Protein ID | Hirsu2|4156 |
Gene name | |
Location | Contig_2142:100..1318 |
Strand | - |
Gene length (bp) | 1218 |
Transcript length (bp) | 1218 |
Coding sequence length (bp) | 1218 |
Protein length (aa) | 406 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1627 | 0.0778 | 0.9137 | 0.227 | 0.1076 | 0.0228 | 0.1681 | 0.2888 | 0.122 | 0.0027 |
Orthofinder run ID | 4 |
Orthogroup | 29 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|4156 MKLAGLGAALFALGAFCNNEIPMQLPHTERANKLRAELSKRIIVDKENPPIHTKKWNWPICKFFSWWLDGCHFDG VTFIEKRSFRQQDLKTEVFIRREVIQRVTNFAEESSSVHRSKTTVRFNQNTLGWTGGAQLQLYNALSISGSVAYH STKGTQVMETEAATFPCPARTRCWSELWIPHVRLSGSCYIRPSTVCGRFKGNPCTYDEYGYWVNNTGRMVRLDIR WYHGMPFIGGKCNIDDWTDAVCLTNTSDKERRETPRLDENCQVTFSVMEGSRPYTEDHWFTSPLDPPPKITGYLA GVYLLGSKDLIYDPHRSRDRYRSNDQWYTIPGYPKLDISKWKHKQPVALRVQKKTEYGTCYQLDTEEFFCPDAPG EAKYFTDRKRYYAKPKEAPEPSIPQYWENL* |
Coding | >Hirsu2|4156 ATGAAGCTTGCAGGCCTTGGGGCTGCCCTGTTCGCCTTGGGCGCTTTTTGCAACAACGAAATACCGATGCAGCTC CCCCATACAGAAAGAGCGAACAAGCTGAGAGCGGAATTGAGCAAGCGAATCATAGTCGACAAGGAGAACCCTCCA ATCCACACGAAGAAGTGGAACTGGCCGATATGCAAATTTTTTTCGTGGTGGCTCGACGGTTGTCATTTCGATGGC GTTACCTTTATCGAGAAAAGAAGTTTTCGACAGCAGGACCTCAAGACGGAAGTCTTTATCCGGAGAGAGGTTATC CAGAGAGTTACCAACTTCGCCGAGGAGAGTTCAAGCGTTCACAGATCGAAGACTACCGTGCGCTTCAACCAAAAT ACCCTTGGCTGGACAGGTGGGGCTCAATTGCAGCTTTATAACGCCCTCAGCATCTCGGGGTCGGTCGCATACCAT TCTACAAAGGGGACCCAGGTAATGGAAACCGAGGCTGCCACTTTTCCGTGCCCGGCTCGCACAAGATGTTGGTCC GAGCTCTGGATCCCTCATGTCCGACTGTCGGGATCCTGCTATATTAGGCCGAGTACGGTTTGCGGCAGGTTCAAA GGAAACCCATGTACCTATGACGAGTACGGGTACTGGGTTAACAATACAGGGCGCATGGTTCGCCTAGACATCCGA TGGTATCACGGTATGCCTTTTATCGGTGGGAAATGTAATATCGACGACTGGACTGACGCCGTCTGTCTGACGAAT ACGAGTGACAAGGAGCGCCGGGAGACCCCCCGCTTGGATGAGAATTGCCAAGTTACATTCTCCGTCATGGAAGGC TCGCGACCTTACACCGAGGACCACTGGTTCACAAGTCCGCTAGATCCGCCGCCTAAGATCACGGGATACTTGGCC GGTGTATACCTTCTCGGCTCGAAGGATCTGATATATGACCCGCATAGATCACGTGATCGATACCGCAGTAATGAT CAGTGGTACACTATTCCGGGTTATCCTAAATTGGATATCTCAAAATGGAAGCACAAGCAGCCTGTGGCCCTTAGG GTACAAAAGAAGACAGAGTACGGTACATGCTATCAGCTCGACACTGAAGAGTTCTTCTGTCCTGATGCACCGGGA GAGGCGAAGTACTTCACAGATCGCAAGAGATATTATGCCAAGCCAAAGGAGGCCCCCGAGCCCTCAATCCCACAG TACTGGGAAAATCTGTGA |
Transcript | >Hirsu2|4156 ATGAAGCTTGCAGGCCTTGGGGCTGCCCTGTTCGCCTTGGGCGCTTTTTGCAACAACGAAATACCGATGCAGCTC CCCCATACAGAAAGAGCGAACAAGCTGAGAGCGGAATTGAGCAAGCGAATCATAGTCGACAAGGAGAACCCTCCA ATCCACACGAAGAAGTGGAACTGGCCGATATGCAAATTTTTTTCGTGGTGGCTCGACGGTTGTCATTTCGATGGC GTTACCTTTATCGAGAAAAGAAGTTTTCGACAGCAGGACCTCAAGACGGAAGTCTTTATCCGGAGAGAGGTTATC CAGAGAGTTACCAACTTCGCCGAGGAGAGTTCAAGCGTTCACAGATCGAAGACTACCGTGCGCTTCAACCAAAAT ACCCTTGGCTGGACAGGTGGGGCTCAATTGCAGCTTTATAACGCCCTCAGCATCTCGGGGTCGGTCGCATACCAT TCTACAAAGGGGACCCAGGTAATGGAAACCGAGGCTGCCACTTTTCCGTGCCCGGCTCGCACAAGATGTTGGTCC GAGCTCTGGATCCCTCATGTCCGACTGTCGGGATCCTGCTATATTAGGCCGAGTACGGTTTGCGGCAGGTTCAAA GGAAACCCATGTACCTATGACGAGTACGGGTACTGGGTTAACAATACAGGGCGCATGGTTCGCCTAGACATCCGA TGGTATCACGGTATGCCTTTTATCGGTGGGAAATGTAATATCGACGACTGGACTGACGCCGTCTGTCTGACGAAT ACGAGTGACAAGGAGCGCCGGGAGACCCCCCGCTTGGATGAGAATTGCCAAGTTACATTCTCCGTCATGGAAGGC TCGCGACCTTACACCGAGGACCACTGGTTCACAAGTCCGCTAGATCCGCCGCCTAAGATCACGGGATACTTGGCC GGTGTATACCTTCTCGGCTCGAAGGATCTGATATATGACCCGCATAGATCACGTGATCGATACCGCAGTAATGAT CAGTGGTACACTATTCCGGGTTATCCTAAATTGGATATCTCAAAATGGAAGCACAAGCAGCCTGTGGCCCTTAGG GTACAAAAGAAGACAGAGTACGGTACATGCTATCAGCTCGACACTGAAGAGTTCTTCTGTCCTGATGCACCGGGA GAGGCGAAGTACTTCACAGATCGCAAGAGATATTATGCCAAGCCAAAGGAGGCCCCCGAGCCCTCAATCCCACAG TACTGGGAAAATCTGTGA |
Gene | >Hirsu2|4156 ATGAAGCTTGCAGGCCTTGGGGCTGCCCTGTTCGCCTTGGGCGCTTTTTGCAACAACGAAATACCGATGCAGCTC CCCCATACAGAAAGAGCGAACAAGCTGAGAGCGGAATTGAGCAAGCGAATCATAGTCGACAAGGAGAACCCTCCA ATCCACACGAAGAAGTGGAACTGGCCGATATGCAAATTTTTTTCGTGGTGGCTCGACGGTTGTCATTTCGATGGC GTTACCTTTATCGAGAAAAGAAGTTTTCGACAGCAGGACCTCAAGACGGAAGTCTTTATCCGGAGAGAGGTTATC CAGAGAGTTACCAACTTCGCCGAGGAGAGTTCAAGCGTTCACAGATCGAAGACTACCGTGCGCTTCAACCAAAAT ACCCTTGGCTGGACAGGTGGGGCTCAATTGCAGCTTTATAACGCCCTCAGCATCTCGGGGTCGGTCGCATACCAT TCTACAAAGGGGACCCAGGTAATGGAAACCGAGGCTGCCACTTTTCCGTGCCCGGCTCGCACAAGATGTTGGTCC GAGCTCTGGATCCCTCATGTCCGACTGTCGGGATCCTGCTATATTAGGCCGAGTACGGTTTGCGGCAGGTTCAAA GGAAACCCATGTACCTATGACGAGTACGGGTACTGGGTTAACAATACAGGGCGCATGGTTCGCCTAGACATCCGA TGGTATCACGGTATGCCTTTTATCGGTGGGAAATGTAATATCGACGACTGGACTGACGCCGTCTGTCTGACGAAT ACGAGTGACAAGGAGCGCCGGGAGACCCCCCGCTTGGATGAGAATTGCCAAGTTACATTCTCCGTCATGGAAGGC TCGCGACCTTACACCGAGGACCACTGGTTCACAAGTCCGCTAGATCCGCCGCCTAAGATCACGGGATACTTGGCC GGTGTATACCTTCTCGGCTCGAAGGATCTGATATATGACCCGCATAGATCACGTGATCGATACCGCAGTAATGAT CAGTGGTACACTATTCCGGGTTATCCTAAATTGGATATCTCAAAATGGAAGCACAAGCAGCCTGTGGCCCTTAGG GTACAAAAGAAGACAGAGTACGGTACATGCTATCAGCTCGACACTGAAGAGTTCTTCTGTCCTGATGCACCGGGA GAGGCGAAGTACTTCACAGATCGCAAGAGATATTATGCCAAGCCAAAGGAGGCCCCCGAGCCCTCAATCCCACAG TACTGGGAAAATCTGTGA |