Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4261
Gene name
LocationContig_219:11686..13834
Strand+
Gene length (bp)2148
Transcript length (bp)1656
Coding sequence length (bp)1656
Protein length (aa) 552

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13520 AA_permease_2 Amino acid permease 5.2E-48 71 520
PF00324 AA_permease Amino acid permease 4.4E-23 77 438

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P19807|HNM1_YEAST Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 24 545 1.0E-61
sp|O60113|YG64_SCHPO Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 14 551 1.0E-48
sp|Q9ZU50|BAT1_ARATH Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 34 544 6.0E-46
sp|O59942|AAP2_NEUCR Amino-acid permease 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aap-2 PE=2 SV=2 38 543 3.0E-42
sp|B9EXZ6|BAT1_ORYSJ Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 37 544 2.0E-41
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Swissprot ID Swissprot Description Start End E-value
sp|P19807|HNM1_YEAST Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 24 545 1.0E-61
sp|O60113|YG64_SCHPO Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 14 551 1.0E-48
sp|Q9ZU50|BAT1_ARATH Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 34 544 6.0E-46
sp|O59942|AAP2_NEUCR Amino-acid permease 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aap-2 PE=2 SV=2 38 543 3.0E-42
sp|B9EXZ6|BAT1_ORYSJ Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 37 544 2.0E-41
sp|Q9US40|YFZ1_SCHPO Uncharacterized amino-acid permease C1039.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.01 PE=3 SV=1 2 545 2.0E-36
sp|Q09887|YC9D_SCHPO Uncharacterized amino-acid permease C584.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC584.13 PE=3 SV=1 36 551 4.0E-34
sp|P36029|TPO5_YEAST Polyamine transporter TPO5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO5 PE=1 SV=1 28 543 3.0E-27
sp|O74537|YCQ4_SCHPO Uncharacterized amino-acid permease C74.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC74.04 PE=3 SV=1 20 540 4.0E-27
sp|Q9C0Z0|YKM2_SCHPO Uncharacterized amino-acid permease PB24D3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.02c PE=3 SV=1 36 550 6.0E-27
sp|Q10087|YAO8_SCHPO Uncharacterized amino-acid permease C11D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.08c PE=3 SV=1 34 547 7.0E-27
sp|O74248|GPT1_CANAX Putative polyamine transporter OS=Candida albicans GN=GPT1 PE=3 SV=1 34 547 5.0E-26
sp|P32837|UGA4_YEAST GABA-specific permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UGA4 PE=1 SV=1 5 551 7.0E-26
sp|P53744|BIO5_YEAST 7-keto 8-aminopelargonic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BIO5 PE=1 SV=1 36 517 2.0E-23
sp|Q9UT18|THI9_SCHPO Thiamine transporter thi9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thi9 PE=1 SV=1 6 525 3.0E-22
sp|O59813|YCT3_SCHPO Uncharacterized amino-acid permease C794.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.03 PE=2 SV=1 22 420 1.0E-15
sp|Q9LZ20|CAAT6_ARATH Cationic amino acid transporter 6, chloroplastic OS=Arabidopsis thaliana GN=CAT6 PE=2 SV=1 204 453 5.0E-07
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GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0016020 membrane Yes
GO:0055085 transmembrane transport Yes
GO:0051234 establishment of localization No
GO:0003674 molecular_function No
GO:0051179 localization No
GO:0005575 cellular_component No
GO:0005215 transporter activity No
GO:0008150 biological_process No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.5

Transmembrane Domains

Domain # Start End Length
1 55 77 22
2 92 114 22
3 134 151 17
4 178 200 22
5 207 229 22
6 244 266 22
7 287 309 22
8 338 360 22
9 388 407 19
10 417 439 22
11 478 500 22
12 510 532 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4261
MSFQGESHELGHVSQVKAIRPHVEEAPSSAGRRDLDREQLEKLGKKSVLKRNFRFLTILGFSCAVLVTWEGATIT
YGLGLKNGGPAGLIYGFIFIWIGNISVFATLCELISIAPTCGGQYHWVAMLAPKSSSKFLSYITGWLTLAGWQGA
AASSGFFNGKMIQGLIIFLSATYQPENWHAVMLLWLVILIVLVMNTVISSMLPKIEGVVLILHIVGFFAVLITLF
TFGQRQDAASVFVEFNNGGNWSSQALSVFVGLAGCAYSFAGVDCSFHMCEEVENPSAAVPRSIMTSVLINGAMGL
SMIIALLYGTTDLEKAMESTTGYPFMEIFYQATGSVGGTAAMICLVIFMSVCCTVGLVAATSRMCWAFSRDRGLP
FWRALSKVGTWTCVPVWAIAATSLISCLLGLITLGSKVVFEALVSVTISGLYSSYLIAAILLLYRRCGKGYKDPD
PSVLPDLVSTASGQGQELAWGPWHIPGVAGIVNNAFACVFLSVTLFFSFWPPQTPVEPETMNFCVLVTGGVVLFS
TAYYLAYARHAYKGPIREVHDDFAEE*
Coding >Hirsu2|4261
ATGAGCTTCCAGGGCGAGAGCCACGAGCTCGGCCACGTCAGCCAAGTCAAGGCCATCCGTCCCCATGTCGAGGAG
GCTCCCTCGTCCGCCGGCCGACGAGACCTGGACCGCGAGCAGCTGGAGAAGCTGGGCAAGAAGTCCGTTCTGAAG
CGCAACTTCCGCTTCCTGACCATTCTGGGCTTCAGCTGCGCCGTCCTGGTGACGTGGGAGGGCGCGACCATCACG
TATGGCCTCGGGCTGAAGAACGGCGGCCCGGCCGGGCTCATCTACGGCTTCATCTTCATCTGGATCGGAAACATC
AGCGTCTTCGCCACCCTGTGCGAGCTCATCTCCATCGCGCCCACGTGCGGCGGCCAGTACCACTGGGTGGCCATG
CTGGCGCCCAAGTCGTCGTCCAAGTTCCTCAGCTACATCACCGGCTGGCTGACGCTGGCCGGCTGGCAGGGCGCC
GCCGCCTCGTCCGGCTTCTTCAACGGCAAGATGATCCAGGGCCTCATCATCTTCCTGAGCGCCACCTACCAGCCC
GAGAACTGGCACGCCGTCATGCTGCTCTGGCTCGTCATCCTTATCGTCCTCGTCATGAACACCGTCATCAGCTCC
ATGCTGCCCAAGATCGAGGGCGTCGTCCTGATCCTGCACATCGTCGGCTTCTTCGCCGTCCTCATCACCCTCTTC
ACCTTTGGCCAGCGCCAGGACGCCGCCAGCGTCTTCGTCGAGTTCAACAACGGCGGCAACTGGTCTTCCCAGGCC
CTCTCCGTCTTCGTCGGCCTGGCCGGATGCGCCTACTCCTTCGCCGGCGTCGACTGTTCTTTCCACATGTGCGAA
GAGGTCGAGAACCCGTCGGCGGCCGTGCCTCGATCCATCATGACGAGCGTGCTGATCAACGGCGCCATGGGCCTG
TCGATGATCATCGCCCTGCTCTACGGCACGACGGACCTGGAGAAGGCGATGGAATCCACCACGGGCTACCCCTTC
ATGGAGATCTTCTACCAGGCCACGGGATCCGTCGGTGGGACGGCGGCCATGATCTGCCTCGTCATCTTCATGAGC
GTCTGCTGCACCGTCGGCCTCGTCGCCGCCACCTCTCGAATGTGCTGGGCTTTCTCCCGAGACCGCGGCCTGCCC
TTTTGGCGGGCTCTGTCCAAGGTCGGCACTTGGACGTGCGTCCCCGTCTGGGCCATCGCCGCCACCAGCCTCATC
TCCTGCCTGCTCGGCCTCATCACGCTGGGCTCCAAGGTCGTGTTCGAGGCCCTGGTCTCCGTCACCATCTCGGGC
CTCTACTCGTCCTACCTCATCGCCGCCATCCTGCTCCTCTACCGCCGCTGCGGAAAGGGGTACAAGGACCCGGAC
CCGAGCGTGCTCCCCGACCTCGTCAGCACGGCGAGCGGCCAGGGCCAGGAGCTGGCCTGGGGCCCGTGGCACATC
CCCGGCGTCGCCGGCATCGTCAACAACGCCTTCGCCTGCGTCTTCCTCTCCGTCACCCTCTTCTTCAGCTTCTGG
CCGCCGCAGACGCCCGTCGAGCCGGAGACGATGAACTTTTGCGTCCTGGTCACCGGCGGCGTCGTCCTCTTCAGC
ACCGCCTACTACCTGGCCTATGCGAGGCACGCCTACAAGGGACCCATCCGCGAAGTCCACGACGACTTCGCCGAG
GAATAA
Transcript >Hirsu2|4261
ATGAGCTTCCAGGGCGAGAGCCACGAGCTCGGCCACGTCAGCCAAGTCAAGGCCATCCGTCCCCATGTCGAGGAG
GCTCCCTCGTCCGCCGGCCGACGAGACCTGGACCGCGAGCAGCTGGAGAAGCTGGGCAAGAAGTCCGTTCTGAAG
CGCAACTTCCGCTTCCTGACCATTCTGGGCTTCAGCTGCGCCGTCCTGGTGACGTGGGAGGGCGCGACCATCACG
TATGGCCTCGGGCTGAAGAACGGCGGCCCGGCCGGGCTCATCTACGGCTTCATCTTCATCTGGATCGGAAACATC
AGCGTCTTCGCCACCCTGTGCGAGCTCATCTCCATCGCGCCCACGTGCGGCGGCCAGTACCACTGGGTGGCCATG
CTGGCGCCCAAGTCGTCGTCCAAGTTCCTCAGCTACATCACCGGCTGGCTGACGCTGGCCGGCTGGCAGGGCGCC
GCCGCCTCGTCCGGCTTCTTCAACGGCAAGATGATCCAGGGCCTCATCATCTTCCTGAGCGCCACCTACCAGCCC
GAGAACTGGCACGCCGTCATGCTGCTCTGGCTCGTCATCCTTATCGTCCTCGTCATGAACACCGTCATCAGCTCC
ATGCTGCCCAAGATCGAGGGCGTCGTCCTGATCCTGCACATCGTCGGCTTCTTCGCCGTCCTCATCACCCTCTTC
ACCTTTGGCCAGCGCCAGGACGCCGCCAGCGTCTTCGTCGAGTTCAACAACGGCGGCAACTGGTCTTCCCAGGCC
CTCTCCGTCTTCGTCGGCCTGGCCGGATGCGCCTACTCCTTCGCCGGCGTCGACTGTTCTTTCCACATGTGCGAA
GAGGTCGAGAACCCGTCGGCGGCCGTGCCTCGATCCATCATGACGAGCGTGCTGATCAACGGCGCCATGGGCCTG
TCGATGATCATCGCCCTGCTCTACGGCACGACGGACCTGGAGAAGGCGATGGAATCCACCACGGGCTACCCCTTC
ATGGAGATCTTCTACCAGGCCACGGGATCCGTCGGTGGGACGGCGGCCATGATCTGCCTCGTCATCTTCATGAGC
GTCTGCTGCACCGTCGGCCTCGTCGCCGCCACCTCTCGAATGTGCTGGGCTTTCTCCCGAGACCGCGGCCTGCCC
TTTTGGCGGGCTCTGTCCAAGGTCGGCACTTGGACGTGCGTCCCCGTCTGGGCCATCGCCGCCACCAGCCTCATC
TCCTGCCTGCTCGGCCTCATCACGCTGGGCTCCAAGGTCGTGTTCGAGGCCCTGGTCTCCGTCACCATCTCGGGC
CTCTACTCGTCCTACCTCATCGCCGCCATCCTGCTCCTCTACCGCCGCTGCGGAAAGGGGTACAAGGACCCGGAC
CCGAGCGTGCTCCCCGACCTCGTCAGCACGGCGAGCGGCCAGGGCCAGGAGCTGGCCTGGGGCCCGTGGCACATC
CCCGGCGTCGCCGGCATCGTCAACAACGCCTTCGCCTGCGTCTTCCTCTCCGTCACCCTCTTCTTCAGCTTCTGG
CCGCCGCAGACGCCCGTCGAGCCGGAGACGATGAACTTTTGCGTCCTGGTCACCGGCGGCGTCGTCCTCTTCAGC
ACCGCCTACTACCTGGCCTATGCGAGGCACGCCTACAAGGGACCCATCCGCGAAGTCCACGACGACTTCGCCGAG
GAATAA
Gene >Hirsu2|4261
ATGAGCTTCCAGGGCGAGAGCCACGAGCTCGGCCACGTCAGCCAAGTCAAGGCCATCCGTCCCCATGTCGAGGAG
GCTCCCTCGTCCGCCGGCCGACGAGACCTGGACCGCGAGCAGCTGGAGAAGCTGGGCAAGAAGTCCGTTCTGAAG
GCAAGCTGATAATGGCCCCTCTTGCTCTCTTTCTTTTTTTCTTCTTTTCGCGCCGCTATCCCCGTCCCCACAACC
AAACTCCTCCCCCCCCCCAGGTGATGGATGAATATATGCATCTGCCTTGAAATGATGATGATGATGATGATGTTG
AGATCTGGACAACTACTGACACGTCGTCGGCGCCTCTCGACCAGCGCAACTTCCGCTTCCTGACCATTCTGGGCT
TCAGCTGCGCCGTCCTGGTGACGTGGGAGGGCGCGACCATCACGTATGGCCTCGGGCTGAAGAACGGCGGCCCGG
CCGGGCTCATCTACGGCTTCATCTTCATCTGGATCGGAAACATCAGCGTCTTCGCCACCCTGTGCGAGCTCATCT
CCATCGCGCCCACGTGCGGCGGCCAGTACCACTGGGTGGCCATGCTGGCGCCCAAGTCGTCGTCCAAGTTCCTCA
GCTACATCACCGGCTGGCTGACGCTGGCCGGCTGGCAGGGCGCCGCCGCCTCGTCCGGCTTCTTCAACGGCAAGA
TGATCCAGGGCCTCATCATCTTCCTGAGCGCCACCTACCAGCCCGAGAACTGGCACGCCGTCATGCTGCTCTGGC
TCGTCATCCTTATCGTCCTCGTCATGAACACCGTCATCAGCTCCATGCTGCCCAAGATCGAGGGCGTCGTCCTGA
TCCTGCACATCGTCGGCTTCTTCGCCGTCCTCATCACCCTCTTCACCTTTGGCCAGCGCCAGGACGCCGCCAGCG
TCTTCGTCGAGTTCAACAACGGCGGCAACTGGTCTTCCCAGGCCCTCTCCGTCTTCGTCGGCCTGGCCGGATGCG
CCTACTCCTTCGCCGGTAAGCCTTTCTTCCCCAGCCCCTTGACCCGTGCTTCTCTCAAGCATGCGCCTCGACGGA
CGAGCTTGCTTCGTTCCGTCGATCCGGCCAAACAAGGCGGCCCACACTGACATCGCGATGGTTTTCCAGGCGTCG
ACTGTTCTTTCCACGTAAATGCCCCCCTCCCGCCCTGCTCTCCTGCTCTCATCTCTCTGTGCCGTCTGGCCGCTT
GCCGTTGAGGCTGCGGGACTGACTGACCATGGGCGTGTGTAGATGTGCGAAGAGGTCGAGAACCCGTCGGCGGCC
GTGCCTCGATCCATCATGACGAGCGTGCTGATCAACGGCGCCATGGGCCTGTCGATGATCATCGCCCTGCTCTAC
GGCACGACGGACCTGGAGAAGGCGATGGAATCCACCACGGGCTACCCCTTCATGGAGATCTTCTACCAGGCCACG
GGATCCGTCGGTGGGACGGCGGCCATGATCTGCCTCGTCATCTTCATGAGCGTCTGCTGCACCGTCGGCCTCGTC
GCCGCCACCTCTCGAATGTGCTGGGCTTTCTCCCGAGACCGCGGCCTGCCCTTTTGGCGGGCTCTGTCCAAGGTG
AGTCCCTCTGTCCGGTTGAGTTTGCGTGTATGCACTGCTTGGCTGAACGGTTGCGCTCGACAGGTCGGCACTTGG
ACGTGCGTCCCCGTCTGGGCCATCGCCGCCACCAGCCTCATCTCCTGCCTGCTCGGCCTCATCACGCTGGGCTCC
AAGGTCGTGTTCGAGGCCCTGGTCTCCGTCACCATCTCGGGCCTCTACTCGTCCTACCTCATCGCCGCCATCCTG
CTCCTCTACCGCCGCTGCGGAAAGGGGTACAAGGACCCGGACCCGAGCGTGCTCCCCGACCTCGTCAGCACGGCG
AGCGGCCAGGGCCAGGAGCTGGCCTGGGGCCCGTGGCACATCCCCGGCGTCGCCGGCATCGTCAACAACGCCTTC
GCCTGCGTCTTCCTCTCCGTCACCCTCTTCTTCAGCTTCTGGCCGCCGCAGACGCCCGTCGAGCCGGAGACGATG
AACTTTTGCGTCCTGGTCACCGGCGGCGTCGTCCTCTTCAGCACCGCCTACTACCTGGCCTATGCGAGGCACGCC
TACAAGGGACCCATCCGCGAAGTCCACGACGACTTCGCCGAGGAATAA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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