Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|4177
Gene name
LocationContig_215:17838..18808
Strand-
Gene length (bp)970
Transcript length (bp)900
Coding sequence length (bp)900
Protein length (aa) 300

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

Domain # Start End Length
1 217 239 22
2 249 271 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|4177
MSFNSTSSLQQGARLADQFPSHWQASTADGNLTLHGFRRFKTTHLLNLRYLEAEIAEIDHHIYQVGLGLDIEPST
TDRLGLRYCKRDGTMPCTGKTVTRRLVKRLRRLLKDYDEAVMAFNTIMSMDTFALVDDEKLCSLRSDLTLNEMYK
TRLVRIDQTPRTRQDPLQRSIHHLLRLLRFLRLSKASYADPEKASGAAPPWNTGQWSSQNTALIADVISRVCIAA
VTAAFITAPLAVLSHETRKGVQMAIISTLVVAFASVVSVTLRASNLEMMVVSAAYAAIISVFVSNGQQSSQQPV*
Coding >Hirsu2|4177
ATGAGCTTCAACAGCACGTCGTCCCTCCAGCAGGGCGCAAGATTGGCAGACCAGTTCCCCAGCCACTGGCAGGCC
AGCACCGCCGATGGCAACCTTACGCTCCATGGATTCCGTCGCTTCAAGACGACCCACCTCTTAAACCTGCGCTAC
CTCGAGGCCGAGATTGCTGAGATCGATCACCATATTTACCAAGTCGGCCTGGGCCTAGATATCGAGCCCTCCACG
ACCGACCGGCTGGGGTTGAGGTATTGCAAAAGGGACGGAACGATGCCGTGCACAGGGAAAACAGTCACAAGAAGG
CTCGTTAAGCGGCTTCGTCGGTTGTTGAAGGACTACGATGAGGCAGTAATGGCCTTCAACACCATCATGTCCATG
GACACCTTTGCCCTCGTCGACGACGAAAAGCTGTGTAGCCTGCGTTCGGATCTCACCCTGAACGAGATGTACAAG
ACCAGGCTTGTTAGGATCGATCAGACGCCTCGCACCCGTCAGGATCCGCTTCAGCGTTCCATCCACCATCTTCTA
AGGCTCCTCCGATTCCTCCGGCTGTCCAAGGCCTCCTACGCCGACCCGGAGAAGGCTTCGGGCGCGGCACCTCCC
TGGAACACAGGTCAATGGTCTTCCCAGAACACCGCACTGATCGCCGATGTCATCTCCCGCGTCTGCATTGCGGCC
GTGACGGCCGCGTTCATTACAGCACCCCTCGCCGTTTTGTCTCACGAGACCCGAAAGGGTGTTCAGATGGCCATC
ATTTCTACTCTTGTCGTGGCCTTTGCTTCCGTCGTGTCGGTGACGCTGAGGGCATCGAACCTGGAGATGATGGTT
GTTTCTGCGGCATACGCTGCCATCATCTCGGTTTTCGTCTCCAACGGCCAGCAATCGAGCCAGCAGCCGGTTTGA
Transcript >Hirsu2|4177
ATGAGCTTCAACAGCACGTCGTCCCTCCAGCAGGGCGCAAGATTGGCAGACCAGTTCCCCAGCCACTGGCAGGCC
AGCACCGCCGATGGCAACCTTACGCTCCATGGATTCCGTCGCTTCAAGACGACCCACCTCTTAAACCTGCGCTAC
CTCGAGGCCGAGATTGCTGAGATCGATCACCATATTTACCAAGTCGGCCTGGGCCTAGATATCGAGCCCTCCACG
ACCGACCGGCTGGGGTTGAGGTATTGCAAAAGGGACGGAACGATGCCGTGCACAGGGAAAACAGTCACAAGAAGG
CTCGTTAAGCGGCTTCGTCGGTTGTTGAAGGACTACGATGAGGCAGTAATGGCCTTCAACACCATCATGTCCATG
GACACCTTTGCCCTCGTCGACGACGAAAAGCTGTGTAGCCTGCGTTCGGATCTCACCCTGAACGAGATGTACAAG
ACCAGGCTTGTTAGGATCGATCAGACGCCTCGCACCCGTCAGGATCCGCTTCAGCGTTCCATCCACCATCTTCTA
AGGCTCCTCCGATTCCTCCGGCTGTCCAAGGCCTCCTACGCCGACCCGGAGAAGGCTTCGGGCGCGGCACCTCCC
TGGAACACAGGTCAATGGTCTTCCCAGAACACCGCACTGATCGCCGATGTCATCTCCCGCGTCTGCATTGCGGCC
GTGACGGCCGCGTTCATTACAGCACCCCTCGCCGTTTTGTCTCACGAGACCCGAAAGGGTGTTCAGATGGCCATC
ATTTCTACTCTTGTCGTGGCCTTTGCTTCCGTCGTGTCGGTGACGCTGAGGGCATCGAACCTGGAGATGATGGTT
GTTTCTGCGGCATACGCTGCCATCATCTCGGTTTTCGTCTCCAACGGCCAGCAATCGAGCCAGCAGCCGGTTTGA
Gene >Hirsu2|4177
ATGAGCTTCAACAGCACGTCGTCCCTCCAGCAGGGCGCAAGATTGGCAGACCAGTTCCCCAGCCACTGGCAGGCC
AGCACCGCCGATGGCAACCTTACGCTCCATGGATTCCGTCGCTTCAAGACGACCCACCTCTTAAACCTGCGCTAC
CTCGAGGCCGAGATTGCTGAGATCGATCACCATATTTACCAAGTCGGCCTGGGCCTAGATATCGAGCCCTCCACG
ACCGACCGGCTGGGGTTGAGGTATTGCAAAAGGGACGGAACGATGCCGTGCACAGGGAAAACAGTCACAAGAAGG
CTCGTTAAGCGGCTTCGTCGGTTGTTGAAGGACTACGGTACGTACGCACTTTGCACACCCCTCTGAAATCTCGTC
CTGTCCGGAGTCACCGCTTGACGACAAGGCAGATGAGGCAGTAATGGCCTTCAACACCATCATGTCCATGGACAC
CTTTGCCCTCGTCGACGACGAAAAGCTGTGTAGCCTGCGTTCGGATCTCACCCTGAACGAGATGTACAAGACCAG
GCTTGTTAGGATCGATCAGACGCCTCGCACCCGTCAGGATCCGCTTCAGCGTTCCATCCACCATCTTCTAAGGCT
CCTCCGATTCCTCCGGCTGTCCAAGGCCTCCTACGCCGACCCGGAGAAGGCTTCGGGCGCGGCACCTCCCTGGAA
CACAGGTCAATGGTCTTCCCAGAACACCGCACTGATCGCCGATGTCATCTCCCGCGTCTGCATTGCGGCCGTGAC
GGCCGCGTTCATTACAGCACCCCTCGCCGTTTTGTCTCACGAGACCCGAAAGGGTGTTCAGATGGCCATCATTTC
TACTCTTGTCGTGGCCTTTGCTTCCGTCGTGTCGGTGACGCTGAGGGCATCGAACCTGGAGATGATGGTTGTTTC
TGCGGCATACGCTGCCATCATCTCGGTTTTCGTCTCCAACGGCCAGCAATCGAGCCAGCAGCCGGTTTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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