© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4251 |
| Gene name | |
| Location | Contig_2184:1390..2932 |
| Strand | + |
| Gene length (bp) | 1542 |
| Transcript length (bp) | 1230 |
| Coding sequence length (bp) | 1230 |
| Protein length (aa) | 410 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.1E-22 | 36 | 399 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P53322|TNA1_YEAST | High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 | 9 | 408 | 5.0E-52 |
| sp|Q10097|YAOI_SCHPO | Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 | 8 | 409 | 8.0E-47 |
| sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 5 | 407 | 1.0E-46 |
| sp|Q9US44|YIZG_SCHPO | Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 | 7 | 404 | 1.0E-45 |
| sp|Q9US37|YFZ4_SCHPO | Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 | 4 | 409 | 4.0E-42 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P53322|TNA1_YEAST | High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 | 9 | 408 | 5.0E-52 |
| sp|Q10097|YAOI_SCHPO | Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 | 8 | 409 | 8.0E-47 |
| sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 5 | 407 | 1.0E-46 |
| sp|Q9US44|YIZG_SCHPO | Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 | 7 | 404 | 1.0E-45 |
| sp|Q9US37|YFZ4_SCHPO | Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 | 4 | 409 | 4.0E-42 |
| sp|O94572|YGDF_SCHPO | Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 | 10 | 407 | 3.0E-31 |
| sp|B5BP49|YP55_SCHPO | Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 | 10 | 397 | 4.0E-30 |
| sp|P15365|DAL5_YEAST | Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 | 5 | 382 | 1.0E-25 |
| sp|O94491|YC7A_SCHPO | Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 | 12 | 407 | 7.0E-23 |
| sp|P70786|TUB3_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 10 | 320 | 8.0E-22 |
| sp|Q44470|TUB4_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 18 | 320 | 5.0E-19 |
| sp|O74923|YJ7D_SCHPO | Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 | 11 | 357 | 1.0E-17 |
| sp|O43000|LIZ1_SCHPO | Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 | 18 | 311 | 2.0E-17 |
| sp|P76470|RHMT_ECOLI | Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 | 31 | 320 | 3.0E-17 |
| sp|Q07904|THI73_YEAST | Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 | 23 | 316 | 1.0E-14 |
| sp|Q88FY6|NICT_PSEPK | Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 | 9 | 320 | 4.0E-14 |
| sp|P40445|YIQ6_YEAST | Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 | 17 | 408 | 1.0E-12 |
| sp|Q9C0V8|YHJ1_SCHPO | Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 | 9 | 275 | 3.0E-12 |
| sp|P39709|SEO1_YEAST | Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 | 37 | 340 | 1.0E-09 |
| sp|Q05181|PHT1_PSEPU | Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 | 23 | 320 | 1.0E-09 |
| sp|P25621|FEN2_YEAST | Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 | 16 | 240 | 3.0E-08 |
| sp|Q9C0U9|YQD3_SCHPO | Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 | 44 | 234 | 6.0E-08 |
| sp|Q12235|YCT1_YEAST | High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 | 9 | 279 | 2.0E-06 |
| sp|O13880|VHT1_SCHPO | Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 | 23 | 401 | 1.0E-05 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 48 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 70 | 89 | 19 |
| 2 | 93 | 115 | 22 |
| 3 | 122 | 144 | 22 |
| 4 | 154 | 176 | 22 |
| 5 | 189 | 211 | 22 |
| 6 | 260 | 282 | 22 |
| 7 | 294 | 313 | 19 |
| 8 | 317 | 339 | 22 |
| 9 | 351 | 373 | 22 |
| 10 | 383 | 405 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4251 MAGPLKPGDEEDVCVDTSNADVRIRRAFDRRVMPLVCCLYVCSYLDRGNIGNAKTAGAQNALGLDSAQWAWVLNS FYICYVAFGWTTMLWKMLPAHIFVSVLCVCWGAAAMSSGAARNMAELVVTRCFLGVFEVIFGCGAPYFLSLLYKR RELAFRMSLLLGMMPLANTFASSLAYGITQVRGSLEPWRLLFIIEGCFSVALAPLVYLFLIDSPSTAPFLTLQDR VLAVKRLQHRDTTAKDGVKWRQVLLAFCDYKNYVHAAIHFSANYSFAALSNFLPTIVHDMGHDPIRAQGLTAPAY FAAFLLCLLTSYLSDRLWRRGPLLAATAALAVAGYALLAAVRDQSKANVRYAGVWLAACGAFPALSLNVTWLLNN QGGDSKKGAGLAIFLTIGQCSSFVSSLVFPKSDA* |
| Coding | >Hirsu2|4251 ATGGCCGGCCCCTTGAAGCCGGGGGACGAAGAGGACGTCTGCGTCGACACGAGCAATGCCGACGTGCGAATACGC CGCGCTTTCGATCGCCGAGTCATGCCTCTGGTCTGCTGCCTCTACGTCTGCTCCTACCTGGACCGCGGCAACATC GGCAACGCAAAGACGGCGGGCGCCCAGAACGCCCTCGGCCTCGACTCGGCCCAGTGGGCTTGGGTCCTTAACTCC TTCTACATCTGCTACGTCGCCTTCGGATGGACGACGATGCTGTGGAAGATGCTGCCCGCTCATATCTTCGTCTCC GTCCTCTGCGTCTGCTGGGGCGCAGCCGCCATGAGCTCCGGCGCCGCCCGCAACATGGCCGAACTCGTCGTCACC CGATGCTTCCTCGGCGTCTTCGAAGTCATCTTCGGCTGCGGGGCCCCGTACTTCCTCTCGCTGCTGTACAAGCGG CGCGAGCTGGCTTTCCGCATGTCCCTGCTTCTGGGCATGATGCCTCTGGCCAACACGTTTGCCTCCAGCCTCGCC TACGGCATTACCCAGGTCCGCGGCTCTCTGGAGCCGTGGAGGCTCTTGTTCATTATAGAGGGATGCTTTTCCGTT GCATTGGCTCCCCTCGTCTACCTCTTCCTCATCGATTCGCCTTCCACAGCCCCCTTCCTCACCTTACAAGACCGC GTCTTGGCCGTCAAGCGGCTGCAGCACAGAGACACGACGGCCAAGGACGGCGTCAAGTGGCGGCAGGTGTTGCTG GCGTTCTGCGACTACAAGAACTACGTCCACGCTGCCATCCACTTCAGCGCCAATTACTCCTTCGCCGCCCTATCC AACTTCCTGCCCACCATCGTCCACGATATGGGCCACGACCCGATCAGAGCCCAGGGGCTGACGGCTCCGGCTTAC TTCGCCGCCTTCCTGCTCTGCCTCCTCACCTCGTACCTGTCCGACAGGCTGTGGAGGCGGGGCCCGCTCCTGGCG GCCACGGCGGCCCTTGCCGTTGCCGGCTACGCCCTGCTCGCCGCCGTCCGAGACCAGAGCAAGGCCAACGTCCGG TACGCCGGCGTCTGGCTGGCGGCCTGCGGCGCCTTTCCGGCCCTGAGCCTCAACGTCACATGGCTCCTCAACAAC CAGGGCGGCGACTCCAAGAAAGGCGCCGGCCTCGCCATATTTCTGACCATCGGACAATGTTCCTCCTTCGTCAGC AGTCTCGTCTTCCCTAAGAGCGATGCGTAA |
| Transcript | >Hirsu2|4251 ATGGCCGGCCCCTTGAAGCCGGGGGACGAAGAGGACGTCTGCGTCGACACGAGCAATGCCGACGTGCGAATACGC CGCGCTTTCGATCGCCGAGTCATGCCTCTGGTCTGCTGCCTCTACGTCTGCTCCTACCTGGACCGCGGCAACATC GGCAACGCAAAGACGGCGGGCGCCCAGAACGCCCTCGGCCTCGACTCGGCCCAGTGGGCTTGGGTCCTTAACTCC TTCTACATCTGCTACGTCGCCTTCGGATGGACGACGATGCTGTGGAAGATGCTGCCCGCTCATATCTTCGTCTCC GTCCTCTGCGTCTGCTGGGGCGCAGCCGCCATGAGCTCCGGCGCCGCCCGCAACATGGCCGAACTCGTCGTCACC CGATGCTTCCTCGGCGTCTTCGAAGTCATCTTCGGCTGCGGGGCCCCGTACTTCCTCTCGCTGCTGTACAAGCGG CGCGAGCTGGCTTTCCGCATGTCCCTGCTTCTGGGCATGATGCCTCTGGCCAACACGTTTGCCTCCAGCCTCGCC TACGGCATTACCCAGGTCCGCGGCTCTCTGGAGCCGTGGAGGCTCTTGTTCATTATAGAGGGATGCTTTTCCGTT GCATTGGCTCCCCTCGTCTACCTCTTCCTCATCGATTCGCCTTCCACAGCCCCCTTCCTCACCTTACAAGACCGC GTCTTGGCCGTCAAGCGGCTGCAGCACAGAGACACGACGGCCAAGGACGGCGTCAAGTGGCGGCAGGTGTTGCTG GCGTTCTGCGACTACAAGAACTACGTCCACGCTGCCATCCACTTCAGCGCCAATTACTCCTTCGCCGCCCTATCC AACTTCCTGCCCACCATCGTCCACGATATGGGCCACGACCCGATCAGAGCCCAGGGGCTGACGGCTCCGGCTTAC TTCGCCGCCTTCCTGCTCTGCCTCCTCACCTCGTACCTGTCCGACAGGCTGTGGAGGCGGGGCCCGCTCCTGGCG GCCACGGCGGCCCTTGCCGTTGCCGGCTACGCCCTGCTCGCCGCCGTCCGAGACCAGAGCAAGGCCAACGTCCGG TACGCCGGCGTCTGGCTGGCGGCCTGCGGCGCCTTTCCGGCCCTGAGCCTCAACGTCACATGGCTCCTCAACAAC CAGGGCGGCGACTCCAAGAAAGGCGCCGGCCTCGCCATATTTCTGACCATCGGACAATGTTCCTCCTTCGTCAGC AGTCTCGTCTTCCCTAAGAGCGATGCGTAA |
| Gene | >Hirsu2|4251 ATGGCCGGCCCCTTGAAGCCGGGGGACGAAGAGGACGTCTGCGTCGACACGAGCAATGCCGACGTGCGAATACGC CGCGCTGTACGTGCCGTGCTCCCCTTGAATCCCCCCCCCCCTCCTCCTCCACCACCACCACCACCACACCCGGTG CTGAAGCAGGCCACTGCCAAGGTGAGACGAAGATGCGCTCGTCGTCATCCCCTGACCGTCCAGAACCTGCAGTTC GATCGCCGAGTCATGCCTCTGGTCTGCTGCCTCTACGTCTGCTCCTACCTGGACCGCGGCAACATCGGCAACGCA AAGACGGCGGGCGCCCAGAACGCCCTCGGCCTCGACTCGGCCCAGTGGGCTTGGGTCCTTAACTCCTTCTACATC TGCTACGTCGCCTTCGGATGGACGACGATGCTGTGGAAGATGCTGCCCGCTCATATCTTCGTCTCCGTCCTCTGC GTCTGGTACCTCGGAATTCCGTCCCCGTCTGCCTCGATATGCCCTCTCTTGCCTGCCTGCTGCTGACTGCGTTAC AACAGCTGGGGCGCAGCCGCCATGAGCTCCGGCGCCGCCCGCAACATGGCCGAACTCGTCGTCACCCGATGCTTC CTCGGCGTCTTCGAAGTCATCTTCGGCTGCGGGGCCCCGTACTTCCTCTCGCTGCTGTACAAGCGGCGCGAGCTG GCTTTCCGCATGTCCCTGCTTCTGGGCATGATGCCTCTGGCCAACACGTTTGCCTCCAGCCTCGCCTACGGCATT ACCCAGGTCCGCGGCTCTCTGGAGCCGTGGAGGCTCTTGTTCATTATAGGCACGCTCCGCACACCTCTCTCTCCA CCCCTTTTCTTCCCCTCCTCTTCACTGTCTTTCCTCCGTAAGCTGGCCCGCCGGCTGATGGAACGTCCAGAGGGA TGCTTTTCCGTTGCATTGGCTCCCCTCGTCTACCTCTTCCTCATCGATTCGCCTTCCACAGCCCCCTTCCTCACC TTACAAGACCGCGTCTTGGCCGTCAAGCGGCTGCAGCACAGAGACACGACGGCCAAGGACGGCGTCAAGTGGCGG CAGGTGTTGCTGGCGTTCTGCGACTACAAGAACTACGTCCACGCTGCCATCCACTTCAGCGCCAATTACTCCTTC GCCGCCCTATCCAACTTCCTGCCCACCATCGTCCACGATATGGGCCACGACCCGATCAGAGCCCAGGGGCTGACG GCTCCGGCTTACTTCGCCGCCTTCCTGCTCTGCCTCCTCACCTCGTACCTGTCCGACAGGCTGTGGAGGCGGGGC CCGCTCCTGGCGGCCACGGCGGCCCTTGCCGTTGCCGGCTACGCCCTGCTCGCCGCCGTCCGAGACCAGAGCAAG GCCAACGTCCGGTACGCCGGCGTCTGGCTGGCGGCCTGCGGCGCCTTTCCGGCCCTGAGCCTCAACGTCACATGG CTCCTCAACAACCAGGGCGGCGACTCCAAGAAAGGCGCCGGCCTCGCCATATTTCTGACCATCGGACAATGTTCC TCCTTCGTCAGCAGTCTCGTCTTCCCTAAGAGCGATGCGTAA |