Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|416
Gene name
LocationContig_1082:6331..7236
Strand+
Gene length (bp)905
Transcript length (bp)837
Coding sequence length (bp)837
Protein length (aa) 279

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide 0.0676 0.075 0.0144 0.131 0.2867 0.0373 0.8369 0.381 0.0966 0.2059

SignalP

SignalP signal predicted Location Score
Yes 1 - 19 0.650327

Transmembrane Domains

Domain # Start End Length
1 49 71 22
2 109 128 19

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6964
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|1719
Ophiocordyceps subramaniannii Hirsu2|3529
Ophiocordyceps subramaniannii Hirsu2|416 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|416
MDRVWLTVFLSLVLRFASAAPAHAVNETNTSVQKDEPSWESGPHTRGTLGLFFSCVITLFLCVWTTVHVNIEPTN
EMNYRFSKLCGFAIPYLSNRDLGKILVKSWVRKLGWGLVTLIVPEGSMAIATYERRTAKLLREKMNEIKKDEKEW
DMSLAYYAVMGGFVIPEDVYDDVKVEKEKEKEKNKDERDEKVDIHENKTLTLTPYGVLQVAEWEKGGPPLLCITS
EEVRDKGNASSVAKVLVFWQVFWMILQVIGRAVTRLPVTLLELHTVLHTFCAS*
Coding >Hirsu2|416
ATGGATAGAGTCTGGCTTACGGTCTTCCTTTCACTCGTCCTTCGATTCGCGAGCGCCGCGCCAGCGCACGCTGTC
AACGAGACGAACACGTCCGTCCAAAAGGACGAACCGTCGTGGGAATCAGGACCTCACACGCGTGGCACCCTGGGT
CTTTTCTTTAGCTGCGTCATCACATTGTTCCTCTGCGTCTGGACCACGGTCCATGTCAACATCGAGCCGACAAAC
GAGATGAACTACAGGTTCAGCAAGCTCTGTGGCTTCGCCATTCCGTATCTCAGCAATAGAGACCTTGGCAAAATT
CTGGTCAAGTCATGGGTCCGGAAGCTCGGCTGGGGTCTTGTAACCCTTATTGTACCTGAAGGCTCGATGGCCATT
GCGACATACGAGAGAAGAACCGCCAAACTCCTCCGCGAAAAGATGAACGAAATCAAGAAGGATGAGAAGGAGTGG
GACATGTCACTAGCTTATTACGCTGTCATGGGAGGGTTTGTCATTCCGGAAGATGTCTATGACGACGTCAAGGTG
GAGAAGGAGAAGGAGAAGGAGAAGAACAAGGACGAAAGAGACGAAAAGGTGGACATTCATGAAAACAAGACTCTT
ACTCTTACCCCTTACGGAGTCCTTCAGGTGGCAGAGTGGGAGAAGGGTGGGCCCCCGCTGCTGTGCATTACATCC
GAAGAGGTGCGTGACAAGGGCAATGCCAGCTCTGTTGCGAAAGTCCTCGTTTTCTGGCAGGTGTTTTGGATGATA
CTCCAGGTCATCGGCCGGGCCGTTACGAGGTTACCTGTGACGCTGCTCGAGCTACATACCGTCTTGCACACATTC
TGTGCGTCATGA
Transcript >Hirsu2|416
ATGGATAGAGTCTGGCTTACGGTCTTCCTTTCACTCGTCCTTCGATTCGCGAGCGCCGCGCCAGCGCACGCTGTC
AACGAGACGAACACGTCCGTCCAAAAGGACGAACCGTCGTGGGAATCAGGACCTCACACGCGTGGCACCCTGGGT
CTTTTCTTTAGCTGCGTCATCACATTGTTCCTCTGCGTCTGGACCACGGTCCATGTCAACATCGAGCCGACAAAC
GAGATGAACTACAGGTTCAGCAAGCTCTGTGGCTTCGCCATTCCGTATCTCAGCAATAGAGACCTTGGCAAAATT
CTGGTCAAGTCATGGGTCCGGAAGCTCGGCTGGGGTCTTGTAACCCTTATTGTACCTGAAGGCTCGATGGCCATT
GCGACATACGAGAGAAGAACCGCCAAACTCCTCCGCGAAAAGATGAACGAAATCAAGAAGGATGAGAAGGAGTGG
GACATGTCACTAGCTTATTACGCTGTCATGGGAGGGTTTGTCATTCCGGAAGATGTCTATGACGACGTCAAGGTG
GAGAAGGAGAAGGAGAAGGAGAAGAACAAGGACGAAAGAGACGAAAAGGTGGACATTCATGAAAACAAGACTCTT
ACTCTTACCCCTTACGGAGTCCTTCAGGTGGCAGAGTGGGAGAAGGGTGGGCCCCCGCTGCTGTGCATTACATCC
GAAGAGGTGCGTGACAAGGGCAATGCCAGCTCTGTTGCGAAAGTCCTCGTTTTCTGGCAGGTGTTTTGGATGATA
CTCCAGGTCATCGGCCGGGCCGTTACGAGGTTACCTGTGACGCTGCTCGAGCTACATACCGTCTTGCACACATTC
TGTGCGTCATGA
Gene >Hirsu2|416
ATGGATAGAGTCTGGCTTACGGTCTTCCTTTCACTCGTCCTTCGATTCGCGAGCGCCGCGCCAGCGCACGCTGTC
AACGAGACGAACACGTCCGTCCAAAAGGACGAACCGTCGTGGGAATCAGGACCTCACACGCGTGGCACCCTGGGT
CTTTTCTTTAGCTGCGTCATCACATTGTTCCTCTGCGTCTGGACCACGGTCCATGTCAACATCGAGCCGACAAAC
GAGATGAACTACAGGTTCAGCAAGCTCTGTGGCTTCGCCATTCCGTATCTCAGCAATAGAGACCTTGGCAAAATT
CTGGTCAAGTCATGGGTCCGGAAGCTCGGCTGGGGTCTTGTAACCCTTATTGTACCTGAAGGCTCGATGGCCATT
GCGACATACGAGAGAAGAACCGCCAAACTCCTCCGCGAAAAGATGAACGAAATCAAGAAGGATGAGAAGGAGTGG
GACATGTCACTAGCTTATTACGCTGTCATGGGAGGGTTTGTCATTCCGGAAGATGTCTATGACGACGTCAAGGTG
GAGAAGGAGAAGGAGAAGGAGAAGAACAAGGACGAAAGAGACGAAAAGGTGGACATTCATGAAAACAAGACTCTT
ACTCTTACCCCTTACGGAGTCCTTCAGGTGGCAGAGTGGGAGAAGGGTGGGCCCCCGCTGCTGTGCATTACATCC
GAAGAGGTGCGTGACAAGGGCAATGCCAGCTCTGTTGCGAAAGTCCTCGTTTTCTGGCAGGTGTTTTGGATGATA
CTCCAGGTCATCGGCCGGGCCGTTACGAGGTTACCTGTGACGCTGCTCGAGCTACATACCGTCTTGCACACATTC
TGTGCGGTGGCTATGTACGCAACGTGGTGGAGCAAGCCAGTCGACATCGACAACCCAACCGTCGTTTCTCTCAGT
CATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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