Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4199
Gene name
LocationContig_216:26711..27583
Strand-
Gene length (bp)872
Transcript length (bp)399
Coding sequence length (bp)399
Protein length (aa) 133

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.5

Transmembrane Domains

Domain # Start End Length
1 15 34 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4199
MASCQLPSHNPDAAAAAVAAAAAAAAIVSIVAASQQQTQFLAKPIDRRGHETKHASDPSILSIATSCPPKHGFAI
EPLDNPFRPHLSTLSLTLSLSLPSIPSRKPTTTTERQRRPRLSRRRQVDLLCVYELA*
Coding >Hirsu2|4199
ATGGCGTCTTGCCAGCTGCCGAGTCACAACCCAGACGCCGCCGCCGCCGCCGTCGCCGCCGCCGCCGCCGCCGCC
GCCATCGTCTCCATCGTCGCCGCCTCGCAGCAACAGACGCAATTCCTCGCCAAGCCGATTGACCGTCGCGGCCAC
GAGACCAAGCACGCAAGCGACCCCAGCATCCTCAGCATAGCAACGAGCTGCCCGCCAAAGCATGGATTCGCGATA
GAGCCTCTCGACAACCCGTTCCGACCCCACCTGTCCACCCTCTCTCTCACTCTGTCTCTCTCTCTCCCCTCTATC
CCTTCAAGGAAGCCCACGACGACGACGGAACGACAACGACGACCAAGACTCAGCCGCCGACGCCAAGTCGACCTC
CTCTGCGTCTACGAGCTAGCCTGA
Transcript >Hirsu2|4199
ATGGCGTCTTGCCAGCTGCCGAGTCACAACCCAGACGCCGCCGCCGCCGCCGTCGCCGCCGCCGCCGCCGCCGCC
GCCATCGTCTCCATCGTCGCCGCCTCGCAGCAACAGACGCAATTCCTCGCCAAGCCGATTGACCGTCGCGGCCAC
GAGACCAAGCACGCAAGCGACCCCAGCATCCTCAGCATAGCAACGAGCTGCCCGCCAAAGCATGGATTCGCGATA
GAGCCTCTCGACAACCCGTTCCGACCCCACCTGTCCACCCTCTCTCTCACTCTGTCTCTCTCTCTCCCCTCTATC
CCTTCAAGGAAGCCCACGACGACGACGGAACGACAACGACGACCAAGACTCAGCCGCCGACGCCAAGTCGACCTC
CTCTGCGTCTACGAGCTAGCCTGA
Gene >Hirsu2|4199
ATGGCGTCTTGCCAGCTGCCGAGGTGCGAGCGGGCGTGGCCGCCGGGTCACGGTACCCGCTGACGGTTCCTCCCC
ATCCCGCCCATGGGCAGGCAGCTGACAGCGCCGTGCTCCACCGCCGGCAGCAGCTAGGCCGGCGGCAGCGAAAGC
CAGCAGCAGCAGCTAAGGCTAAAGGCTAGCAGCCTAGCACCCAAGGGCCGGGCCAAGGCTACCTCGCTTAGGTGC
CAGCCGCAGCTGCGCAAGCCTCAAGCCACCATCACCAGCTGCTCAAGCCACCACCTTTCGGTTGCAACCGCTGCT
GCTCAACAACCGGCCCCCCCCTTTTCCCCAATCTTGCCTCCTCCGCCCGCCCGCCCGCCCGCCATTTTCGCCCCC
TTCCTTTCTTCTTTTCCCATCTTCCCGTCCCCCTCCCGCTTCCATTTCCGATTGTCTCGATTTCCTTATCTTGCT
TGGTCTGCATCACATGCCGCTCCCGTGACCTCGCCTGTCTCACAAGTCACAACCCAGACGCCGCCGCCGCCGCCG
TCGCCGCCGCCGCCGCCGCCGCCGCCATCGTCTCCATCGTCGCCGCCTCGCAGCAACAGACGCAATTCCTCGCCA
AGCCGATTGACCGTCGCGGCCACGAGACCAAGCACGCAAGCGACCCCAGCATCCTCAGCATAGCAACGAGCTGCC
CGCCAAAGCATGGATTCGCGATAGAGCCTCTCGACAACCCGTTCCGACCCCACCTGTCCACCCTCTCTCTCACTC
TGTCTCTCTCTCTCCCCTCTATCCCTTCAAGGAAGCCCACGACGACGACGGAACGACAACGACGACCAAGACTCA
GCCGCCGACGCCAAGTCGACCTCCTCTGCGTCTACGAGCTAGCCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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