGTGGAGCGGACGGGCACCGTCGTCGACCACTTCAACTACGACGCCGGGTCGGCCGCTG AGGCGCACGACGTGCTCGTGCTCGACGCCCCGGCCGGCGGCGTGCGGCCCGGCCTGAAGGACTACTTCGACATGC CCGGCGCCGTGCTGGCCCTGCCGCGGGCCGCCGGCCACGTCCTCGGCCCGAGCCAGCTGCTGACGCCGCTGCTGC GCGCCCCCGCCACCGCCTACAGCTACGACCCCAAGGAGCAGGCCCGCGGCGTCGACCCAGACGAGCTCTTCGCCG CCGGCGGCCAGCTTGCCCTGACGTCGGCCGCTCAGGCACGCAACTCGGCCCGCGTCGCCGTCCTCGGCTCCGCCG AGATGCTCGAGGACGCCTGGCTGGAGGCCAGCGTCTCGCGTGCCGGCGCCGCGGCCAAGGTCGCCGCGAACCGCG AGTTTGCCAAGAGGCTGACGGGCTGGACCTTCCAGGAGATTGGCGTCTTGCGGGTCAACGACGTCGAGCACCGCC TGCGGGGGCAGAACGAGACGAACCCGGACATCTACCGGATCAAGAACGACGTGGTGAGTTTTTTTTTATTGGCTC TGTTCGTCGATGCTGGTAACCTGCCGGGGACTGCGAATTCCATGGGCTTGGGCTGCTGCTTCTGCTGACACGATG TGCGCAGTCGTACAGCATTTCGGTGTCGGAGTACTTCTGGGACAAGTGGCTGCCCTTCGCGCTCCCGGCGGGCGA CAAGCTGCAGGTCGAGTTCTCCATGCTGTCGCCCTTCCACCGGCTCAACCTGGCGCCGACGCTGGTGACGAAGAC GGCGACGGTGTTCGGCAGCAACTTCACGCTGCCGGACCAGCACGGCATCTTCAACTTCCGGGTCAACTACAAGCG GCCGCTGCTGACGTACGTGGACGAGAAGCGGACAGTCAGCGTGCGGCACATGGCGCACGACGAGTGGCCGCGCAG CTACGACATCTCGGGCGCCTGGCCGTGGCTGTCGGGCATCGCGGCCACCGTGTCCGGCTTCGTGGCCTTTTGCGC TGTCTGGATGTACAGCAAGCCGGCCGACAAGCGGGCCGCCAAGAAGGCGTAG |