Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4186
Gene name
LocationContig_2156:1460..2911
Strand-
Gene length (bp)1451
Transcript length (bp)720
Coding sequence length (bp)720
Protein length (aa) 240

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00249 Myb_DNA-binding Myb-like DNA-binding domain 3.4E-10 140 180

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 14 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4186
MHNHPYQQADMARRNERMEFPYGAPQPNMGAQQQHHPTPVQPPMNVPQQPPNAQPGSQQQTPTQTPAQPSRQRKR
PAPTAQSPATGAPPAPVTPSQVQPPAPTPPAPQSAPPGQAQAPAEDANATPAAPPPAKKSRTNTPWTPQEELRLK
QMRDAGNSWAEIAKTFPTRTEGSVKKHWYKDMHYAEFAEDESQALLNAIKEYENNKWKVIGQKVGKPAKACEQYA
KEHFPDLFGSTKGR*
Coding >Hirsu2|4186
ATGCACAACCACCCTTACCAGCAGGCCGACATGGCCCGTCGCAATGAGCGCATGGAGTTCCCCTACGGCGCCCCC
CAGCCCAACATGGGGGCTCAACAGCAGCATCACCCTACGCCCGTCCAGCCGCCCATGAACGTTCCGCAGCAGCCT
CCCAATGCGCAGCCTGGCAGTCAACAGCAGACGCCGACCCAGACACCGGCCCAGCCAAGCCGCCAGCGGAAGCGT
CCGGCCCCCACGGCCCAGTCCCCCGCAACAGGCGCACCTCCGGCTCCGGTTACGCCGAGCCAGGTTCAGCCTCCG
GCCCCGACGCCCCCCGCCCCTCAGTCCGCTCCGCCCGGCCAGGCCCAGGCGCCCGCCGAGGATGCCAACGCCACT
CCGGCCGCGCCGCCGCCTGCCAAGAAGAGCAGGACCAACACGCCATGGACCCCTCAGGAGGAGCTGCGTCTGAAG
CAGATGCGCGACGCCGGCAACAGCTGGGCGGAGATTGCAAAGACCTTTCCCACGAGAACAGAGGGCTCCGTCAAG
AAGCATTGGTACAAGGATATGCACTACGCCGAGTTTGCCGAGGATGAGAGCCAGGCTTTGTTGAACGCGATCAAG
GAGTACGAGAATAATAAGTGGAAGGTCATTGGCCAAAAGGTCGGCAAGCCAGCCAAGGCTTGCGAGCAGTATGCG
AAAGAGCATTTCCCAGATCTCTTCGGCAGCACTAAGGGGAGGTAA
Transcript >Hirsu2|4186
ATGCACAACCACCCTTACCAGCAGGCCGACATGGCCCGTCGCAATGAGCGCATGGAGTTCCCCTACGGCGCCCCC
CAGCCCAACATGGGGGCTCAACAGCAGCATCACCCTACGCCCGTCCAGCCGCCCATGAACGTTCCGCAGCAGCCT
CCCAATGCGCAGCCTGGCAGTCAACAGCAGACGCCGACCCAGACACCGGCCCAGCCAAGCCGCCAGCGGAAGCGT
CCGGCCCCCACGGCCCAGTCCCCCGCAACAGGCGCACCTCCGGCTCCGGTTACGCCGAGCCAGGTTCAGCCTCCG
GCCCCGACGCCCCCCGCCCCTCAGTCCGCTCCGCCCGGCCAGGCCCAGGCGCCCGCCGAGGATGCCAACGCCACT
CCGGCCGCGCCGCCGCCTGCCAAGAAGAGCAGGACCAACACGCCATGGACCCCTCAGGAGGAGCTGCGTCTGAAG
CAGATGCGCGACGCCGGCAACAGCTGGGCGGAGATTGCAAAGACCTTTCCCACGAGAACAGAGGGCTCCGTCAAG
AAGCATTGGTACAAGGATATGCACTACGCCGAGTTTGCCGAGGATGAGAGCCAGGCTTTGTTGAACGCGATCAAG
GAGTACGAGAATAATAAGTGGAAGGTCATTGGCCAAAAGGTCGGCAAGCCAGCCAAGGCTTGCGAGCAGTATGCG
AAAGAGCATTTCCCAGATCTCTTCGGCAGCACTAAGGGGAGGTAA
Gene >Hirsu2|4186
ATGCAGTAAGTACAGACACTTGTTTCCTTGTCTCTGGTACCTCGACCCGTCGCCGCCGCTGCCCATCATCCCGTC
TCGTCCTCCCCACGAAGTCACTTCTACCGTCCCGTGTATCCGATGTATATGTATCCGAGCTCGACATCGACCGGC
CATTCTCCCTCCCCCTTCTTTCCGCCTTGGAACCCTGGACGGCCTCTGCCCGACGGGCCTCTCACTGACCCCGTG
TATCACCGCCGGCCCTTCCTCTTCAACAGACGAAGGCTCCTCGCGATGCCCTCCGCCAGCCCTCCCCCCTGCCTC
TGGTTGGACTGAGGTCACAACTTCATGCAATGCAATGCCATGACGGCTCACCGGCAAGACTGCTGACCGGCGTGC
CCAAACAGCAACCACCCTTACCAGCAGGCCGACATGGCCCGTCGCAATGAGCGCATGGAGTTCCCCTACGGCGCC
CCCCAGCCCAACATGGGGGCTCAACAGCAGCATCACCCTACGCCCGTCCAGCCGCCCATGAACGTTCCGCAGCAG
CCTCCCAATGCGCAGCCTGGCAGTCAACAGCAGACGCCGACCCAGACACCGGCCCAGCCAAGCCGCCAGCGGAAG
CGTCCGGCCCCCACGGCCCAGTCCCCCGCAACAGGCGCACCTCCGGCTCCGGTTACGCCGAGCCAGGTTCAGCCT
CCGGCCCCGACGCCCCCCGCCCCTCAGTCCGCTCCGCCCGGCCAGGCCCAGGCGCCCGCCGAGGATGCCAACGCC
ACTCCGGCCGCGCCGCCGCCTGCCAAGAAGAGCAGGACCAACACGCCATGGACCCCTCAGGAGGAGCTGCGTCTG
AAGCAGATGCGCGACGCCGGCAACAGCTGGGCGGAGATTGCAAAGGTACGCCGGTCCCGTACCCGTACCTCATCC
GTCCCCCTTCCACCCCCTCCCTCCCCAGCGGACAAGGCGGCCGGCTAACATGGCGTCCCATCAGACCTTTCCCAC
GAGAACAGAGGGCTCCGTCAAGAAGCATTGGTACAAGGTGGGCCATCTTCCCCGACGACGGCCGCCCTGGCAGGG
ACGACGGCATTCTGACTTGGGGTCCAACAGGATATGCACTACGCCGAGTTTGCCGAGGATGAGGTGAGCGGCCCC
CAAATCCCCCCGTTGTGCGCCCGGGACTCCGACTAACGCGTGCGATTGCAGAGCCAGGCTTTGTTGAACGCGATC
AAGGAGTACGAGAATAATAAGTGGAAGGTCATTGGCCAAAAGGTCGGCAAGCCAGCCAAGGTACGTCACATGGAC
AAGAGGTGGCCCCGGTGGTGAGGAACGGGCTGACATCGAACAGGCTTGCGAGCAGTATGCGAAAGAGCATTTCCC
AGGCATGTTCTCGAAGGCTGGCCGGGAACAAGGGCCGTCGCAGCTAGCACAGCTAGACTAACGCCACATTAGATC
TCTTCGGCAGCACTAAGGGGAGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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