Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|429
Gene name
LocationContig_1087:2219..2966
Strand+
Gene length (bp)747
Transcript length (bp)666
Coding sequence length (bp)666
Protein length (aa) 222

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 35 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 55 77 22
3 92 114 22
4 134 156 22
5 169 191 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|429
MFPEDTMPLQGTRFPKHSYSVTWLALMVLSAVLAFFVFIAALCQRRGGLDPARDWLKMFKIASAFFFHAVLLFIP
TGPEVLPGLKEKEVAQILAVATLLDRFAVFSVSLTLAGVANGIAAAHSGRSETSQRSAYLTGFFGLILILVNTAI
FIVAVIEASPVIELQQHMLIISTLAFVYLLSQLIFAVALLFRSALLVARAVSKPRLIRVGLPIHEMAIGCL*
Coding >Hirsu2|429
ATGTTTCCCGAAGACACCATGCCTCTCCAGGGCACCAGGTTTCCCAAACATAGCTACAGCGTGACTTGGCTCGCC
TTGATGGTCCTGTCGGCGGTCTTGGCCTTCTTCGTCTTTATCGCGGCCCTCTGCCAGAGACGGGGCGGCTTGGAT
CCCGCAAGAGATTGGCTCAAAATGTTCAAGATCGCCTCGGCTTTCTTCTTCCATGCCGTCCTTCTCTTCATCCCC
ACGGGACCTGAAGTTCTTCCCGGTTTGAAGGAGAAGGAAGTGGCGCAAATCTTGGCCGTCGCCACATTGCTCGAC
AGATTTGCCGTCTTCTCGGTGTCGCTCACTCTTGCCGGCGTCGCCAACGGCATCGCAGCTGCTCACTCTGGCCGG
TCGGAGACTAGCCAACGCTCTGCGTACTTGACTGGCTTCTTCGGTCTCATTCTAATTCTCGTCAATACAGCCATC
TTCATCGTTGCCGTGATAGAGGCCAGTCCCGTTATTGAACTACAGCAGCACATGCTGATCATTTCAACCTTGGCC
TTTGTCTACCTCTTGTCCCAACTTATCTTCGCTGTCGCACTGCTGTTCAGGTCCGCCCTTCTCGTGGCGCGTGCC
GTTTCGAAACCAAGGCTCATCAGGGTAGGCTTGCCCATCCACGAGATGGCCATTGGTTGCCTGTGA
Transcript >Hirsu2|429
ATGTTTCCCGAAGACACCATGCCTCTCCAGGGCACCAGGTTTCCCAAACATAGCTACAGCGTGACTTGGCTCGCC
TTGATGGTCCTGTCGGCGGTCTTGGCCTTCTTCGTCTTTATCGCGGCCCTCTGCCAGAGACGGGGCGGCTTGGAT
CCCGCAAGAGATTGGCTCAAAATGTTCAAGATCGCCTCGGCTTTCTTCTTCCATGCCGTCCTTCTCTTCATCCCC
ACGGGACCTGAAGTTCTTCCCGGTTTGAAGGAGAAGGAAGTGGCGCAAATCTTGGCCGTCGCCACATTGCTCGAC
AGATTTGCCGTCTTCTCGGTGTCGCTCACTCTTGCCGGCGTCGCCAACGGCATCGCAGCTGCTCACTCTGGCCGG
TCGGAGACTAGCCAACGCTCTGCGTACTTGACTGGCTTCTTCGGTCTCATTCTAATTCTCGTCAATACAGCCATC
TTCATCGTTGCCGTGATAGAGGCCAGTCCCGTTATTGAACTACAGCAGCACATGCTGATCATTTCAACCTTGGCC
TTTGTCTACCTCTTGTCCCAACTTATCTTCGCTGTCGCACTGCTGTTCAGGTCCGCCCTTCTCGTGGCGCGTGCC
GTTTCGAAACCAAGGCTCATCAGGGTAGGCTTGCCCATCCACGAGATGGCCATTGGTTGCCTGTGA
Gene >Hirsu2|429
ATGTTTCCCGAAGACACCATGCCTCTCCAGGGCACCAGGTTTCCCAAACATAGCTACAGCGTGACTTGGCTCGCC
TTGATGGTCCTGTCGGCGGTCTTGGCCTTCTTCGTCTTTATCGCGGCCCTCTGCCAGAGACGGGGCGGCTTGGAT
CCCGCAAGAGATTGGCTCAAAATGTTCAAGATCGCCTCGGCTTTCTTCTTCCAGTACGGCTGCCCAGCTCCCCAT
CTTCCGTTGCTATCCCGGCCTTAGCTGACCCTGGGATTGCGCTCATGTTTCATCCGCAGTGCCGTCCTTCTCTTC
ATCCCCACGGGACCTGAAGTTCTTCCCGGTTTGAAGGAGAAGGAAGTGGCGCAAATCTTGGCCGTCGCCACATTG
CTCGACAGATTTGCCGTCTTCTCGGTGTCGCTCACTCTTGCCGGCGTCGCCAACGGCATCGCAGCTGCTCACTCT
GGCCGGTCGGAGACTAGCCAACGCTCTGCGTACTTGACTGGCTTCTTCGGTCTCATTCTAATTCTCGTCAATACA
GCCATCTTCATCGTTGCCGTGATAGAGGCCAGTCCCGTTATTGAACTACAGCAGCACATGCTGATCATTTCAACC
TTGGCCTTTGTCTACCTCTTGTCCCAACTTATCTTCGCTGTCGCACTGCTGTTCAGGTCCGCCCTTCTCGTGGCG
CGTGCCGTTTCGAAACCAAGGCTCATCAGGGTAGGCTTGCCCATCCACGAGATGGCCATTGGTTGCCTGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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