Protein ID | Hirsu2|4312 |
Gene name | |
Location | Contig_220:26985..27891 |
Strand | + |
Gene length (bp) | 906 |
Transcript length (bp) | 906 |
Coding sequence length (bp) | 906 |
Protein length (aa) | 302 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0922 | 0.0619 | 0.9545 | 0.0994 | 0.0809 | 0.0403 | 0.2503 | 0.2292 | 0.1901 | 0.0049 |
Orthofinder run ID | 4 |
Orthogroup | 185 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|4312 MKLAAAVVGTCAPALSLAIQIALVEWVIDTSPPDGLDEVTFPINMANSPHREGYYFAQAFRFQNVNEIGYTGLQP RPDSDGRSIIHAAFSSFQNGTTTSHSQCYDGADGGPGVSCALEIDGDYSHTYNLVVRNIRGDTWRGTLVDAVTGE RHVIGQWTLPPGSGKIGGTEVGFVEYYLSDVPPSVSCNDVPEAEVTFGIPTSGTGGAAYFSKWYEHEKWPCQGDD SGYEATNTASGLNVKVGFSRGTGDITGSDPASESQESSQASGEDTETAPQHETDAAEDVVVEREGRVCKMVCTAK G* |
Coding | >Hirsu2|4312 ATGAAGCTTGCGGCAGCGGTCGTGGGGACTTGTGCTCCAGCCTTGAGCTTAGCGATTCAAATTGCTCTCGTCGAG TGGGTGATTGATACTTCTCCTCCTGACGGTCTTGACGAGGTGACATTTCCCATCAACATGGCCAACTCACCTCAT CGGGAAGGCTACTACTTCGCACAAGCGTTCAGATTCCAGAACGTCAACGAGATTGGATATACTGGTCTTCAGCCA AGGCCCGACTCCGATGGCAGAAGCATCATCCACGCTGCATTTTCGTCGTTCCAGAACGGCACCACAACCTCCCAC TCGCAGTGCTACGATGGTGCAGACGGAGGCCCGGGCGTGAGCTGTGCACTTGAAATCGACGGTGACTACAGCCAC ACGTATAATCTTGTCGTGAGGAACATCCGTGGTGATACTTGGAGGGGGACTCTGGTTGATGCTGTGACGGGCGAA CGTCATGTTATCGGCCAATGGACACTGCCGCCGGGATCTGGCAAGATTGGGGGAACCGAGGTCGGGTTTGTCGAA TATTACCTCTCGGATGTGCCCCCATCGGTCTCTTGCAACGACGTGCCCGAGGCAGAGGTGACCTTTGGCATTCCG ACCTCCGGGACGGGTGGCGCGGCCTACTTCAGCAAGTGGTACGAGCATGAGAAATGGCCGTGCCAAGGCGACGAC AGTGGATATGAAGCGACGAATACTGCCTCGGGTTTGAATGTTAAAGTCGGCTTCTCACGCGGCACCGGCGATATC ACAGGCTCCGACCCGGCCTCAGAAAGCCAAGAATCATCTCAAGCAAGCGGTGAGGATACAGAAACCGCGCCACAA CATGAAACAGACGCGGCTGAGGATGTGGTTGTAGAGCGGGAAGGGAGAGTGTGTAAGATGGTGTGTACGGCCAAG GGTTAA |
Transcript | >Hirsu2|4312 ATGAAGCTTGCGGCAGCGGTCGTGGGGACTTGTGCTCCAGCCTTGAGCTTAGCGATTCAAATTGCTCTCGTCGAG TGGGTGATTGATACTTCTCCTCCTGACGGTCTTGACGAGGTGACATTTCCCATCAACATGGCCAACTCACCTCAT CGGGAAGGCTACTACTTCGCACAAGCGTTCAGATTCCAGAACGTCAACGAGATTGGATATACTGGTCTTCAGCCA AGGCCCGACTCCGATGGCAGAAGCATCATCCACGCTGCATTTTCGTCGTTCCAGAACGGCACCACAACCTCCCAC TCGCAGTGCTACGATGGTGCAGACGGAGGCCCGGGCGTGAGCTGTGCACTTGAAATCGACGGTGACTACAGCCAC ACGTATAATCTTGTCGTGAGGAACATCCGTGGTGATACTTGGAGGGGGACTCTGGTTGATGCTGTGACGGGCGAA CGTCATGTTATCGGCCAATGGACACTGCCGCCGGGATCTGGCAAGATTGGGGGAACCGAGGTCGGGTTTGTCGAA TATTACCTCTCGGATGTGCCCCCATCGGTCTCTTGCAACGACGTGCCCGAGGCAGAGGTGACCTTTGGCATTCCG ACCTCCGGGACGGGTGGCGCGGCCTACTTCAGCAAGTGGTACGAGCATGAGAAATGGCCGTGCCAAGGCGACGAC AGTGGATATGAAGCGACGAATACTGCCTCGGGTTTGAATGTTAAAGTCGGCTTCTCACGCGGCACCGGCGATATC ACAGGCTCCGACCCGGCCTCAGAAAGCCAAGAATCATCTCAAGCAAGCGGTGAGGATACAGAAACCGCGCCACAA CATGAAACAGACGCGGCTGAGGATGTGGTTGTAGAGCGGGAAGGGAGAGTGTGTAAGATGGTGTGTACGGCCAAG GGTTAA |
Gene | >Hirsu2|4312 ATGAAGCTTGCGGCAGCGGTCGTGGGGACTTGTGCTCCAGCCTTGAGCTTAGCGATTCAAATTGCTCTCGTCGAG TGGGTGATTGATACTTCTCCTCCTGACGGTCTTGACGAGGTGACATTTCCCATCAACATGGCCAACTCACCTCAT CGGGAAGGCTACTACTTCGCACAAGCGTTCAGATTCCAGAACGTCAACGAGATTGGATATACTGGTCTTCAGCCA AGGCCCGACTCCGATGGCAGAAGCATCATCCACGCTGCATTTTCGTCGTTCCAGAACGGCACCACAACCTCCCAC TCGCAGTGCTACGATGGTGCAGACGGAGGCCCGGGCGTGAGCTGTGCACTTGAAATCGACGGTGACTACAGCCAC ACGTATAATCTTGTCGTGAGGAACATCCGTGGTGATACTTGGAGGGGGACTCTGGTTGATGCTGTGACGGGCGAA CGTCATGTTATCGGCCAATGGACACTGCCGCCGGGATCTGGCAAGATTGGGGGAACCGAGGTCGGGTTTGTCGAA TATTACCTCTCGGATGTGCCCCCATCGGTCTCTTGCAACGACGTGCCCGAGGCAGAGGTGACCTTTGGCATTCCG ACCTCCGGGACGGGTGGCGCGGCCTACTTCAGCAAGTGGTACGAGCATGAGAAATGGCCGTGCCAAGGCGACGAC AGTGGATATGAAGCGACGAATACTGCCTCGGGTTTGAATGTTAAAGTCGGCTTCTCACGCGGCACCGGCGATATC ACAGGCTCCGACCCGGCCTCAGAAAGCCAAGAATCATCTCAAGCAAGCGGTGAGGATACAGAAACCGCGCCACAA CATGAAACAGACGCGGCTGAGGATGTGGTTGTAGAGCGGGAAGGGAGAGTGTGTAAGATGGTGTGTACGGCCAAG GGTTAA |