Protein ID | Hirsu2|4307 |
Gene name | |
Location | Contig_220:15859..16980 |
Strand | + |
Gene length (bp) | 1121 |
Transcript length (bp) | 822 |
Coding sequence length (bp) | 822 |
Protein length (aa) | 274 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04991 | LicD | LicD family | 1.3E-16 | 81 | 184 |
PF04991 | LicD | LicD family | 3.1E-06 | 198 | 237 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P36044|MNN4_YEAST | Protein MNN4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNN4 PE=4 SV=2 | 22 | 182 | 4.0E-15 |
sp|P40355|YJ31_YEAST | Uncharacterized protein YJR061W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJR061W PE=4 SV=2 | 39 | 182 | 8.0E-13 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.2013 | 0.0752 | 0.7499 | 0.0947 | 0.1229 | 0.0201 | 0.3819 | 0.3002 | 0.1894 | 0.0064 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 27 | 0.999675 |
Orthofinder run ID | 4 |
Orthogroup | 2732 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|4307 MKSLSLCATLLLLVAAAQPAIPALSRRDPVPVDEDRYPEPKYFKEARGYAHYDARYMVEPLDEEPHHHVIRILIQ TYLATCRGLGIQTWLMHGSLLGWWWGKKVMPWDFDADVQVTEADLYYLAAYHNMTIYYYKYGRMSKGRYFLLDVN PHFKHRETDDTLNLIDARWIDMATGLFIDITAARYHLDHPAGQGIMYDKDGHEFRDTYVYPLRNTTFEGVEAMIP FRYKEMLESEYGKEALASKEFHGHVFHDERMQWVLAPPKAVGAADGED* |
Coding | >Hirsu2|4307 ATGAAGAGCCTTTCGCTGTGCGCCACGCTGCTGTTGCTGGTCGCGGCGGCGCAGCCTGCTATCCCGGCCCTCTCG CGGAGGGACCCGGTGCCTGTCGATGAGGATCGGTACCCCGAACCCAAATACTTTAAGGAAGCCCGCGGCTACGCC CACTACGATGCCCGCTACATGGTCGAGCCGCTCGACGAGGAGCCTCACCACCACGTCATCCGCATCCTGATCCAG ACCTATCTCGCCACCTGTCGAGGGCTCGGCATCCAGACCTGGCTCATGCACGGGAGCCTGCTCGGCTGGTGGTGG GGGAAGAAGGTCATGCCCTGGGATTTCGACGCCGACGTGCAGGTGACCGAGGCCGACCTGTACTACCTGGCCGCC TACCACAACATGACCATCTACTACTACAAGTACGGCCGCATGTCCAAGGGCCGCTACTTTCTCCTCGACGTCAAC CCCCACTTCAAGCACCGCGAGACGGACGACACGCTCAACCTGATCGATGCGCGCTGGATCGACATGGCCACGGGG CTCTTCATCGACATCACCGCCGCCAGGTACCATCTCGACCACCCGGCCGGCCAGGGAATCATGTATGACAAGGAC GGCCACGAGTTCCGAGATACGTACGTCTACCCACTGAGGAACACGACATTCGAAGGCGTCGAGGCCATGATCCCC TTCCGCTACAAGGAGATGCTCGAGTCCGAGTACGGCAAGGAGGCCCTGGCCAGCAAGGAGTTCCACGGCCACGTT TTCCACGACGAACGCATGCAGTGGGTGCTTGCGCCGCCCAAGGCGGTGGGCGCCGCGGACGGGGAGGATTGA |
Transcript | >Hirsu2|4307 ATGAAGAGCCTTTCGCTGTGCGCCACGCTGCTGTTGCTGGTCGCGGCGGCGCAGCCTGCTATCCCGGCCCTCTCG CGGAGGGACCCGGTGCCTGTCGATGAGGATCGGTACCCCGAACCCAAATACTTTAAGGAAGCCCGCGGCTACGCC CACTACGATGCCCGCTACATGGTCGAGCCGCTCGACGAGGAGCCTCACCACCACGTCATCCGCATCCTGATCCAG ACCTATCTCGCCACCTGTCGAGGGCTCGGCATCCAGACCTGGCTCATGCACGGGAGCCTGCTCGGCTGGTGGTGG GGGAAGAAGGTCATGCCCTGGGATTTCGACGCCGACGTGCAGGTGACCGAGGCCGACCTGTACTACCTGGCCGCC TACCACAACATGACCATCTACTACTACAAGTACGGCCGCATGTCCAAGGGCCGCTACTTTCTCCTCGACGTCAAC CCCCACTTCAAGCACCGCGAGACGGACGACACGCTCAACCTGATCGATGCGCGCTGGATCGACATGGCCACGGGG CTCTTCATCGACATCACCGCCGCCAGGTACCATCTCGACCACCCGGCCGGCCAGGGAATCATGTATGACAAGGAC GGCCACGAGTTCCGAGATACGTACGTCTACCCACTGAGGAACACGACATTCGAAGGCGTCGAGGCCATGATCCCC TTCCGCTACAAGGAGATGCTCGAGTCCGAGTACGGCAAGGAGGCCCTGGCCAGCAAGGAGTTCCACGGCCACGTT TTCCACGACGAACGCATGCAGTGGGTGCTTGCGCCGCCCAAGGCGGTGGGCGCCGCGGACGGGGAGGATTGA |
Gene | >Hirsu2|4307 ATGAAGAGCCTTTCGCTGTGCGCCACGCTGCTGTTGCTGGTCGCGGCGGCGCAGCCTGCTATCCCGGCCCTCTCG CGGAGGGACCCGGTGCCTGTCGATGAGGATCGGTACCCCGAACCCAAATACTTTAGTGAGTCCACCCATCCCTCC TGCATGCCCCGTATTCGCCGGCTAATGGTGTCACACGCAGAGGAAGCCCGGTACGAGCCCCGTCCCGTCCAACGC CCAGCCTCTTTCGGCTGCTGACACGACGAAGCGGCTACGCCCACTACGATGCCCGCTACATGGTCGAGCCGCTCG ACGAGGAGCCTCACCACCACGTCATCCGCATCCTGATCCAGACCTATCTCGCCACCTGTCGAGGGCTCGGCATCC AGACCTGGCTCATGCACGGGAGCCTGCTCGGCTGGTGGTGGGGGAAGAAGGCAGGGCGACCTCTCCGTATGCGCC CACGATGGGACCCGCTGACGCTCCGCATCCGCAGGTCATGCCCTGGGATTTCGACGCCGACGTGCAGGTGACCGA GGCCGACCTGTACTACCTGGCCGCCTACCACAACATGACCATCTACTACTACAAGTACGGCCGCATGTCCAAGGG CCGCTACTTTCTCCTCGACGTCAACCCCCACTTCAAGCACCGCGAGACGGACGACACGCTCAACCTGATCGATGC GCGCTGGATCGACATGGCCACGGGGCTCTTCATCGACATCACCGCCGCCAGGTACCATCTCGACCACCCGGCCGG CCAGGGAATCATGTATGACAAGGACGGCCACGAGTTCCGAGTACGTGTCTGGCCAGGCAGGAGGCTGGGAGAGGA GGAGGCTCGGGGTGACTGACAGATGAGCACGCCAGGATACGTACGTCTACCCACTGAGGAACACGACATTCGAAG GCGTCGAGGCCATGATCCCCTTCCGCTACAAGGAGATGCTCGAGTCCGAGTACGGCAAGGAGGCCCTGGCCAGCA AGGAGTTCCACGGGTACGTGGCCGCTCCGTCCACGGCCGAGACTTGACTGACCACGCTCTTTCGCAGCCACGTTT TCCACGACGAACGCATGCAGTGGGTGCTTGCGCCGCCCAAGGCGGTGGGCGCCGCGGACGGGGAGGATTGA |