© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4281 |
| Gene name | |
| Location | Contig_2198:751..1537 |
| Strand | - |
| Gene length (bp) | 786 |
| Transcript length (bp) | 786 |
| Coding sequence length (bp) | 786 |
| Protein length (aa) | 262 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.2026 | 0.0883 | 0.9148 | 0.1817 | 0.0785 | 0.0497 | 0.2215 | 0.4657 | 0.3662 | 0.0073 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 21 | 0.999702 |
| Orthofinder run ID | 4 |
| Orthogroup | 5230 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4281 MLGPWMILLGLALGCSAATKAASPESTVSMTVEMLQAAMGNVNLANPPYYEDGAQTEPTCTRHLGRCARTSFWTR HVMAARPANVTIKTKTHVDAELINTGTREAKIKSTRSLALAHGTSKGWTIGARASLTDVAAIPSKGEVSASFSDE TTSATTETQEVEYDAVCPAGSLCRIQTITFSATLEGRCRPEPFLACRGDVGNVCDKGPQIGRECRQYRAYFDKHG CRDRSVVETEPCSVDVQLRDENGGLLKVIVVSESTY* |
| Coding | >Hirsu2|4281 ATGCTCGGCCCGTGGATGATACTGCTCGGCCTCGCGCTCGGCTGCTCGGCCGCGACCAAGGCGGCGTCGCCCGAG TCGACGGTCAGCATGACGGTCGAGATGCTGCAGGCGGCCATGGGCAACGTCAACCTGGCCAACCCGCCGTACTAC GAGGACGGGGCGCAGACGGAGCCGACGTGCACGCGGCACCTGGGCCGCTGCGCGCGGACGAGCTTCTGGACGCGG CACGTCATGGCGGCGCGGCCGGCCAACGTGACGATCAAGACCAAGACGCACGTGGACGCGGAGTTGATCAACACG GGCACGCGCGAGGCCAAGATCAAGTCGACGCGCTCGCTGGCCCTCGCGCACGGGACCTCCAAGGGCTGGACCATC GGCGCGCGCGCCTCGCTGACGGACGTGGCCGCCATCCCCAGCAAGGGCGAGGTCTCGGCCTCGTTCAGCGACGAG ACGACGAGCGCGACGACGGAGACGCAGGAGGTCGAGTACGACGCCGTCTGCCCGGCCGGCTCGCTGTGCCGCATC CAGACCATCACCTTCTCCGCCACGCTCGAGGGCCGGTGCCGGCCCGAGCCGTTCCTGGCCTGCCGCGGCGACGTC GGCAACGTCTGCGACAAGGGGCCGCAGATCGGCCGGGAGTGCCGCCAGTACCGCGCCTACTTTGATAAGCACGGC TGTCGTGACCGGTCCGTCGTTGAGACGGAGCCGTGCTCGGTGGACGTGCAGCTGCGGGACGAGAACGGCGGCCTG CTCAAGGTCATTGTCGTCTCGGAGAGTACGTACTAG |
| Transcript | >Hirsu2|4281 ATGCTCGGCCCGTGGATGATACTGCTCGGCCTCGCGCTCGGCTGCTCGGCCGCGACCAAGGCGGCGTCGCCCGAG TCGACGGTCAGCATGACGGTCGAGATGCTGCAGGCGGCCATGGGCAACGTCAACCTGGCCAACCCGCCGTACTAC GAGGACGGGGCGCAGACGGAGCCGACGTGCACGCGGCACCTGGGCCGCTGCGCGCGGACGAGCTTCTGGACGCGG CACGTCATGGCGGCGCGGCCGGCCAACGTGACGATCAAGACCAAGACGCACGTGGACGCGGAGTTGATCAACACG GGCACGCGCGAGGCCAAGATCAAGTCGACGCGCTCGCTGGCCCTCGCGCACGGGACCTCCAAGGGCTGGACCATC GGCGCGCGCGCCTCGCTGACGGACGTGGCCGCCATCCCCAGCAAGGGCGAGGTCTCGGCCTCGTTCAGCGACGAG ACGACGAGCGCGACGACGGAGACGCAGGAGGTCGAGTACGACGCCGTCTGCCCGGCCGGCTCGCTGTGCCGCATC CAGACCATCACCTTCTCCGCCACGCTCGAGGGCCGGTGCCGGCCCGAGCCGTTCCTGGCCTGCCGCGGCGACGTC GGCAACGTCTGCGACAAGGGGCCGCAGATCGGCCGGGAGTGCCGCCAGTACCGCGCCTACTTTGATAAGCACGGC TGTCGTGACCGGTCCGTCGTTGAGACGGAGCCGTGCTCGGTGGACGTGCAGCTGCGGGACGAGAACGGCGGCCTG CTCAAGGTCATTGTCGTCTCGGAGAGTACGTACTAG |
| Gene | >Hirsu2|4281 ATGCTCGGCCCGTGGATGATACTGCTCGGCCTCGCGCTCGGCTGCTCGGCCGCGACCAAGGCGGCGTCGCCCGAG TCGACGGTCAGCATGACGGTCGAGATGCTGCAGGCGGCCATGGGCAACGTCAACCTGGCCAACCCGCCGTACTAC GAGGACGGGGCGCAGACGGAGCCGACGTGCACGCGGCACCTGGGCCGCTGCGCGCGGACGAGCTTCTGGACGCGG CACGTCATGGCGGCGCGGCCGGCCAACGTGACGATCAAGACCAAGACGCACGTGGACGCGGAGTTGATCAACACG GGCACGCGCGAGGCCAAGATCAAGTCGACGCGCTCGCTGGCCCTCGCGCACGGGACCTCCAAGGGCTGGACCATC GGCGCGCGCGCCTCGCTGACGGACGTGGCCGCCATCCCCAGCAAGGGCGAGGTCTCGGCCTCGTTCAGCGACGAG ACGACGAGCGCGACGACGGAGACGCAGGAGGTCGAGTACGACGCCGTCTGCCCGGCCGGCTCGCTGTGCCGCATC CAGACCATCACCTTCTCCGCCACGCTCGAGGGCCGGTGCCGGCCCGAGCCGTTCCTGGCCTGCCGCGGCGACGTC GGCAACGTCTGCGACAAGGGGCCGCAGATCGGCCGGGAGTGCCGCCAGTACCGCGCCTACTTTGATAAGCACGGC TGTCGTGACCGGTCCGTCGTTGAGACGGAGCCGTGCTCGGTGGACGTGCAGCTGCGGGACGAGAACGGCGGCCTG CTCAAGGTCATTGTCGTCTCGGAGAGTACGTACTAG |