Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4307
Gene name
LocationContig_220:15859..16980
Strand+
Gene length (bp)1121
Transcript length (bp)822
Coding sequence length (bp)822
Protein length (aa) 274

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04991 LicD LicD family 1.3E-16 81 184
PF04991 LicD LicD family 3.1E-06 198 237

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P36044|MNN4_YEAST Protein MNN4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNN4 PE=4 SV=2 22 182 4.0E-15
sp|P40355|YJ31_YEAST Uncharacterized protein YJR061W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJR061W PE=4 SV=2 39 182 8.0E-13

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4307
MKSLSLCATLLLLVAAAQPAIPALSRRDPVPVDEDRYPEPKYFKEARGYAHYDARYMVEPLDEEPHHHVIRILIQ
TYLATCRGLGIQTWLMHGSLLGWWWGKKVMPWDFDADVQVTEADLYYLAAYHNMTIYYYKYGRMSKGRYFLLDVN
PHFKHRETDDTLNLIDARWIDMATGLFIDITAARYHLDHPAGQGIMYDKDGHEFRDTYVYPLRNTTFEGVEAMIP
FRYKEMLESEYGKEALASKEFHGHVFHDERMQWVLAPPKAVGAADGED*
Coding >Hirsu2|4307
ATGAAGAGCCTTTCGCTGTGCGCCACGCTGCTGTTGCTGGTCGCGGCGGCGCAGCCTGCTATCCCGGCCCTCTCG
CGGAGGGACCCGGTGCCTGTCGATGAGGATCGGTACCCCGAACCCAAATACTTTAAGGAAGCCCGCGGCTACGCC
CACTACGATGCCCGCTACATGGTCGAGCCGCTCGACGAGGAGCCTCACCACCACGTCATCCGCATCCTGATCCAG
ACCTATCTCGCCACCTGTCGAGGGCTCGGCATCCAGACCTGGCTCATGCACGGGAGCCTGCTCGGCTGGTGGTGG
GGGAAGAAGGTCATGCCCTGGGATTTCGACGCCGACGTGCAGGTGACCGAGGCCGACCTGTACTACCTGGCCGCC
TACCACAACATGACCATCTACTACTACAAGTACGGCCGCATGTCCAAGGGCCGCTACTTTCTCCTCGACGTCAAC
CCCCACTTCAAGCACCGCGAGACGGACGACACGCTCAACCTGATCGATGCGCGCTGGATCGACATGGCCACGGGG
CTCTTCATCGACATCACCGCCGCCAGGTACCATCTCGACCACCCGGCCGGCCAGGGAATCATGTATGACAAGGAC
GGCCACGAGTTCCGAGATACGTACGTCTACCCACTGAGGAACACGACATTCGAAGGCGTCGAGGCCATGATCCCC
TTCCGCTACAAGGAGATGCTCGAGTCCGAGTACGGCAAGGAGGCCCTGGCCAGCAAGGAGTTCCACGGCCACGTT
TTCCACGACGAACGCATGCAGTGGGTGCTTGCGCCGCCCAAGGCGGTGGGCGCCGCGGACGGGGAGGATTGA
Transcript >Hirsu2|4307
ATGAAGAGCCTTTCGCTGTGCGCCACGCTGCTGTTGCTGGTCGCGGCGGCGCAGCCTGCTATCCCGGCCCTCTCG
CGGAGGGACCCGGTGCCTGTCGATGAGGATCGGTACCCCGAACCCAAATACTTTAAGGAAGCCCGCGGCTACGCC
CACTACGATGCCCGCTACATGGTCGAGCCGCTCGACGAGGAGCCTCACCACCACGTCATCCGCATCCTGATCCAG
ACCTATCTCGCCACCTGTCGAGGGCTCGGCATCCAGACCTGGCTCATGCACGGGAGCCTGCTCGGCTGGTGGTGG
GGGAAGAAGGTCATGCCCTGGGATTTCGACGCCGACGTGCAGGTGACCGAGGCCGACCTGTACTACCTGGCCGCC
TACCACAACATGACCATCTACTACTACAAGTACGGCCGCATGTCCAAGGGCCGCTACTTTCTCCTCGACGTCAAC
CCCCACTTCAAGCACCGCGAGACGGACGACACGCTCAACCTGATCGATGCGCGCTGGATCGACATGGCCACGGGG
CTCTTCATCGACATCACCGCCGCCAGGTACCATCTCGACCACCCGGCCGGCCAGGGAATCATGTATGACAAGGAC
GGCCACGAGTTCCGAGATACGTACGTCTACCCACTGAGGAACACGACATTCGAAGGCGTCGAGGCCATGATCCCC
TTCCGCTACAAGGAGATGCTCGAGTCCGAGTACGGCAAGGAGGCCCTGGCCAGCAAGGAGTTCCACGGCCACGTT
TTCCACGACGAACGCATGCAGTGGGTGCTTGCGCCGCCCAAGGCGGTGGGCGCCGCGGACGGGGAGGATTGA
Gene >Hirsu2|4307
ATGAAGAGCCTTTCGCTGTGCGCCACGCTGCTGTTGCTGGTCGCGGCGGCGCAGCCTGCTATCCCGGCCCTCTCG
CGGAGGGACCCGGTGCCTGTCGATGAGGATCGGTACCCCGAACCCAAATACTTTAGTGAGTCCACCCATCCCTCC
TGCATGCCCCGTATTCGCCGGCTAATGGTGTCACACGCAGAGGAAGCCCGGTACGAGCCCCGTCCCGTCCAACGC
CCAGCCTCTTTCGGCTGCTGACACGACGAAGCGGCTACGCCCACTACGATGCCCGCTACATGGTCGAGCCGCTCG
ACGAGGAGCCTCACCACCACGTCATCCGCATCCTGATCCAGACCTATCTCGCCACCTGTCGAGGGCTCGGCATCC
AGACCTGGCTCATGCACGGGAGCCTGCTCGGCTGGTGGTGGGGGAAGAAGGCAGGGCGACCTCTCCGTATGCGCC
CACGATGGGACCCGCTGACGCTCCGCATCCGCAGGTCATGCCCTGGGATTTCGACGCCGACGTGCAGGTGACCGA
GGCCGACCTGTACTACCTGGCCGCCTACCACAACATGACCATCTACTACTACAAGTACGGCCGCATGTCCAAGGG
CCGCTACTTTCTCCTCGACGTCAACCCCCACTTCAAGCACCGCGAGACGGACGACACGCTCAACCTGATCGATGC
GCGCTGGATCGACATGGCCACGGGGCTCTTCATCGACATCACCGCCGCCAGGTACCATCTCGACCACCCGGCCGG
CCAGGGAATCATGTATGACAAGGACGGCCACGAGTTCCGAGTACGTGTCTGGCCAGGCAGGAGGCTGGGAGAGGA
GGAGGCTCGGGGTGACTGACAGATGAGCACGCCAGGATACGTACGTCTACCCACTGAGGAACACGACATTCGAAG
GCGTCGAGGCCATGATCCCCTTCCGCTACAAGGAGATGCTCGAGTCCGAGTACGGCAAGGAGGCCCTGGCCAGCA
AGGAGTTCCACGGGTACGTGGCCGCTCCGTCCACGGCCGAGACTTGACTGACCACGCTCTTTCGCAGCCACGTTT
TCCACGACGAACGCATGCAGTGGGTGCTTGCGCCGCCCAAGGCGGTGGGCGCCGCGGACGGGGAGGATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail