© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4288 |
| Gene name | |
| Location | Contig_22:6367..7065 |
| Strand | + |
| Gene length (bp) | 698 |
| Transcript length (bp) | 549 |
| Coding sequence length (bp) | 549 |
| Protein length (aa) | 183 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.0827 | 0.0509 | 0.9584 | 0.0441 | 0.0464 | 0.0043 | 0.0872 | 0.077 | 0.1091 | 0.0028 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 28 | 0.999731 |
| Orthofinder run ID | 4 |
| Orthogroup | 9575 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|4288 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4288 MKTSTPLFACFIGLATASPLASTAIVNRDAACNPEHLKLHQELNGLFNEKLEYVEPIDCSYAIAGSLGDESDECK AKRRVDELDRDIAKKTEALSSENGDLATATSGPCNTEHLKLLQQINEMMREKISLFQPLYCVDLGAGYKLTEQCK TSLKGKEIDREIAKKTEALNVKSEDSNFVLEE* |
| Coding | >Hirsu2|4288 ATGAAGACCTCGACTCCCCTCTTCGCCTGTTTCATTGGATTGGCCACTGCGAGTCCTCTAGCAAGTACGGCCATT GTTAATCGAGATGCCGCGTGTAACCCCGAGCATTTGAAACTTCACCAAGAACTCAATGGACTGTTTAATGAAAAA CTCGAATACGTGGAGCCTATCGATTGTTCTTACGCTATAGCTGGATCGCTTGGCGATGAGTCCGACGAGTGTAAA GCAAAACGAAGGGTGGATGAACTTGACCGCGACATTGCGAAAAAGACCGAAGCGCTCAGCTCCGAGAACGGAGAT TTGGCGACAGCGACAAGTGGCCCATGCAACACTGAACATCTCAAACTTCTCCAACAAATCAACGAAATGATGCGA GAAAAAATCAGTCTTTTTCAGCCTTTGTATTGTGTTGACCTGGGGGCAGGTTATAAACTGACTGAACAATGCAAA ACGTCACTCAAGGGCAAGGAGATTGACCGCGAAATTGCGAAGAAAACTGAAGCACTCAACGTCAAGAGCGAAGAT TCCAATTTCGTCCTTGAAGAATAG |
| Transcript | >Hirsu2|4288 ATGAAGACCTCGACTCCCCTCTTCGCCTGTTTCATTGGATTGGCCACTGCGAGTCCTCTAGCAAGTACGGCCATT GTTAATCGAGATGCCGCGTGTAACCCCGAGCATTTGAAACTTCACCAAGAACTCAATGGACTGTTTAATGAAAAA CTCGAATACGTGGAGCCTATCGATTGTTCTTACGCTATAGCTGGATCGCTTGGCGATGAGTCCGACGAGTGTAAA GCAAAACGAAGGGTGGATGAACTTGACCGCGACATTGCGAAAAAGACCGAAGCGCTCAGCTCCGAGAACGGAGAT TTGGCGACAGCGACAAGTGGCCCATGCAACACTGAACATCTCAAACTTCTCCAACAAATCAACGAAATGATGCGA GAAAAAATCAGTCTTTTTCAGCCTTTGTATTGTGTTGACCTGGGGGCAGGTTATAAACTGACTGAACAATGCAAA ACGTCACTCAAGGGCAAGGAGATTGACCGCGAAATTGCGAAGAAAACTGAAGCACTCAACGTCAAGAGCGAAGAT TCCAATTTCGTCCTTGAAGAATAG |
| Gene | >Hirsu2|4288 ATGAAGACCTCGACTCCCCTCTTCGCCTGTTTCATTGGATTGGCCACTGCGAGTCCTCTAGCAAGTACGGCCATT GTTAATCGAGATGCCGCGTGTAACCCCGAGCATTTGAAACTTCACCAAGAACTCAATGGACTGTTTAATGAAAAA CTCGAATACGTGGAGCCTATCGATTGTTCTTACGCTATAGCTGGATCGCTTGGCGATGAGTCCGACGAGTGTAAA GCAAAACGAAGGGTGGATGAACTTGACCGCGACATTGCGAAAAAGGTAAGTGGGAACTCCTATCCTCCTGGTCAG CAGGCTATTATGACCACCACGCTAATATGACGTGCCACTATAGACCGAAGCGCTCAGCTCCGAGAACGGAGATTT GGCGACAGCGACAAGTGGCCCATGCAACACTGAACATCTCAAACTTCTCCAACAAATCAACGAAATGATGCGAGA AAAAATCAGTCTTTTTCAGCCTTTGTATTGTGTTGACCTGGGGGCAGGTTATAAACTGACTGAACAATGCAAAAC GTCACTCAAGGGCAAGGAGATTGACCGCGAAATTGCGAAGAAAGTAAGCGGGAACTCCTATGCTCCTACGTAGTC AGCAGGCTATCATGAGCACCACGCTAATGTTACATGCTGTCCAGACTGAAGCACTCAACGTCAAGAGCGAAGATT CCAATTTCGTCCTTGAAGAATAG |