© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|4206 |
| Gene name | |
| Location | Contig_2168:42..2698 |
| Strand | - |
| Gene length (bp) | 2656 |
| Transcript length (bp) | 2307 |
| Coding sequence length (bp) | 2307 |
| Protein length (aa) | 769 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03200 | Glyco_hydro_63 | Glycosyl hydrolase family 63 C-terminal domain | 1.1E-145 | 303 | 768 |
| PF16923 | Glyco_hydro_63N | Glycosyl hydrolase family 63 N-terminal domain | 1.6E-78 | 38 | 265 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14255|GCS1_SCHPO | Probable mannosyl-oligosaccharide glucosidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6G10.09 PE=3 SV=1 | 30 | 768 | 0.0E+00 |
| sp|P53008|CWH41_YEAST | Mannosyl-oligosaccharide glucosidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CWH41 PE=1 SV=1 | 2 | 768 | 6.0E-165 |
| sp|Q80UM7|MOGS_MOUSE | Mannosyl-oligosaccharide glucosidase OS=Mus musculus GN=Mogs PE=1 SV=1 | 39 | 768 | 7.0E-115 |
| sp|Q13724|MOGS_HUMAN | Mannosyl-oligosaccharide glucosidase OS=Homo sapiens GN=MOGS PE=1 SV=5 | 39 | 768 | 2.0E-110 |
| sp|O88941|MOGS_RAT | Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus GN=Mogs PE=1 SV=1 | 39 | 768 | 2.0E-107 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14255|GCS1_SCHPO | Probable mannosyl-oligosaccharide glucosidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6G10.09 PE=3 SV=1 | 30 | 768 | 0.0E+00 |
| sp|P53008|CWH41_YEAST | Mannosyl-oligosaccharide glucosidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CWH41 PE=1 SV=1 | 2 | 768 | 6.0E-165 |
| sp|Q80UM7|MOGS_MOUSE | Mannosyl-oligosaccharide glucosidase OS=Mus musculus GN=Mogs PE=1 SV=1 | 39 | 768 | 7.0E-115 |
| sp|Q13724|MOGS_HUMAN | Mannosyl-oligosaccharide glucosidase OS=Homo sapiens GN=MOGS PE=1 SV=5 | 39 | 768 | 2.0E-110 |
| sp|O88941|MOGS_RAT | Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus GN=Mogs PE=1 SV=1 | 39 | 768 | 2.0E-107 |
| sp|F4HTM3|GCS1_ARATH | Mannosyl-oligosaccharide glucosidase GCS1 OS=Arabidopsis thaliana GN=GCS1 PE=1 SV=1 | 35 | 768 | 3.0E-105 |
| sp|Q84M89|GCS2_ARATH | Alpha-glucosidase 2 OS=Arabidopsis thaliana GN=GCS2 PE=2 SV=1 | 37 | 768 | 2.0E-99 |
| sp|Q19426|MOGS1_CAEEL | Mannosyl-oligosaccharide glucosidase OS=Caenorhabditis elegans GN=mogs-1 PE=1 SV=2 | 36 | 768 | 3.0E-89 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1403 | 0.0351 | 0.7282 | 0.0546 | 0.3017 | 0.0815 | 0.6142 | 0.3775 | 0.3645 | 0.004 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 20 | 0.999564 |
| Orthofinder run ID | 4 |
| Orthogroup | 2696 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|4206 MAKLARLLAAAASLAVGASAAGGEPSLTGEADRLNNQSLLWGPYKPNLYFGVRPRVPKGLWTGLMWGRMEQYEDV KDGFRYTCEQGPDMHGYGWDEYDARTGGVQSIHDEGNNIDLTTSFVKVPGGQHGGSWAARIRGRPRGDAPETLKT TVYYYIAQEGEGDLEAVVEDGAEAGLDGDATFRGWSAPLGNYSLVVTKGDGRHPTSDHEISAARPADKTVVFSQD ADEELLWQAKALLFQQLQKTSAQVQETYDAEDLPPPWQVYRIGHRPGRGNVHMVQKTFEGPFEFDVIFSSGSAGK RLTSAEVTQAIRRTSESFGRRFSRVFELQAPFRADKYQAFAKSMFSNLLGGVGYFHGEQLVDRSYAPEYDEDGEG FWAEAAEARARGAQKLEGPYELLTSVPSRPFFPRGFLWDEGFHLMAIADWDLDLALEMVESWFGAMDEDGWIPRE QILGAEARSKVPEEFQVQYPHYANPPTLFLVVEAFVERLARVKSGRDKESGSDRSGPYAAHLERGGALGEEYLRR LYPLLRRQYDWFRRTQRGEVRAYEREAYSSREAYRWRGRTETHCLTSGLDDYPRPQPPHPGELHVDLLSWVGLMT RSLMRTASALGMAEEASELGERLEAVERNLADLHWSEREGCYCDATIDEFEEHRLVCHKGYVSLFPLLAGLLRPD EPRLGRLLELMGDERQVWSAHGLRSLSRADELYGTGENYWRSPVWMPLNYMAVTQLHSIATTNGPFQAKARELYG RLRRNLVETVYKSWAETG* |
| Coding | >Hirsu2|4206 ATGGCCAAACTCGCACGACTCCTTGCGGCGGCCGCGTCGCTAGCGGTCGGCGCCTCGGCTGCGGGCGGCGAGCCG AGCCTGACGGGCGAGGCCGACCGCCTCAACAACCAGAGCCTGCTGTGGGGGCCGTACAAGCCCAATCTGTATTTC GGCGTCCGGCCCAGGGTGCCCAAGGGCCTCTGGACCGGCCTCATGTGGGGGAGGATGGAGCAGTACGAGGACGTC AAGGACGGATTTCGATACACGTGTGAGCAGGGCCCGGACATGCACGGCTACGGCTGGGACGAGTACGACGCGCGA ACCGGCGGCGTGCAGTCGATCCACGACGAGGGCAACAACATCGACCTCACCACCTCGTTCGTCAAGGTGCCGGGC GGACAGCACGGGGGCAGCTGGGCCGCCAGGATCCGCGGGCGGCCGCGGGGTGACGCGCCGGAGACGCTGAAAACG ACTGTCTACTACTACATCGCGCAGGAGGGCGAGGGGGACCTCGAGGCCGTGGTCGAGGACGGCGCCGAGGCGGGT CTCGACGGCGACGCCACCTTCCGCGGCTGGTCGGCGCCGCTGGGCAACTACAGCCTGGTGGTGACCAAGGGAGAC GGGCGGCATCCTACGAGCGATCACGAGATATCGGCCGCGCGGCCGGCGGACAAGACGGTCGTCTTCAGCCAGGAC GCGGACGAGGAACTGCTGTGGCAGGCCAAGGCGCTCCTCTTCCAGCAGCTCCAGAAGACGTCGGCGCAGGTGCAG GAGACGTACGACGCCGAGGACCTGCCGCCGCCGTGGCAGGTCTACCGCATCGGCCATCGGCCCGGCAGGGGCAAC GTGCACATGGTGCAGAAGACGTTCGAGGGCCCCTTCGAGTTCGACGTCATCTTCTCGTCGGGCTCGGCGGGCAAG CGGCTGACGTCGGCCGAAGTGACGCAGGCGATCCGGCGGACGTCGGAATCGTTCGGCCGGCGCTTCTCGCGCGTC TTCGAGCTGCAGGCGCCCTTCCGGGCGGACAAGTACCAGGCCTTCGCCAAGAGCATGTTCTCGAACCTGCTCGGC GGCGTCGGCTACTTCCACGGCGAGCAGCTGGTGGACCGGTCCTACGCGCCCGAGTACGACGAGGACGGCGAGGGC TTCTGGGCCGAGGCGGCGGAGGCGCGGGCGCGGGGCGCGCAGAAGCTCGAGGGGCCGTACGAGCTCCTGACGAGC GTCCCGTCGCGGCCCTTCTTCCCGCGCGGCTTCCTGTGGGACGAGGGCTTCCACCTGATGGCGATTGCCGACTGG GACCTGGACCTGGCGCTCGAGATGGTCGAGAGCTGGTTCGGCGCCATGGACGAGGACGGGTGGATCCCGCGCGAG CAGATCCTGGGGGCCGAGGCGCGCAGCAAGGTGCCGGAGGAGTTCCAGGTGCAGTACCCGCACTACGCCAACCCG CCGACGCTGTTCCTCGTCGTCGAGGCCTTTGTCGAGCGGCTCGCCAGGGTCAAGTCGGGGCGGGACAAGGAGTCG GGGTCGGACAGGTCGGGCCCCTACGCGGCGCACCTGGAGCGGGGGGGCGCCCTCGGGGAGGAGTACCTGCGCCGG CTGTACCCGCTGCTCCGGCGGCAGTACGACTGGTTCCGGCGGACGCAGCGGGGCGAGGTGCGGGCGTACGAGCGC GAGGCGTACTCGAGCCGGGAGGCGTACCGGTGGCGCGGGCGGACGGAGACGCACTGCCTGACGAGCGGGCTGGAC GACTACCCGCGACCGCAGCCGCCGCACCCGGGGGAGCTGCACGTGGACCTGCTGTCGTGGGTCGGGCTGATGACG CGGTCGCTGATGCGGACGGCGTCGGCGCTCGGCATGGCCGAGGAGGCGTCGGAGCTGGGGGAGAGGCTCGAGGCG GTGGAGCGCAACCTGGCGGACCTGCACTGGTCGGAGCGGGAGGGGTGCTACTGCGACGCGACGATTGACGAGTTC GAGGAGCACCGGCTGGTCTGCCACAAGGGCTATGTGTCGCTGTTCCCGCTGCTGGCCGGGCTGCTGCGGCCGGAC GAGCCGAGGCTGGGCCGGCTGCTGGAGCTGATGGGCGACGAGCGGCAGGTGTGGAGCGCGCATGGGCTGCGCAGC CTGAGTCGAGCGGACGAGCTGTACGGGACGGGAGAGAACTATTGGAGGAGCCCGGTGTGGATGCCTCTCAACTAC ATGGCCGTGACGCAGCTTCACAGCATCGCCACGACAAACGGGCCTTTTCAGGCCAAGGCGCGGGAGCTGTACGGG CGGCTGCGGCGCAACCTGGTCGAGACGGTTTACAAGAGTTGGGCCGAGACGGGTTGA |
| Transcript | >Hirsu2|4206 ATGGCCAAACTCGCACGACTCCTTGCGGCGGCCGCGTCGCTAGCGGTCGGCGCCTCGGCTGCGGGCGGCGAGCCG AGCCTGACGGGCGAGGCCGACCGCCTCAACAACCAGAGCCTGCTGTGGGGGCCGTACAAGCCCAATCTGTATTTC GGCGTCCGGCCCAGGGTGCCCAAGGGCCTCTGGACCGGCCTCATGTGGGGGAGGATGGAGCAGTACGAGGACGTC AAGGACGGATTTCGATACACGTGTGAGCAGGGCCCGGACATGCACGGCTACGGCTGGGACGAGTACGACGCGCGA ACCGGCGGCGTGCAGTCGATCCACGACGAGGGCAACAACATCGACCTCACCACCTCGTTCGTCAAGGTGCCGGGC GGACAGCACGGGGGCAGCTGGGCCGCCAGGATCCGCGGGCGGCCGCGGGGTGACGCGCCGGAGACGCTGAAAACG ACTGTCTACTACTACATCGCGCAGGAGGGCGAGGGGGACCTCGAGGCCGTGGTCGAGGACGGCGCCGAGGCGGGT CTCGACGGCGACGCCACCTTCCGCGGCTGGTCGGCGCCGCTGGGCAACTACAGCCTGGTGGTGACCAAGGGAGAC GGGCGGCATCCTACGAGCGATCACGAGATATCGGCCGCGCGGCCGGCGGACAAGACGGTCGTCTTCAGCCAGGAC GCGGACGAGGAACTGCTGTGGCAGGCCAAGGCGCTCCTCTTCCAGCAGCTCCAGAAGACGTCGGCGCAGGTGCAG GAGACGTACGACGCCGAGGACCTGCCGCCGCCGTGGCAGGTCTACCGCATCGGCCATCGGCCCGGCAGGGGCAAC GTGCACATGGTGCAGAAGACGTTCGAGGGCCCCTTCGAGTTCGACGTCATCTTCTCGTCGGGCTCGGCGGGCAAG CGGCTGACGTCGGCCGAAGTGACGCAGGCGATCCGGCGGACGTCGGAATCGTTCGGCCGGCGCTTCTCGCGCGTC TTCGAGCTGCAGGCGCCCTTCCGGGCGGACAAGTACCAGGCCTTCGCCAAGAGCATGTTCTCGAACCTGCTCGGC GGCGTCGGCTACTTCCACGGCGAGCAGCTGGTGGACCGGTCCTACGCGCCCGAGTACGACGAGGACGGCGAGGGC TTCTGGGCCGAGGCGGCGGAGGCGCGGGCGCGGGGCGCGCAGAAGCTCGAGGGGCCGTACGAGCTCCTGACGAGC GTCCCGTCGCGGCCCTTCTTCCCGCGCGGCTTCCTGTGGGACGAGGGCTTCCACCTGATGGCGATTGCCGACTGG GACCTGGACCTGGCGCTCGAGATGGTCGAGAGCTGGTTCGGCGCCATGGACGAGGACGGGTGGATCCCGCGCGAG CAGATCCTGGGGGCCGAGGCGCGCAGCAAGGTGCCGGAGGAGTTCCAGGTGCAGTACCCGCACTACGCCAACCCG CCGACGCTGTTCCTCGTCGTCGAGGCCTTTGTCGAGCGGCTCGCCAGGGTCAAGTCGGGGCGGGACAAGGAGTCG GGGTCGGACAGGTCGGGCCCCTACGCGGCGCACCTGGAGCGGGGGGGCGCCCTCGGGGAGGAGTACCTGCGCCGG CTGTACCCGCTGCTCCGGCGGCAGTACGACTGGTTCCGGCGGACGCAGCGGGGCGAGGTGCGGGCGTACGAGCGC GAGGCGTACTCGAGCCGGGAGGCGTACCGGTGGCGCGGGCGGACGGAGACGCACTGCCTGACGAGCGGGCTGGAC GACTACCCGCGACCGCAGCCGCCGCACCCGGGGGAGCTGCACGTGGACCTGCTGTCGTGGGTCGGGCTGATGACG CGGTCGCTGATGCGGACGGCGTCGGCGCTCGGCATGGCCGAGGAGGCGTCGGAGCTGGGGGAGAGGCTCGAGGCG GTGGAGCGCAACCTGGCGGACCTGCACTGGTCGGAGCGGGAGGGGTGCTACTGCGACGCGACGATTGACGAGTTC GAGGAGCACCGGCTGGTCTGCCACAAGGGCTATGTGTCGCTGTTCCCGCTGCTGGCCGGGCTGCTGCGGCCGGAC GAGCCGAGGCTGGGCCGGCTGCTGGAGCTGATGGGCGACGAGCGGCAGGTGTGGAGCGCGCATGGGCTGCGCAGC CTGAGTCGAGCGGACGAGCTGTACGGGACGGGAGAGAACTATTGGAGGAGCCCGGTGTGGATGCCTCTCAACTAC ATGGCCGTGACGCAGCTTCACAGCATCGCCACGACAAACGGGCCTTTTCAGGCCAAGGCGCGGGAGCTGTACGGG CGGCTGCGGCGCAACCTGGTCGAGACGGTTTACAAGAGTTGGGCCGAGACGGGTTGA |
| Gene | >Hirsu2|4206 ATGGCCAAACTCGCACGACTCCTTGCGGCGGCCGCGTCGCTAGCGGTCGGCGCCTCGGCTGCGGGCGGCGAGCCG AGCCTGACGGGCGAGGCCGACCGCCTCAACAACCAGAGCCTGCTGTGGGGGCCGTACAAGCCCAATCTGTATTTC GGCGTCCGGCCCAGGGTGCCCAAGGGCCTCTGGACCGGCCTCATGTGGGGGAGGATGGAGCAGTACGAGGACGTC AAGGACGGTTCGTTCGCCCCTTTTCTGCTGTCCTCTCGTCACCGGCCGGCGGCCCCATCTGATGGGCTCGTGCCT TTAGGATTTCGATACACGTGTGAGCAGGGCCCGGACATGCACGGCTACGGCTGGGACGAGTACGACGCGCGAACC GGCGGCGTGCAGTCGATCCACGACGAGGGCAACAACATCGACCTCACCACCTCGTTCGTCAAGGTGCCGGGCGGA CAGCACGGGGGCAGCTGGGCCGCCAGGATCCGCGGGCGGCCGCGGGGTGACGCGCCGGAGACGCTGAAAACGACT GTCTACTACTACATCGCGCAGGAGGGCGAGGGGGACCTCGAGGCCGTGGTCGAGGACGGCGCCGAGGCGGGTCTC GACGGCGACGCCACCTTCCGCGGCTGGTCGGCGCCGCTGGGCAACTACAGCCTGGTGGTGACCAAGGGAGACGGG CGGCATCCTACGAGCGATCACGAGATATCGGCCGCGCGGCCGGCGGACAAGACGGTCGTCTTCAGCCAGGACGCG GACGAGGAACTGCTGTGGCAGGCCAAGGCGCTCCTCTTCCAGCAGCTCCAGAAGACGTCGGCGCAGGTGCAGGAG ACGTACGACGCCGAGGACCTGCCGCCGCCGTGGCAGGTCTACCGCATCGGCCATCGGCCCGGCAGGGGCAACGTG CACATGGTGCAGAAGACGTTCGAGGGCCCCTTCGAGTTCGACGTCATCTTCTCGTCGGGCTCGGCGGGCAAGCGG CTGACGTCGGCCGAAGTGACGCAGGCGATCCGGCGGACGTCGGAATCGTTCGGCCGGCGCTTCTCGCGCGTCTTC GAGCTGCAGGCGCCCTTCCGGGCGGACAAGTACCAGGCCTTCGCCAAGAGCATGTTCTCGAACCTGCTCGGCGGC GTCGGCTACTTCCACGGCGAGCAGCTGGTGGACCGGTCCTACGCGCCCGAGTACGACGAGGACGGCGAGGGCTTC TGGGCCGAGGCGGCGGAGGCGCGGGCGCGGGGCGCGCAGAAGCTCGAGGGGCCGTACGAGCTCCTGACGAGCGTC CCGTCGCGGCCCTTCTTCCCGCGCGGCTTCCTGTGGGACGAGGGCTTCCACCTGATGGCGATTGCCGACTGGGAC CTGGACCTGGCGCTCGAGATGGTCGAGAGCTGGTTCGGCGCCATGGACGAGGACGGGTGGATCCCGCGCGAGCAG ATCCTGGGGGCCGAGGCGCGCAGCAAGGTGCCGGAGGAGTTCCAGGTGCAGTACCCGCACTACGCCAACCCGCCG ACGCTGTTCCTCGTCGTCGAGGCCTTTGTCGAGCGGCTCGCCAGGGTCAAGTCGGGGCGGGACAAGGAGTCGGGG TCGGACAGGTCGGGCCCCTACGCGGCGCACCTGGAGCGGGGGGGCGCCCTCGGGGAGGAGTACCTGCGCCGGCTG TACCCGCTGCTCCGGCGGCAGTACGACTGGTTCCGGCGGACGCAGCGGGGCGAGGTGCGGGCGTACGAGCGCGAG GCGTACTCGAGCCGGGAGGCGTACCGGTGGCGCGGGCGGACGGAGACGCACTGCCTGACGAGCGGGCTGGACGAC TACCCGCGACCGCAGCCGCCGCACCCGGGGGAGCTGCACGTGGACCTGCTGTCGTGGGTCGGGCTGATGACGCGG TCGCTGATGCGGACGGCGTCGGCGCTCGGCATGGCCGAGGAGGCGTCGGAGCTGGGGGAGAGGCTCGAGGCGGTG GAGCGCAACCTGGCGGACCTGCACTGGTCGGAGCGGGAGGGGTGCTACTGCGACGCGACGATTGACGAGTTCGAG GAGCACCGGCTGGTCTGCCACAAGGGCTATGTGTCGCTGTTCCCGCTGCTGGCCGGGCTGCTGCGGCCGGACGAG CCGAGGCTGGGCCGGCTGCTGGAGCTGATGGGCGACGAGCGGCAGGTGTGGAGCGCGCATGGGCTGCGCAGCCTG AGTCGAGCGGACGAGCTGTACGGGACGGGAGAGAACTATTGGAGGAGCCCGGTGTGGATGCCTCTCAACTACATG GCCGTGACGCAGCTTCACGTAAGGCTGAGTCTCGCCCCCTCCGTCCCCCCCCTTTCCCCCCCCTCGGTTTTTTTT GTTTTTTTTTTTTTTTTGCTCCCCCTGACTCCCTCACTCCCTCTGTGTCTGTGTCTCTCGGCCCCCTCGACCGAG TTTGCGGCGCGGACGTTGTTGGCAGGCGGCTAACGGGCTGTTGGGTCCTCGCACCGGCAGAGCATCGCCACGACA AACGGGCCTTTTCAGGCCAAGGCGCGGGAGCTGTACGGGCGGCTGCGGCGCAACCTGGTCGAGACGGTTTACAAG AGTTGGGCCGAGACGGGGTTCGCGTGGGAGCAGTACAGCCCCGAGACGGGGGCCGGGCAGCGGACGCAGCACTTT ACCGGCTGGACCAGCCTGGTGGTCAAGTTGA |