© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|429 |
| Gene name | |
| Location | Contig_1087:2219..2966 |
| Strand | + |
| Gene length (bp) | 747 |
| Transcript length (bp) | 666 |
| Coding sequence length (bp) | 666 |
| Protein length (aa) | 222 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 35 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 42 | 22 |
| 2 | 55 | 77 | 22 |
| 3 | 92 | 114 | 22 |
| 4 | 134 | 156 | 22 |
| 5 | 169 | 191 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|429 MFPEDTMPLQGTRFPKHSYSVTWLALMVLSAVLAFFVFIAALCQRRGGLDPARDWLKMFKIASAFFFHAVLLFIP TGPEVLPGLKEKEVAQILAVATLLDRFAVFSVSLTLAGVANGIAAAHSGRSETSQRSAYLTGFFGLILILVNTAI FIVAVIEASPVIELQQHMLIISTLAFVYLLSQLIFAVALLFRSALLVARAVSKPRLIRVGLPIHEMAIGCL* |
| Coding | >Hirsu2|429 ATGTTTCCCGAAGACACCATGCCTCTCCAGGGCACCAGGTTTCCCAAACATAGCTACAGCGTGACTTGGCTCGCC TTGATGGTCCTGTCGGCGGTCTTGGCCTTCTTCGTCTTTATCGCGGCCCTCTGCCAGAGACGGGGCGGCTTGGAT CCCGCAAGAGATTGGCTCAAAATGTTCAAGATCGCCTCGGCTTTCTTCTTCCATGCCGTCCTTCTCTTCATCCCC ACGGGACCTGAAGTTCTTCCCGGTTTGAAGGAGAAGGAAGTGGCGCAAATCTTGGCCGTCGCCACATTGCTCGAC AGATTTGCCGTCTTCTCGGTGTCGCTCACTCTTGCCGGCGTCGCCAACGGCATCGCAGCTGCTCACTCTGGCCGG TCGGAGACTAGCCAACGCTCTGCGTACTTGACTGGCTTCTTCGGTCTCATTCTAATTCTCGTCAATACAGCCATC TTCATCGTTGCCGTGATAGAGGCCAGTCCCGTTATTGAACTACAGCAGCACATGCTGATCATTTCAACCTTGGCC TTTGTCTACCTCTTGTCCCAACTTATCTTCGCTGTCGCACTGCTGTTCAGGTCCGCCCTTCTCGTGGCGCGTGCC GTTTCGAAACCAAGGCTCATCAGGGTAGGCTTGCCCATCCACGAGATGGCCATTGGTTGCCTGTGA |
| Transcript | >Hirsu2|429 ATGTTTCCCGAAGACACCATGCCTCTCCAGGGCACCAGGTTTCCCAAACATAGCTACAGCGTGACTTGGCTCGCC TTGATGGTCCTGTCGGCGGTCTTGGCCTTCTTCGTCTTTATCGCGGCCCTCTGCCAGAGACGGGGCGGCTTGGAT CCCGCAAGAGATTGGCTCAAAATGTTCAAGATCGCCTCGGCTTTCTTCTTCCATGCCGTCCTTCTCTTCATCCCC ACGGGACCTGAAGTTCTTCCCGGTTTGAAGGAGAAGGAAGTGGCGCAAATCTTGGCCGTCGCCACATTGCTCGAC AGATTTGCCGTCTTCTCGGTGTCGCTCACTCTTGCCGGCGTCGCCAACGGCATCGCAGCTGCTCACTCTGGCCGG TCGGAGACTAGCCAACGCTCTGCGTACTTGACTGGCTTCTTCGGTCTCATTCTAATTCTCGTCAATACAGCCATC TTCATCGTTGCCGTGATAGAGGCCAGTCCCGTTATTGAACTACAGCAGCACATGCTGATCATTTCAACCTTGGCC TTTGTCTACCTCTTGTCCCAACTTATCTTCGCTGTCGCACTGCTGTTCAGGTCCGCCCTTCTCGTGGCGCGTGCC GTTTCGAAACCAAGGCTCATCAGGGTAGGCTTGCCCATCCACGAGATGGCCATTGGTTGCCTGTGA |
| Gene | >Hirsu2|429 ATGTTTCCCGAAGACACCATGCCTCTCCAGGGCACCAGGTTTCCCAAACATAGCTACAGCGTGACTTGGCTCGCC TTGATGGTCCTGTCGGCGGTCTTGGCCTTCTTCGTCTTTATCGCGGCCCTCTGCCAGAGACGGGGCGGCTTGGAT CCCGCAAGAGATTGGCTCAAAATGTTCAAGATCGCCTCGGCTTTCTTCTTCCAGTACGGCTGCCCAGCTCCCCAT CTTCCGTTGCTATCCCGGCCTTAGCTGACCCTGGGATTGCGCTCATGTTTCATCCGCAGTGCCGTCCTTCTCTTC ATCCCCACGGGACCTGAAGTTCTTCCCGGTTTGAAGGAGAAGGAAGTGGCGCAAATCTTGGCCGTCGCCACATTG CTCGACAGATTTGCCGTCTTCTCGGTGTCGCTCACTCTTGCCGGCGTCGCCAACGGCATCGCAGCTGCTCACTCT GGCCGGTCGGAGACTAGCCAACGCTCTGCGTACTTGACTGGCTTCTTCGGTCTCATTCTAATTCTCGTCAATACA GCCATCTTCATCGTTGCCGTGATAGAGGCCAGTCCCGTTATTGAACTACAGCAGCACATGCTGATCATTTCAACC TTGGCCTTTGTCTACCTCTTGTCCCAACTTATCTTCGCTGTCGCACTGCTGTTCAGGTCCGCCCTTCTCGTGGCG CGTGCCGTTTCGAAACCAAGGCTCATCAGGGTAGGCTTGCCCATCCACGAGATGGCCATTGGTTGCCTGTGA |