© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4212 |
| Gene name | |
| Location | Contig_217:7496..10004 |
| Strand | - |
| Gene length (bp) | 2508 |
| Transcript length (bp) | 2394 |
| Coding sequence length (bp) | 2394 |
| Protein length (aa) | 798 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1667 | 0.0781 | 0.9696 | 0.1928 | 0.1141 | 0.0212 | 0.251 | 0.2223 | 0.2281 | 0.0057 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 17 | 0.999774 |
| Orthofinder run ID | 4 |
| Orthogroup | 2701 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4212 MLALVVLLVVGLCGVSALPAAQSDAPCTRDDLFTSLSRHGRPFCSSVLEGRCRQSTTPTQYATYDPDVLSRHCEC VLADTCAHSATWTSGGVPTVTSAESSPRITVTLTGPSTRTTPGSGTPTVTYVSGSSRASTASGSPSSDGRDDSTS GRVTATPSSSSSSEAKTETRKSQASSGESSSTVAPDPGSPTGSTTTSSGFPGQTGPSSGIRQPSSGLTASTVSGG GRWNTSSTAASSSSNSGAPTASSDPDGAGSTTSLTSAETQTRWNSSSSSRVGTGAATTSGTGVASSPAGTATGSD TSGAGGPGATVAPTPLPAENFTQVTRAGAVTERTCYHLPADPVRGPSRRATPHNDELREGNYTIPVPYIESVDFG ADGVAPLFLTLRDAANGTHYIDVSRRDRVSIVDSLGNAMLLDGRGIHFSTNSCRWDVSIAVDGLYQQLADLSGHV CSKGRLAERQEQQQQQQGPAPPGEAHFRQTVYLRDQCGTAVGRAVRKYPLLRVGATECLEAEVDEAGGRWVFDCP FPGSDSAAARCRRAARAGIFKFLFVAPFGGACPDLSTVITTLESDSKDFLNADSLRAGLYAQGLDAGQRAEADLA VMYYEQLWELLKQAFSRSRTSPPGVASAVQEYIDTYRSLRDFDDDLCRDLHAPDPPLNLSLRAGASDLPAVAALA AAPPAPPPPLNLTVQDPAQVACCPRGSVSSFGRGSGACAYPDSAIIGDSGCVCGRTASNASVAFEYTECNNFVAR CSVDADCDVDAHPGFVCLIGSCCGGGVCVDPYECSRNGTGLIRRLAM* |
| Coding | >Hirsu2|4212 ATGCTCGCCCTCGTCGTGCTGCTGGTCGTCGGGCTGTGCGGCGTGTCCGCCTTGCCGGCCGCGCAGAGCGATGCG CCATGTACGCGCGACGACCTCTTCACCTCGCTCTCTCGCCACGGCCGGCCGTTCTGCTCCAGCGTGCTCGAGGGC CGCTGCAGGCAGTCGACCACGCCGACGCAGTATGCGACGTATGACCCGGACGTGCTGTCGCGCCATTGTGAGTGC GTCTTGGCCGACACTTGCGCCCACTCGGCCACCTGGACCTCGGGAGGCGTGCCGACGGTGACGAGCGCCGAGAGC AGCCCCCGCATCACCGTCACACTGACCGGGCCCTCGACCCGGACGACGCCGGGCTCGGGGACGCCGACGGTGACC TATGTCAGTGGCTCGAGCCGTGCGTCTACGGCCTCGGGCTCGCCTTCGAGCGACGGCCGTGATGACTCGACCAGC GGCCGCGTGACGGCCACCCCGTCGAGCTCGTCCTCTTCGGAAGCCAAGACGGAAACGAGGAAGTCGCAGGCCAGC TCCGGAGAATCGTCGTCGACCGTCGCGCCCGACCCGGGCAGCCCGACCGGGTCGACAACCACGTCGTCCGGCTTC CCGGGGCAGACGGGCCCGTCGTCGGGCATCCGGCAGCCCAGCTCGGGCCTCACAGCGTCGACGGTTTCGGGCGGT GGGCGCTGGAACACTTCCAGCACGGCGGCGTCGTCCTCGTCGAACTCGGGCGCGCCGACTGCGTCGTCGGATCCA GACGGCGCCGGGTCGACGACGTCGTTGACCTCCGCCGAGACGCAGACGAGATGGAACTCGTCGTCGTCTTCGCGC GTCGGAACAGGAGCAGCAACAACCTCCGGCACCGGGGTGGCCTCGAGCCCGGCCGGGACGGCGACGGGCTCCGAC ACCAGCGGCGCCGGGGGCCCCGGCGCGACGGTGGCCCCCACGCCGCTTCCGGCCGAGAACTTCACGCAGGTGACG CGGGCCGGGGCGGTGACGGAGCGGACGTGCTACCACCTGCCGGCGGACCCGGTGCGCGGCCCGAGCCGGCGGGCG ACGCCGCACAACGACGAGCTGCGCGAGGGCAACTACACGATCCCGGTGCCGTACATCGAGTCGGTCGACTTTGGC GCCGACGGCGTGGCGCCGCTGTTCCTGACGCTGCGCGACGCCGCCAACGGGACGCACTACATCGACGTCTCGCGC CGCGACCGCGTCTCCATCGTCGACTCGCTCGGCAACGCCATGCTGCTCGACGGCCGCGGCATCCACTTCTCCACC AACAGCTGCCGCTGGGACGTGTCCATCGCCGTCGACGGCCTGTACCAGCAGCTGGCGGACCTGTCGGGCCACGTC TGCTCCAAGGGCCGGCTGGCGGAGCGTCAGGAGCAGCAGCAGCAGCAGCAGGGGCCGGCCCCCCCCGGAGAGGCG CACTTCCGGCAGACGGTGTACCTGCGCGACCAGTGCGGCACGGCCGTCGGCCGGGCGGTGCGCAAGTACCCGCTG CTGAGGGTGGGCGCCACCGAGTGTCTCGAGGCCGAGGTCGACGAGGCCGGCGGCCGGTGGGTCTTCGACTGCCCG TTCCCGGGCTCCGACTCGGCGGCGGCCCGGTGCCGGCGGGCTGCGCGCGCCGGCATCTTCAAGTTCCTCTTCGTC GCGCCCTTCGGCGGCGCCTGCCCCGACCTGTCGACCGTCATCACGACGCTCGAGTCGGACAGCAAGGACTTCCTC AACGCCGACTCGCTGCGCGCCGGCCTGTACGCCCAGGGCCTCGACGCCGGCCAGCGCGCCGAGGCCGACCTGGCC GTCATGTACTACGAGCAGCTGTGGGAGCTGCTCAAGCAGGCCTTCTCGCGCTCCCGCACCAGCCCGCCCGGCGTC GCCAGCGCCGTCCAGGAGTACATCGACACCTACCGCTCGCTGCGCGACTTCGACGACGACCTGTGCCGCGACCTG CACGCCCCGGACCCGCCCCTGAACCTGAGCCTGCGCGCCGGCGCCTCCGACCTGCCGGCCGTCGCCGCCTTGGCC GCTGCCCCGCCCGCGCCGCCGCCGCCGCTCAACCTCACCGTCCAGGACCCGGCCCAGGTCGCCTGCTGCCCGCGC GGGAGCGTCTCCAGCTTCGGCCGGGGCTCCGGCGCCTGTGCCTACCCGGACTCGGCCATCATCGGCGACTCGGGC TGCGTCTGCGGCCGCACCGCCTCCAACGCCTCCGTCGCCTTCGAGTACACCGAGTGCAACAACTTTGTCGCCCGC TGCTCTGTCGACGCCGACTGTGACGTCGACGCACATCCGGGCTTCGTCTGTCTCATCGGGAGCTGCTGCGGCGGC GGCGTCTGCGTCGACCCTTATGAATGTTCTCGCAACGGAACCGGCCTGATCCGCAGGCTGGCCATGTAG |
| Transcript | >Hirsu2|4212 ATGCTCGCCCTCGTCGTGCTGCTGGTCGTCGGGCTGTGCGGCGTGTCCGCCTTGCCGGCCGCGCAGAGCGATGCG CCATGTACGCGCGACGACCTCTTCACCTCGCTCTCTCGCCACGGCCGGCCGTTCTGCTCCAGCGTGCTCGAGGGC CGCTGCAGGCAGTCGACCACGCCGACGCAGTATGCGACGTATGACCCGGACGTGCTGTCGCGCCATTGTGAGTGC GTCTTGGCCGACACTTGCGCCCACTCGGCCACCTGGACCTCGGGAGGCGTGCCGACGGTGACGAGCGCCGAGAGC AGCCCCCGCATCACCGTCACACTGACCGGGCCCTCGACCCGGACGACGCCGGGCTCGGGGACGCCGACGGTGACC TATGTCAGTGGCTCGAGCCGTGCGTCTACGGCCTCGGGCTCGCCTTCGAGCGACGGCCGTGATGACTCGACCAGC GGCCGCGTGACGGCCACCCCGTCGAGCTCGTCCTCTTCGGAAGCCAAGACGGAAACGAGGAAGTCGCAGGCCAGC TCCGGAGAATCGTCGTCGACCGTCGCGCCCGACCCGGGCAGCCCGACCGGGTCGACAACCACGTCGTCCGGCTTC CCGGGGCAGACGGGCCCGTCGTCGGGCATCCGGCAGCCCAGCTCGGGCCTCACAGCGTCGACGGTTTCGGGCGGT GGGCGCTGGAACACTTCCAGCACGGCGGCGTCGTCCTCGTCGAACTCGGGCGCGCCGACTGCGTCGTCGGATCCA GACGGCGCCGGGTCGACGACGTCGTTGACCTCCGCCGAGACGCAGACGAGATGGAACTCGTCGTCGTCTTCGCGC GTCGGAACAGGAGCAGCAACAACCTCCGGCACCGGGGTGGCCTCGAGCCCGGCCGGGACGGCGACGGGCTCCGAC ACCAGCGGCGCCGGGGGCCCCGGCGCGACGGTGGCCCCCACGCCGCTTCCGGCCGAGAACTTCACGCAGGTGACG CGGGCCGGGGCGGTGACGGAGCGGACGTGCTACCACCTGCCGGCGGACCCGGTGCGCGGCCCGAGCCGGCGGGCG ACGCCGCACAACGACGAGCTGCGCGAGGGCAACTACACGATCCCGGTGCCGTACATCGAGTCGGTCGACTTTGGC GCCGACGGCGTGGCGCCGCTGTTCCTGACGCTGCGCGACGCCGCCAACGGGACGCACTACATCGACGTCTCGCGC CGCGACCGCGTCTCCATCGTCGACTCGCTCGGCAACGCCATGCTGCTCGACGGCCGCGGCATCCACTTCTCCACC AACAGCTGCCGCTGGGACGTGTCCATCGCCGTCGACGGCCTGTACCAGCAGCTGGCGGACCTGTCGGGCCACGTC TGCTCCAAGGGCCGGCTGGCGGAGCGTCAGGAGCAGCAGCAGCAGCAGCAGGGGCCGGCCCCCCCCGGAGAGGCG CACTTCCGGCAGACGGTGTACCTGCGCGACCAGTGCGGCACGGCCGTCGGCCGGGCGGTGCGCAAGTACCCGCTG CTGAGGGTGGGCGCCACCGAGTGTCTCGAGGCCGAGGTCGACGAGGCCGGCGGCCGGTGGGTCTTCGACTGCCCG TTCCCGGGCTCCGACTCGGCGGCGGCCCGGTGCCGGCGGGCTGCGCGCGCCGGCATCTTCAAGTTCCTCTTCGTC GCGCCCTTCGGCGGCGCCTGCCCCGACCTGTCGACCGTCATCACGACGCTCGAGTCGGACAGCAAGGACTTCCTC AACGCCGACTCGCTGCGCGCCGGCCTGTACGCCCAGGGCCTCGACGCCGGCCAGCGCGCCGAGGCCGACCTGGCC GTCATGTACTACGAGCAGCTGTGGGAGCTGCTCAAGCAGGCCTTCTCGCGCTCCCGCACCAGCCCGCCCGGCGTC GCCAGCGCCGTCCAGGAGTACATCGACACCTACCGCTCGCTGCGCGACTTCGACGACGACCTGTGCCGCGACCTG CACGCCCCGGACCCGCCCCTGAACCTGAGCCTGCGCGCCGGCGCCTCCGACCTGCCGGCCGTCGCCGCCTTGGCC GCTGCCCCGCCCGCGCCGCCGCCGCCGCTCAACCTCACCGTCCAGGACCCGGCCCAGGTCGCCTGCTGCCCGCGC GGGAGCGTCTCCAGCTTCGGCCGGGGCTCCGGCGCCTGTGCCTACCCGGACTCGGCCATCATCGGCGACTCGGGC TGCGTCTGCGGCCGCACCGCCTCCAACGCCTCCGTCGCCTTCGAGTACACCGAGTGCAACAACTTTGTCGCCCGC TGCTCTGTCGACGCCGACTGTGACGTCGACGCACATCCGGGCTTCGTCTGTCTCATCGGGAGCTGCTGCGGCGGC GGCGTCTGCGTCGACCCTTATGAATGTTCTCGCAACGGAACCGGCCTGATCCGCAGGCTGGCCATGTAG |
| Gene | >Hirsu2|4212 ATGCTCGCCCTCGTCGTGCTGCTGGTCGTCGGGCTGTGCGGCGTGTCCGCCTTGCCGGCCGCGCAGAGCGATGCG CCATGTACGCGCGACGACCTCTTCACCTCGCTCTCTCGCCACGGCCGGCCGTTCTGCTCCAGCGTGCTCGAGGGC CGCTGCAGGCAGTCGACCACGCCGACGCAGTATGCGACGTATGACCCGGACGTGCTGTCGCGCCATGTAAGTCCT AGAGAGAGTGGAAGGGGGAGGAGCAGCTCACCAGTCGGCGGAAGGTCGTGGAGAAGGAAGGCCAGCGAGACGGAC GGAGTTGTGAAGATGCTAACCTGGCGATAGTGTGAGTGCGTCTTGGCCGACACTTGCGCCCACTCGGCCACCTGG ACCTCGGGAGGCGTGCCGACGGTGACGAGCGCCGAGAGCAGCCCCCGCATCACCGTCACACTGACCGGGCCCTCG ACCCGGACGACGCCGGGCTCGGGGACGCCGACGGTGACCTATGTCAGTGGCTCGAGCCGTGCGTCTACGGCCTCG GGCTCGCCTTCGAGCGACGGCCGTGATGACTCGACCAGCGGCCGCGTGACGGCCACCCCGTCGAGCTCGTCCTCT TCGGAAGCCAAGACGGAAACGAGGAAGTCGCAGGCCAGCTCCGGAGAATCGTCGTCGACCGTCGCGCCCGACCCG GGCAGCCCGACCGGGTCGACAACCACGTCGTCCGGCTTCCCGGGGCAGACGGGCCCGTCGTCGGGCATCCGGCAG CCCAGCTCGGGCCTCACAGCGTCGACGGTTTCGGGCGGTGGGCGCTGGAACACTTCCAGCACGGCGGCGTCGTCC TCGTCGAACTCGGGCGCGCCGACTGCGTCGTCGGATCCAGACGGCGCCGGGTCGACGACGTCGTTGACCTCCGCC GAGACGCAGACGAGATGGAACTCGTCGTCGTCTTCGCGCGTCGGAACAGGAGCAGCAACAACCTCCGGCACCGGG GTGGCCTCGAGCCCGGCCGGGACGGCGACGGGCTCCGACACCAGCGGCGCCGGGGGCCCCGGCGCGACGGTGGCC CCCACGCCGCTTCCGGCCGAGAACTTCACGCAGGTGACGCGGGCCGGGGCGGTGACGGAGCGGACGTGCTACCAC CTGCCGGCGGACCCGGTGCGCGGCCCGAGCCGGCGGGCGACGCCGCACAACGACGAGCTGCGCGAGGGCAACTAC ACGATCCCGGTGCCGTACATCGAGTCGGTCGACTTTGGCGCCGACGGCGTGGCGCCGCTGTTCCTGACGCTGCGC GACGCCGCCAACGGGACGCACTACATCGACGTCTCGCGCCGCGACCGCGTCTCCATCGTCGACTCGCTCGGCAAC GCCATGCTGCTCGACGGCCGCGGCATCCACTTCTCCACCAACAGCTGCCGCTGGGACGTGTCCATCGCCGTCGAC GGCCTGTACCAGCAGCTGGCGGACCTGTCGGGCCACGTCTGCTCCAAGGGCCGGCTGGCGGAGCGTCAGGAGCAG CAGCAGCAGCAGCAGGGGCCGGCCCCCCCCGGAGAGGCGCACTTCCGGCAGACGGTGTACCTGCGCGACCAGTGC GGCACGGCCGTCGGCCGGGCGGTGCGCAAGTACCCGCTGCTGAGGGTGGGCGCCACCGAGTGTCTCGAGGCCGAG GTCGACGAGGCCGGCGGCCGGTGGGTCTTCGACTGCCCGTTCCCGGGCTCCGACTCGGCGGCGGCCCGGTGCCGG CGGGCTGCGCGCGCCGGCATCTTCAAGTTCCTCTTCGTCGCGCCCTTCGGCGGCGCCTGCCCCGACCTGTCGACC GTCATCACGACGCTCGAGTCGGACAGCAAGGACTTCCTCAACGCCGACTCGCTGCGCGCCGGCCTGTACGCCCAG GGCCTCGACGCCGGCCAGCGCGCCGAGGCCGACCTGGCCGTCATGTACTACGAGCAGCTGTGGGAGCTGCTCAAG CAGGCCTTCTCGCGCTCCCGCACCAGCCCGCCCGGCGTCGCCAGCGCCGTCCAGGAGTACATCGACACCTACCGC TCGCTGCGCGACTTCGACGACGACCTGTGCCGCGACCTGCACGCCCCGGACCCGCCCCTGAACCTGAGCCTGCGC GCCGGCGCCTCCGACCTGCCGGCCGTCGCCGCCTTGGCCGCTGCCCCGCCCGCGCCGCCGCCGCCGCTCAACCTC ACCGTCCAGGACCCGGCCCAGGTCGCCTGCTGCCCGCGCGGGAGCGTCTCCAGCTTCGGCCGGGGCTCCGGCGCC TGTGCCTACCCGGACTCGGCCATCATCGGCGACTCGGGCTGCGTCTGCGGCCGCACCGCCTCCAACGCCTCCGTC GCCTTCGAGTACACCGAGTGCAACAACTTTGTCGCCCGCTGCTCTGTCGACGCCGACTGTGACGTCGACGCACAT CCGGGCTTCGTCTGTCTCATCGGGAGCTGCTGCGGCGGCGGCGTCTGCGTCGACCCTTATGAATGTTCTCGCAAC GGAACCGGCCTGATCCGCAGGCTGGCCATGTAG |