© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|4242 |
| Gene name | |
| Location | Contig_218:26657..27413 |
| Strand | - |
| Gene length (bp) | 756 |
| Transcript length (bp) | 582 |
| Coding sequence length (bp) | 582 |
| Protein length (aa) | 194 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P0DN32|CUPR1_ARTBC | Probable GPI-anchored cupredoxin ARB_05732-1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05732-1 PE=1 SV=1 | 14 | 187 | 9.0E-27 |
| sp|D4B3I5|A3024_ARTBC | Extracellular serine-rich protein ARB_03024 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03024 PE=1 SV=1 | 21 | 134 | 2.0E-14 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | 0.0539 | 0.0445 | 0.8155 | 0.4484 | 0.0838 | 0.0036 | 0.1549 | 0.088 | 0.0637 | 0.0046 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 20 | 0.999667 |
| Orthofinder run ID | 4 |
| Orthogroup | 6115 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4242 MLYSSLKLAVLSLLAAGSAAKTVRIDVGRSGKTFSPDSVTADRGDTLEFHFSGSKHSVVAGDFDKACSPLASGGF YSGTLQAKGDDPSVFQVNVTSTDPIFYYCSVGNHCKDGMVGVVNPSQDRTLDKFRSNAKSAGGNVSPPAPFGGKA IKPSESTATASGAGPRPTNAAGHLTAPLVALGGAAVGAAALLA* |
| Coding | >Hirsu2|4242 ATGCTGTACAGCAGCCTCAAGCTCGCCGTCCTGTCCCTGCTGGCGGCCGGCTCGGCAGCCAAGACGGTCCGGATC GACGTCGGCCGCAGCGGCAAGACCTTCTCGCCCGACTCCGTCACGGCCGACCGCGGCGACACGCTCGAGTTCCAC TTCTCCGGCTCCAAGCACAGCGTCGTCGCCGGCGACTTCGACAAGGCCTGCTCGCCCCTCGCCTCCGGCGGCTTC TACTCCGGCACCCTCCAGGCCAAGGGTGATGACCCCAGCGTCTTCCAGGTCAACGTCACCTCGACCGATCCCATC TTCTACTACTGCTCCGTCGGCAACCACTGCAAGGACGGCATGGTCGGCGTCGTCAACCCGAGCCAGGATCGGACG CTCGACAAGTTCAGGAGCAACGCCAAGTCGGCCGGCGGCAACGTCAGCCCCCCCGCCCCCTTCGGCGGCAAGGCT ATCAAGCCGAGCGAGAGCACGGCCACGGCGTCGGGCGCCGGCCCCCGGCCGACCAACGCCGCCGGCCACCTGACG GCGCCGCTCGTCGCCCTCGGCGGTGCCGCCGTCGGTGCCGCGGCGTTGCTCGCCTAA |
| Transcript | >Hirsu2|4242 ATGCTGTACAGCAGCCTCAAGCTCGCCGTCCTGTCCCTGCTGGCGGCCGGCTCGGCAGCCAAGACGGTCCGGATC GACGTCGGCCGCAGCGGCAAGACCTTCTCGCCCGACTCCGTCACGGCCGACCGCGGCGACACGCTCGAGTTCCAC TTCTCCGGCTCCAAGCACAGCGTCGTCGCCGGCGACTTCGACAAGGCCTGCTCGCCCCTCGCCTCCGGCGGCTTC TACTCCGGCACCCTCCAGGCCAAGGGTGATGACCCCAGCGTCTTCCAGGTCAACGTCACCTCGACCGATCCCATC TTCTACTACTGCTCCGTCGGCAACCACTGCAAGGACGGCATGGTCGGCGTCGTCAACCCGAGCCAGGATCGGACG CTCGACAAGTTCAGGAGCAACGCCAAGTCGGCCGGCGGCAACGTCAGCCCCCCCGCCCCCTTCGGCGGCAAGGCT ATCAAGCCGAGCGAGAGCACGGCCACGGCGTCGGGCGCCGGCCCCCGGCCGACCAACGCCGCCGGCCACCTGACG GCGCCGCTCGTCGCCCTCGGCGGTGCCGCCGTCGGTGCCGCGGCGTTGCTCGCCTAA |
| Gene | >Hirsu2|4242 ATGCTGTACAGCAGCCTCAAGCTCGCCGTCCTGTCCCTGCTGGCGGCCGGCTCGGCAGCCAAGACGGTCCGGATC GACGTCGGCCGCAGCGGCAAGACCTTCTCGCCCGACTCCGTCACGGCCGACCGCGGCGACACGCTCGAGTTCCAC TTCTCCGGCTCCAAGCACAGCGTCGTCGCCGGCGACTTCGACAAGGCCTGCTCGCCCCTCGCCTCCGGCGGCTTC TACTCCGGCACCCTCCAGGCCAAGGGTGATGACGTGAGTTTTGCTTCTTCTTCTTCTCTGTGGTGCTGCTGGTGC TATGTCGCAGTGCTGCTGCTGTTGTCCTCACGGTCGTTGTCGTGGTTGTTGTGAAGGCGCTTTCCCCCCTCCTCT GCCGACGCAAGCCCGGGAGTCGTGCTCGGTGCTGACCGCTCTCCCTCCTGCTTCCAGCCCAGCGTCTTCCAGGTC AACGTCACCTCGACCGATCCCATCTTCTACTACTGCTCCGTCGGCAACCACTGCAAGGACGGCATGGTCGGCGTC GTCAACCCGAGCCAGGATCGGACGCTCGACAAGTTCAGGAGCAACGCCAAGTCGGCCGGCGGCAACGTCAGCCCC CCCGCCCCCTTCGGCGGCAAGGCTATCAAGCCGAGCGAGAGCACGGCCACGGCGTCGGGCGCCGGCCCCCGGCCG ACCAACGCCGCCGGCCACCTGACGGCGCCGCTCGTCGCCCTCGGCGGTGCCGCCGTCGGTGCCGCGGCGTTGCTC GCCTAA |