© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4269 |
| Gene name | |
| Location | Contig_2190:350..1650 |
| Strand | - |
| Gene length (bp) | 1300 |
| Transcript length (bp) | 1110 |
| Coding sequence length (bp) | 1110 |
| Protein length (aa) | 370 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10361 | DUF2434 | Protein of unknown function (DUF2434) | 2.8E-130 | 55 | 349 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10260|YD2C_SCHPO | Uncharacterized protein C56F8.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC56F8.12 PE=4 SV=1 | 48 | 367 | 7.0E-20 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 101 | 123 | 22 |
| 2 | 143 | 165 | 22 |
| 3 | 175 | 197 | 22 |
| 4 | 224 | 246 | 22 |
| 5 | 274 | 296 | 22 |
| 6 | 317 | 339 | 22 |
| 7 | 349 | 368 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4269 MVAPLLPELLPALAGRSLTGRDLLAFPGGDNETDTVFGGVHFNLTTLRFWNYTYYSNQTLSNGTKCWLTFPPYQP HELLTNGTFVNATKCWTALDPIGTRGVTGIVFAALYGLGLVMTLAALAKHGALYLPKEKRFFPIGRRWQWYWGGF VGACALIGLLSNIDIDRYYVQELPIVLTSFFWFLLCQGTMALTWEAVRHWGSWLERQYVDPNPFIYRQDDRRAMI EFWMPLWFYFWVWMNFFLVVPRSWKFAEKQRSPDQTRDVAIPAATGGRFKGAAVCLVIAWLTILFSLRHSVQHYK PRNRGLANRVVGLARALPVRFMFMIPLCLAMIIYQIVIAFVWDLSVMRYRGVVPIIFAWGYGPPLLIMS* |
| Coding | >Hirsu2|4269 ATGGTGGCACCACTGCTGCCCGAGCTGCTGCCCGCGCTGGCCGGCCGCTCGCTGACCGGCCGCGACCTGCTGGCG TTCCCCGGCGGCGACAACGAGACGGACACGGTCTTTGGCGGCGTGCACTTCAACCTGACGACGCTGCGCTTCTGG AACTACACCTACTACAGCAACCAGACGCTGTCCAACGGCACCAAGTGCTGGCTGACGTTCCCGCCGTACCAGCCG CACGAGCTGCTGACCAACGGCACCTTCGTCAACGCGACCAAGTGCTGGACGGCGCTCGACCCCATCGGCACCCGC GGCGTCACCGGCATCGTCTTCGCCGCCCTCTACGGCCTCGGCCTGGTCATGACGCTGGCCGCGCTGGCCAAGCAC GGCGCGCTGTACCTGCCCAAGGAGAAGCGCTTCTTCCCCATCGGCCGGCGCTGGCAGTGGTACTGGGGCGGCTTC GTCGGCGCCTGCGCCCTCATCGGCCTGCTCTCCAACATCGACATCGACCGCTACTACGTCCAGGAGCTGCCCATC GTCCTCACCAGCTTCTTCTGGTTCCTGCTCTGCCAGGGCACCATGGCCCTGACCTGGGAGGCCGTCCGCCACTGG GGCAGCTGGCTGGAGCGCCAGTATGTCGACCCGAACCCGTTCATCTATCGCCAGGACGACCGCCGGGCCATGATT GAGTTTTGGATGCCGCTCTGGTTCTACTTTTGGGTCTGGATGAACTTCTTCCTCGTCGTCCCGCGCAGCTGGAAG TTTGCCGAGAAGCAGCGGTCGCCGGACCAGACGCGCGACGTGGCGATCCCGGCGGCGACGGGCGGCCGGTTCAAG GGCGCGGCCGTGTGCCTCGTCATCGCCTGGCTCACCATCCTCTTCTCGCTGCGGCACTCGGTGCAGCACTACAAG CCGCGCAACCGCGGGCTGGCCAACCGGGTGGTGGGCCTGGCGCGGGCGCTGCCGGTGCGCTTCATGTTCATGATC CCGCTGTGCCTGGCCATGATCATCTACCAGATCGTCATCGCCTTCGTCTGGGACCTGTCGGTGATGCGGTACCGC GGCGTGGTGCCCATCATCTTCGCCTGGGGCTACGGCCCGCCGCTGCTGATCATGAGCTGA |
| Transcript | >Hirsu2|4269 ATGGTGGCACCACTGCTGCCCGAGCTGCTGCCCGCGCTGGCCGGCCGCTCGCTGACCGGCCGCGACCTGCTGGCG TTCCCCGGCGGCGACAACGAGACGGACACGGTCTTTGGCGGCGTGCACTTCAACCTGACGACGCTGCGCTTCTGG AACTACACCTACTACAGCAACCAGACGCTGTCCAACGGCACCAAGTGCTGGCTGACGTTCCCGCCGTACCAGCCG CACGAGCTGCTGACCAACGGCACCTTCGTCAACGCGACCAAGTGCTGGACGGCGCTCGACCCCATCGGCACCCGC GGCGTCACCGGCATCGTCTTCGCCGCCCTCTACGGCCTCGGCCTGGTCATGACGCTGGCCGCGCTGGCCAAGCAC GGCGCGCTGTACCTGCCCAAGGAGAAGCGCTTCTTCCCCATCGGCCGGCGCTGGCAGTGGTACTGGGGCGGCTTC GTCGGCGCCTGCGCCCTCATCGGCCTGCTCTCCAACATCGACATCGACCGCTACTACGTCCAGGAGCTGCCCATC GTCCTCACCAGCTTCTTCTGGTTCCTGCTCTGCCAGGGCACCATGGCCCTGACCTGGGAGGCCGTCCGCCACTGG GGCAGCTGGCTGGAGCGCCAGTATGTCGACCCGAACCCGTTCATCTATCGCCAGGACGACCGCCGGGCCATGATT GAGTTTTGGATGCCGCTCTGGTTCTACTTTTGGGTCTGGATGAACTTCTTCCTCGTCGTCCCGCGCAGCTGGAAG TTTGCCGAGAAGCAGCGGTCGCCGGACCAGACGCGCGACGTGGCGATCCCGGCGGCGACGGGCGGCCGGTTCAAG GGCGCGGCCGTGTGCCTCGTCATCGCCTGGCTCACCATCCTCTTCTCGCTGCGGCACTCGGTGCAGCACTACAAG CCGCGCAACCGCGGGCTGGCCAACCGGGTGGTGGGCCTGGCGCGGGCGCTGCCGGTGCGCTTCATGTTCATGATC CCGCTGTGCCTGGCCATGATCATCTACCAGATCGTCATCGCCTTCGTCTGGGACCTGTCGGTGATGCGGTACCGC GGCGTGGTGCCCATCATCTTCGCCTGGGGCTACGGCCCGCCGCTGCTGATCATGAGCTGA |
| Gene | >Hirsu2|4269 ATGGTGGCACCACTGCTGCCCGAGCTGCTGCCCGCGCTGGCCGGCCGCTCGCTGACCGGCCGCGACCTGCTGGCG TTCCCCGGCGGCGACAACGAGACGGACACGGTCTTTGGCGGCGTGCACTTCAACCTGACGACGCTGCGCTTCTGG AACTACACCTACTACAGCAACCAGACGCTGTCCAACGGCACCAAGTGCTGGCTGACGTTCCCGCCGTACCAGCCG CACGAGCTGCTGACCAACGGCACCTTCGTCAACGCGACCAAGTGCTGGACGGCGCTCGACCCCATCGGCACCCGC GGCGTCACCGGCATCGTCTTCGCCGCCCTCTACGGCCTCGGCCTGGTCATGACGCTGGCCGCGCTGGCCAAGCAC GGCGCGCTGTACCTGCCCAAGGAGAAGCGCTTCTTCCCCATCGGCCGGCGCTGGCAGTGGTACTGGGGCGGCTTC GTCGGCGCCTGCGCCCTCATCGGCCTGCTCTCCAACATCGACATCGACCGCTACTACGTCCAGGAGCTGCCCATC GTCCTCACCAGCTTCTTCTGGTTCCTGCTCTGCCAGGGCACCATGGCCCTGACCTGGGAGGCCGTCCGCCACTGG GGCAGCTGGCTGGAGCGCCAGTATGTCGACCCGAACCCGTTCATCTATCGCCAGGACGACCGCCGGGCCATGATT GAGTTTTGGATGCCGCTCTGGTTCTACTTTTGGGTCTGGATGGTACGTCTTTTCTCCTCGTCTTCCTTCCTCTCT CCCTCTCTCCCTCTCTCCCTCTCTCACTCCCTCACTCGTGTGTGTGAGTATGCGTGCGTGTGTGTGTGTGGGTGT GCTGAAAAGTATGTATGCTCATGCCCGTCGCAACAGAACTTCTTCCTCGTCGTCCCGCGCAGCTGGAAGTTTGCC GAGAAGCAGCGGTCGCCGGACCAGACGCGCGACGTGGCGATCCCGGCGGCGACGGGCGGCCGGTTCAAGGGCGCG GCCGTGTGCCTCGTCATCGCCTGGCTCACCATCCTCTTCTCGCTGCGGCACTCGGTGCAGCACTACAAGCCGCGC AACCGCGGGCTGGCCAACCGGGTGGTGGGCCTGGCGCGGGCGCTGCCGGTGCGCTTCATGTTCATGATCCCGCTG TGCCTGGCCATGATCATCTACCAGATCGTCATCGCCTTCGTCTGGGACCTGTCGGTGATGCGGTACCGCGGCGTG GTGCCCATCATCTTCGCCTGGGGCTACGGCCCGCCGCTGCTGATCATGTACATCCAGCTGGCCTACGGCTTCTTC AGCCCCAACGAGGACAAGGAGCTGA |