Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4187
Gene name
LocationContig_2157:278..1932
Strand+
Gene length (bp)1654
Transcript length (bp)1428
Coding sequence length (bp)1428
Protein length (aa) 476

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 2.6E-38 45 422

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 25 463 1.0E-72
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 13 474 2.0E-68
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 5 421 8.0E-66
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 19 467 8.0E-58
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 30 422 4.0E-50
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Swissprot ID Swissprot Description Start End E-value
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 25 463 1.0E-72
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 13 474 2.0E-68
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 5 421 8.0E-66
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 19 467 8.0E-58
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 30 422 4.0E-50
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 6 471 5.0E-49
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 30 422 1.0E-46
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 25 447 4.0E-39
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 13 358 3.0E-34
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 30 469 5.0E-34
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 13 463 2.0E-33
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 20 445 6.0E-32
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 26 472 5.0E-31
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 26 464 6.0E-31
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 18 270 4.0E-30
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 5 443 1.0E-26
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 12 443 2.0E-26
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 2 464 2.0E-26
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 12 365 1.0E-25
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 29 473 2.0E-24
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 5 445 4.0E-23
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 5 465 3.0E-21
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 26 252 9.0E-19
sp|P0AA76|DGOT_ECOLI D-galactonate transporter OS=Escherichia coli (strain K12) GN=dgoT PE=1 SV=1 42 463 2.0E-18
sp|P0AA77|DGOT_ECOL6 D-galactonate transporter OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=dgoT PE=3 SV=1 42 463 2.0E-18
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 7 463 3.0E-17
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 7 310 7.0E-14
sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 41 359 7.0E-14
sp|O30513|BENK_ACIAD Benzoate transport protein OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=benK PE=3 SV=2 109 474 2.0E-12
sp|P39398|LGOT_ECOLI Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 13 215 1.0E-11
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 113 262 1.0E-09
sp|P42237|GUDP_BACSU Probable glucarate transporter OS=Bacillus subtilis (strain 168) GN=gudP PE=3 SV=2 44 322 2.0E-07
sp|Q46916|GUDP_ECOLI Probable glucarate transporter OS=Escherichia coli (strain K12) GN=gudP PE=1 SV=1 41 424 5.0E-07
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 11 267 5.0E-07
sp|P42205|GUDP_PSEPU Probable glucarate transporter OS=Pseudomonas putida GN=gudP PE=3 SV=1 36 162 6.0E-06
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0031224 intrinsic component of membrane No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0051179 localization No
GO:0051234 establishment of localization No
GO:0044425 membrane part No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 63 0.5

Transmembrane Domains

Domain # Start End Length
1 41 63 22
2 78 100 22
3 107 126 19
4 136 158 22
5 167 189 22
6 200 222 22
7 283 305 22
8 315 337 22
9 344 366 22
10 371 393 22
11 405 427 22
12 437 459 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4187
MGLPEDDVSTEFNSTAPEPEPGHGLSAAEEARLLRRIDVALLPMLFLIYVVAFLDRANIANALTMGMPHELGLTG
QQPNAALAVFFVPYILLEIPSNMLLRRVTPRIWLSLCILGFGLVMLAQGFVRGYGGLLATRFLLGIFEAGIFPGS
FYLISFWYRRAEAQKRFTLYFCSVIVASAFGGLLASAIARMDGVAGLSNWRWVFILEGILSVAVAAASFFCLSDF
PEQARWLSARERLCVLQRTGRAPSQQQQQQQQGQAVEQDKLTRRDLVAFFKDPKNHLGALMYFCVVVPVYAFAYF
TPTIVKTLGYSAVQTQLYSVPPFATALGLCLIQAYLSDRTNLRLPYVLSSGALLISGLAVLMTTHGRFSAQYAGL
CLICVGAFSAAPTVICWYLMNLDGHRQRSIGSGWMISFGNTGGILAPFAFLQSDAPEYRPGYAMCMAVAVLGMVT
ALAYGLMVVRERRSATAASRTPPAL*
Coding >Hirsu2|4187
ATGGGACTGCCGGAGGATGACGTCAGTACCGAGTTCAACTCGACGGCGCCCGAGCCCGAGCCCGGCCACGGCCTA
TCGGCGGCCGAGGAGGCCCGGCTGCTGCGCCGCATCGACGTCGCCCTGCTGCCGATGCTCTTCCTCATCTACGTC
GTCGCCTTTCTCGACCGAGCCAACATAGCCAACGCGCTCACGATGGGGATGCCGCACGAGCTGGGCCTGACGGGC
CAGCAGCCCAACGCGGCGCTGGCCGTCTTCTTCGTGCCGTACATCCTGCTGGAGATCCCGTCCAACATGCTGCTT
CGGCGGGTGACGCCGCGGATCTGGCTCTCGCTCTGCATCCTCGGCTTCGGCCTCGTGATGCTGGCGCAGGGCTTC
GTGCGCGGCTACGGCGGCCTGCTGGCGACGCGGTTCCTGCTCGGCATCTTCGAGGCCGGCATCTTCCCCGGCAGC
TTCTACCTCATCAGCTTCTGGTACCGGCGCGCCGAGGCCCAGAAGCGCTTCACCCTGTACTTCTGCTCCGTCATC
GTCGCCTCCGCCTTTGGCGGCCTGCTGGCCTCGGCCATCGCCCGCATGGACGGCGTCGCCGGCCTGAGCAACTGG
CGCTGGGTCTTCATCCTCGAGGGCATCCTCTCCGTCGCCGTCGCCGCCGCCTCCTTCTTCTGCCTCAGCGACTTC
CCCGAGCAGGCCCGCTGGCTGTCGGCGCGCGAGAGGCTGTGCGTGCTGCAGCGGACGGGGCGGGCGCCGTCGCAA
CAGCAGCAGCAGCAGCAGCAAGGCCAGGCTGTCGAGCAAGACAAGCTGACGAGGCGAGACTTGGTCGCGTTTTTC
AAAGACCCCAAGAACCACCTGGGCGCCCTCATGTACTTTTGCGTCGTGGTGCCCGTCTACGCCTTCGCCTACTTC
ACGCCCACCATCGTCAAGACGCTCGGCTACTCGGCCGTGCAGACGCAGCTGTACTCGGTGCCGCCCTTCGCCACG
GCGCTGGGCCTGTGCCTGATCCAGGCCTACCTGTCGGACCGGACCAACCTGCGGCTGCCGTACGTGCTGTCGTCG
GGCGCGCTGCTCATCAGCGGCCTGGCCGTCCTCATGACCACCCACGGCCGCTTCTCGGCCCAGTACGCCGGCCTG
TGCCTCATCTGCGTCGGCGCCTTCAGCGCCGCCCCCACCGTCATCTGCTGGTACCTGATGAACCTGGACGGGCAC
CGGCAGCGCAGCATCGGCTCGGGCTGGATGATCAGCTTCGGCAACACGGGCGGCATCCTGGCCCCCTTTGCCTTC
CTGCAGAGCGACGCGCCCGAGTACCGCCCGGGCTACGCCATGTGCATGGCCGTCGCCGTTCTGGGAATGGTCACC
GCGCTGGCCTACGGCCTGATGGTCGTCAGGGAGCGCCGCAGCGCCACCGCCGCGTCTCGAACGCCGCCGGCCTTG
TGA
Transcript >Hirsu2|4187
ATGGGACTGCCGGAGGATGACGTCAGTACCGAGTTCAACTCGACGGCGCCCGAGCCCGAGCCCGGCCACGGCCTA
TCGGCGGCCGAGGAGGCCCGGCTGCTGCGCCGCATCGACGTCGCCCTGCTGCCGATGCTCTTCCTCATCTACGTC
GTCGCCTTTCTCGACCGAGCCAACATAGCCAACGCGCTCACGATGGGGATGCCGCACGAGCTGGGCCTGACGGGC
CAGCAGCCCAACGCGGCGCTGGCCGTCTTCTTCGTGCCGTACATCCTGCTGGAGATCCCGTCCAACATGCTGCTT
CGGCGGGTGACGCCGCGGATCTGGCTCTCGCTCTGCATCCTCGGCTTCGGCCTCGTGATGCTGGCGCAGGGCTTC
GTGCGCGGCTACGGCGGCCTGCTGGCGACGCGGTTCCTGCTCGGCATCTTCGAGGCCGGCATCTTCCCCGGCAGC
TTCTACCTCATCAGCTTCTGGTACCGGCGCGCCGAGGCCCAGAAGCGCTTCACCCTGTACTTCTGCTCCGTCATC
GTCGCCTCCGCCTTTGGCGGCCTGCTGGCCTCGGCCATCGCCCGCATGGACGGCGTCGCCGGCCTGAGCAACTGG
CGCTGGGTCTTCATCCTCGAGGGCATCCTCTCCGTCGCCGTCGCCGCCGCCTCCTTCTTCTGCCTCAGCGACTTC
CCCGAGCAGGCCCGCTGGCTGTCGGCGCGCGAGAGGCTGTGCGTGCTGCAGCGGACGGGGCGGGCGCCGTCGCAA
CAGCAGCAGCAGCAGCAGCAAGGCCAGGCTGTCGAGCAAGACAAGCTGACGAGGCGAGACTTGGTCGCGTTTTTC
AAAGACCCCAAGAACCACCTGGGCGCCCTCATGTACTTTTGCGTCGTGGTGCCCGTCTACGCCTTCGCCTACTTC
ACGCCCACCATCGTCAAGACGCTCGGCTACTCGGCCGTGCAGACGCAGCTGTACTCGGTGCCGCCCTTCGCCACG
GCGCTGGGCCTGTGCCTGATCCAGGCCTACCTGTCGGACCGGACCAACCTGCGGCTGCCGTACGTGCTGTCGTCG
GGCGCGCTGCTCATCAGCGGCCTGGCCGTCCTCATGACCACCCACGGCCGCTTCTCGGCCCAGTACGCCGGCCTG
TGCCTCATCTGCGTCGGCGCCTTCAGCGCCGCCCCCACCGTCATCTGCTGGTACCTGATGAACCTGGACGGGCAC
CGGCAGCGCAGCATCGGCTCGGGCTGGATGATCAGCTTCGGCAACACGGGCGGCATCCTGGCCCCCTTTGCCTTC
CTGCAGAGCGACGCGCCCGAGTACCGCCCGGGCTACGCCATGTGCATGGCCGTCGCCGTTCTGGGAATGGTCACC
GCGCTGGCCTACGGCCTGATGGTCGTCAGGGAGCGCCGCAGCGCCACCGCCGCGTCTCGAACGCCGCCGGCCTTG
TGA
Gene >Hirsu2|4187
ATGGGACTGCCGGAGGATGACGTCAGTACCGAGTTCAACTCGACGGCGCCCGAGCCCGAGCCCGGCCACGGCCTA
TCGGCGGCCGAGGAGGCCCGGCTGCTGCGCCGCATCGACGTCGCCCTGCTGCCGATGCTCTTCCTCATCTACGTC
GTCGCCTTTCTCGACCGGTAAGCGCGTCTCTCCTCCCGCTTCGGCCAGCCGCTGAACGCCGCCTGATTTTCTTTT
CTTTTTTTTTTTTTGAAAAAAAAAAAAGAGCCAACATAGCCAACGCGCTCACGATGGGGATGCCGCACGAGCTGG
GCCTGACGGGCCAGCAGCCCAACGCGGCGCTGGCCGTCTTCTTCGTGCCGTACATCCTGCTGGAGATCCCGTCCA
ACATGCTGCTTCGGCGGGTGACGCCGCGGATCTGGCTCTCGCTCTGCATCCTCGGCTTCGGCCTCGTGATGCTGG
CGCAGGGCTTCGTGCGCGGCTACGGCGGCCTGCTGGCGACGCGGTTCCTGCTCGGCATCTTCGAGGCCGGCATCT
TCCCCGGCAGCTTCTACCTCATCAGCTTCTGGTACCGGCGCGCCGAGGCCCAGAAGCGCTTCACCCTGTACTTCT
GCTCCGTCATCGTCGCCTCCGCCTTTGGCGGCCTGCTGGCCTCGGCCATCGCCCGCATGGACGGCGTCGCCGGCC
TGAGCAACTGGCGCTGGGTCTTCATCCTCGAGGGCATCCTCTCCGTCGCCGTCGCCGCCGCCTCCTTCTTCTGCC
TCAGCGACTTCCCCGAGCAGGCCCGCTGGCTGTCGGCGCGCGAGAGGCTGTGCGTGCTGCAGCGGACGGGGCGGG
CGCCGTCGCAACAGCAGCAGCAGCAGCAGCAAGGCCAGGCTGTCGAGCAAGACAAGCTGACGAGGCGAGACTTGG
TCGCGTTTTTCAAAGACCCCAAGAACCACCTGGGCGCCCTCATGTACTTTTGTGCGTTCTCGCCCCCCCCCCCCC
TTTTCCCCTCTTCCCCTGCTCCCTTAACCCCCCCCTATTCTATCAATGGCACTGTTACAACCTTCGAGACCGAAG
GGACGATAGGCGAGGAGAGACTGACGAATCGGGGTCCGCAGGCGTCGTGGTGCCCGTCTACGCCTTCGCCTACTT
CACGCCCACCATCGTCAAGACGCTCGGCTACTCGGCCGTGCAGACGCAGCTGTACTCGGTGCCGCCCTTCGCCAC
GGCGCTGGGCCTGTGCCTGATCCAGGCCTACCTGTCGGACCGGACCAACCTGCGGCTGCCGTACGTGCTGTCGTC
GGGCGCGCTGCTCATCAGCGGCCTGGCCGTCCTCATGACCACCCACGGCCGCTTCTCGGCCCAGTACGCCGGCCT
GTGCCTCATCTGCGTCGGCGCCTTCAGCGCCGCCCCCACCGTCATCTGCTGGTACCTGATGAACCTGGACGGGCA
CCGGCAGCGCAGCATCGGCTCGGGCTGGATGATCAGCTTCGGCAACACGGGCGGCATCCTGGCCCCCTTTGCCTT
CCTGCAGAGCGACGCGCCCGAGTACCGCCCGGGCTACGCCATGTGCATGGCCGTCGCCGTTCTGGGAATGGTCAC
CGCGCTGGCCTACGGCCTGATGGTCGTCAGGGAGCGCCGCAGCGCCACCGCCGCGTCTCGAACGCCGCCGGCCTT
GTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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